RNA–Protein interactions for RNA: ENST00000589309.5

PRKAR1A-218, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 3

Gene PRKAR1A, Length 407 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-218ENST00000589309 NISCHQ9Y2I1 1504 aa32.36■■■□□ 2.77
PRKAR1A-218ENST00000589309 CCDC180Q9P1Z9 1646 aa28.91■■■□□ 2.22
PRKAR1A-218ENST00000589309 ABCC9O60706 1549 aa28.77■■■□□ 2.2
PRKAR1A-218ENST00000589309 RB1CC1Q8TDY2 1594 aa27.5■■□□□ 1.99
PRKAR1A-218ENST00000589309 DCAF8L2P0C7V8 631 aa27.39■■□□□ 1.98
PRKAR1A-218ENST00000589309 NACADO15069 1562 aa27.37■■□□□ 1.97
PRKAR1A-218ENST00000589309 MYO15BQ96JP2 1530 aa27.09■■□□□ 1.93
PRKAR1A-218ENST00000589309 PABPN1Q86U42 306 aaKnown RBP eCLIP26.87■■□□□ 1.89
PRKAR1A-218ENST00000589309 DNAJC5BQ9UF47 199 aa26.83■■□□□ 1.89
PRKAR1A-218ENST00000589309 ZCCHC6Q5VYS8 1495 aaKnown RBP26.82■■□□□ 1.88
PRKAR1A-218ENST00000589309 DCAF1Q9Y4B6 1507 aa26.78■■□□□ 1.88
PRKAR1A-218ENST00000589309 UNC13AQ9UPW8 1703 aa26.66■■□□□ 1.86
PRKAR1A-218ENST00000589309 BICRAQ9NZM4 1560 aa26.58■■□□□ 1.85
PRKAR1A-218ENST00000589309 SHROOM4Q9ULL8 1493 aa26.4■■□□□ 1.82
PRKAR1A-218ENST00000589309 SCRIBQ14160 1630 aa26.32■■□□□ 1.8
PRKAR1A-218ENST00000589309 EIF4G1Q04637 1599 aaKnown RBP25.97■■□□□ 1.75
PRKAR1A-218ENST00000589309 CC2D2AQ9P2K1 1620 aa25.96■■□□□ 1.75
PRKAR1A-218ENST00000589309 CECR2Q9BXF3 1484 aa25.94■■□□□ 1.74
PRKAR1A-218ENST00000589309 NCAPD3P42695 1498 aa25.29■■□□□ 1.64
PRKAR1A-218ENST00000589309 ATAD2BQ9ULI0 1458 aa25.2■■□□□ 1.62
PRKAR1A-218ENST00000589309 SMARCA2P51531 1590 aa25.16■■□□□ 1.62
PRKAR1A-218ENST00000589309 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
PRKAR1A-218ENST00000589309 BAZ1AQ9NRL2 1556 aaPredicted RBP25.14■■□□□ 1.61
PRKAR1A-218ENST00000589309 HMGXB3Q12766 1538 aa25.06■■□□□ 1.6
PRKAR1A-218ENST00000589309 BAZ1BQ9UIG0 1483 aaKnown RBP24.97■■□□□ 1.59
PRKAR1A-218ENST00000589309 PEG3Q9GZU2 1588 aa24.94■■□□□ 1.58
PRKAR1A-218ENST00000589309 ERCC6Q03468 1493 aa24.89■■□□□ 1.58
PRKAR1A-218ENST00000589309 MROH2BQ7Z745 1585 aa24.89■■□□□ 1.58
PRKAR1A-218ENST00000589309 CUX2O14529 1486 aa24.78■■□□□ 1.56
PRKAR1A-218ENST00000589309 NESP48681 1621 aa24.72■■□□□ 1.55
PRKAR1A-218ENST00000589309 LAMC3Q9Y6N6 1575 aa24.65■■□□□ 1.54
PRKAR1A-218ENST00000589309 DNAJC5Q9H3Z4 198 aa24.63■■□□□ 1.53
