RNA–Protein interactions for RNA: ENST00000589174.1

MRPL54-202, Transcript of mitochondrial ribosomal protein L54, humanhuman

TSL 3

Gene MRPL54, Length 491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-202ENST00000589174 NISCHQ9Y2I1 1504 aa28.16■■■□□ 2.1
MRPL54-202ENST00000589174 ABCC9O60706 1549 aa25.34■■□□□ 1.65
MRPL54-202ENST00000589174 CCDC180Q9P1Z9 1646 aa25.27■■□□□ 1.64
MRPL54-202ENST00000589174 RB1CC1Q8TDY2 1594 aa24.02■■□□□ 1.44
MRPL54-202ENST00000589174 DNAJC5BQ9UF47 199 aa23.93■■□□□ 1.42
MRPL54-202ENST00000589174 NACADO15069 1562 aa23.86■■□□□ 1.41
MRPL54-202ENST00000589174 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.39
MRPL54-202ENST00000589174 DCAF8L2P0C7V8 631 aa23.61■■□□□ 1.37
MRPL54-202ENST00000589174 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
MRPL54-202ENST00000589174 MYO15BQ96JP2 1530 aa23.52■■□□□ 1.36
MRPL54-202ENST00000589174 BICRAQ9NZM4 1560 aa23.52■■□□□ 1.36
MRPL54-202ENST00000589174 ZCCHC6Q5VYS8 1495 aaKnown RBP23.35■■□□□ 1.33
MRPL54-202ENST00000589174 DCAF1Q9Y4B6 1507 aa23.22■■□□□ 1.31
MRPL54-202ENST00000589174 SCRIBQ14160 1630 aa23.06■■□□□ 1.28
MRPL54-202ENST00000589174 SHROOM4Q9ULL8 1493 aa22.96■■□□□ 1.27
MRPL54-202ENST00000589174 CC2D2AQ9P2K1 1620 aa22.92■■□□□ 1.26
MRPL54-202ENST00000589174 EIF4G1Q04637 1599 aaKnown RBP22.84■■□□□ 1.25
MRPL54-202ENST00000589174 CECR2Q9BXF3 1484 aa22.79■■□□□ 1.