PRKAR1A-218ENST00000589309 PDS5BQ9NTI5 1447 aa24.61■■□□□ 1.53
PRKAR1A-218ENST00000589309 CADPSQ9ULU8 1353 aa24.56■■□□□ 1.52
PRKAR1A-218ENST00000589309 WIZO95785 1651 aa24.56■■□□□ 1.52
PRKAR1A-218ENST00000589309 RSF1Q96T23 1441 aaPredicted RBP24.51■■□□□ 1.51
PRKAR1A-218ENST00000589309 THOC2Q8NI27 1593 aaKnown RBP24.38■■□□□ 1.49
PRKAR1A-218ENST00000589309 KIF21AQ7Z4S6 1674 aa24.34■■□□□ 1.49
PRKAR1A-218ENST00000589309 TOP2AP11388 1531 aaKnown RBP24.33■■□□□ 1.49
PRKAR1A-218ENST00000589309 MRC2Q9UBG0 1479 aa24.28■■□□□ 1.48
PRKAR1A-218ENST00000589309 CFTRP13569 1480 aa24.27■■□□□ 1.48
PRKAR1A-218ENST00000589309 CEP164Q9UPV0 1460 aa24.23■■□□□ 1.47
PRKAR1A-218ENST00000589309 FANCD2Q9BXW9 1451 aa24.22■■□□□ 1.47
PRKAR1A-218ENST00000589309 WDR62O43379 1518 aa24.17■■□□□ 1.46
PRKAR1A-218ENST00000589309 CCDC88BA6NC98 1476 aa24.08■■□□□ 1.45
PRKAR1A-218ENST00000589309 URB2Q14146 1524 aaKnown RBP23.94■■□□□ 1.42
PRKAR1A-218ENST00000589309 PRDM2Q13029 1718 aa23.87■■□□□ 1.41
PRKAR1A-218ENST00000589309 ABCC8Q09428 1581 aa23.85■■□□□ 1.41
PRKAR1A-218ENST00000589309 OSCARQ8IYS5 282 aa23.8■■□□□ 1.4
PRKAR1A-218ENST00000589309 IFT140Q96RY7 1462 aa23.78■■□□□ 1.4
PRKAR1A-218ENST00000589309 TOPBP1Q92547 1522 aa23.75■■□□□ 1.39
PRKAR1A-218ENST00000589309 DNMBPQ6XZF7 1577 aa23.68■■□□□ 1.38
PRKAR1A-218ENST00000589309 SUPT5HO00267 1087 aaKnown RBP23.64■■□□□ 1.37
PRKAR1A-218ENST00000589309 ZNF608Q9ULD9 1512 aaPredicted RBP23.62■■□□□ 1.37
PRKAR1A-218ENST00000589309 TRIM41Q8WV44 630 aa23.59■■□□□ 1.37
PRKAR1A-218ENST00000589309 POLA1P09884 1462 aaPredicted RBP23.52■■□□□ 1.36
PRKAR1A-218ENST00000589309 SOGA1O94964 1423 aa23.5■■□□□ 1.35
PRKAR1A-218ENST00000589309 AQRO60306 1485 aaKnown RBP eCLIP23.49■■□□□ 1.35
PRKAR1A-218ENST00000589309 TARBP1Q13395 1621 aaKnown RBP23.48■■□□□ 1.35
PRKAR1A-218ENST00000589309 EIF4G3O43432 1585 aaKnown RBP23.46■■□□□ 1.35
PRKAR1A-218ENST00000589309 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
PRKAR1A-218ENST00000589309 FBLN2P98095 1184 aa23.41■■□□□ 1.34
PRKAR1A-218ENST00000589309 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
PRKAR1A-218ENST00000589309 FGD5Q6ZNL6 1462 aa23.4■■□□□ 1.34
PRKAR1A-218ENST00000589309 CUX1P39880 1505 aa23.37■■□□□ 1.33
PRKAR1A-218ENST00000589309 WDR97A6NE52 1622 aa23.34■■□□□ 1.33
PRKAR1A-218ENST00000589309 CHMP7Q8WUX9 453 aaPredicted RBP23.3■■□□□ 1.32
PRKAR1A-218ENST00000589309 GRIN2BQ13224 1484 aa23.26■■□□□ 1.31
PRKAR1A-218ENST00000589309 RIMBP3CA6NJZ7 1639 aa23.24■■□□□ 1.31
PRKAR1A-218ENST00000589309 RIMBP3BA6NNM3 1639 aa23.24■■□□□ 1.31
PRKAR1A-218ENST00000589309 RIMBP3Q9UFD9 1639 aa23.24■■□□□ 1.31
PRKAR1A-218ENST00000589309 ARHGEF11O15085 1522 aa23.23■■□□□ 1.31
PRKAR1A-218ENST00000589309 SNAPC4Q5SXM2 1469 aa23.23■■□□□ 1.31
PRKAR1A-218ENST00000589309 MAGI1Q96QZ7 1491 aaPredicted RBP23.23■■□□□ 1.31
PRKAR1A-218ENST00000589309 CHD1O14646 1710 aa23.21■■□□□ 1.31
PRKAR1A-218ENST00000589309 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.3
PRKAR1A-218ENST00000589309 GAPVD1Q14C86 1478 aa23.18■■□□□ 1.3
PRKAR1A-218ENST00000589309 CYB5RLQ6IPT4 315 aa23.18■■□□□ 1.3
PRKAR1A-218ENST00000589309 ABCA10Q8WWZ4 1543 aa23.18■■□□□ 1.3
PRKAR1A-218ENST00000589309 SYNJ2O15056 1496 aa23.15■■□□□ 1.3
PRKAR1A-218ENST00000589309 SYNJ1O43426 1573 aa23.1■■□□□ 1.29
PRKAR1A-218ENST00000589309 TOP2BQ02880 1626 aa23.07■■□□□ 1.28
PRKAR1A-218ENST00000589309 ABCA5Q8WWZ7 1642 aa23.03■■□□□ 1.28
PRKAR1A-218ENST00000589309 BIVM-ERCC5R4GMW8 1640 aa23.03■■□□□ 1.28
PRKAR1A-218ENST00000589309 CLASP1Q7Z460 1538 aa23.02■■□□□ 1.28
PRKAR1A-218ENST00000589309 PBRM1Q86U86 1689 aa23.01■■□□□ 1.27
PRKAR1A-218ENST00000589309 ARAP1Q96P48 1450 aa23■■□□□ 1.27
PRKAR1A-218ENST00000589309 FHAD1B1AJZ9 1412 aa22.93■■□□□ 1.26
PRKAR1A-218ENST00000589309 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
PRKAR1A-218ENST00000589309 TRHP20396 242 aaPredicted RBP22.9■■□□□ 1.26
PRKAR1A-218ENST00000589309 ERICH3Q5RHP9 1530 aa22.9■■□□□ 1.26
PRKAR1A-218ENST00000589309 ADAMTS12P58397 1594 aa22.84■■□□□ 1.25
PRKAR1A-218ENST00000589309 NUP160Q12769 1436 aa22.83■■□□□ 1.25
PRKAR1A-218ENST00000589309 CEP170Q5SW79 1584 aa22.75■■□□□ 1.23
PRKAR1A-218ENST00000589309 KIF27Q86VH2 1401 aa22.74■■□□□ 1.23
PRKAR1A-218ENST00000589309 JPH4Q96JJ6 628 aa22.72■■□□□ 1.23
PRKAR1A-218ENST00000589309 IGF1RP08069 1367 aa22.69■■□□□ 1.22
PRKAR1A-218ENST00000589309 PRG4Q92954 1404 aaPredicted RBP22.65■■□□□ 1.22
PRKAR1A-218ENST00000589309 SHROOM2Q13796 1616 aa22.64■■□□□ 1.22
PRKAR1A-218ENST00000589309 ERCC6L2Q5T890 1561 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms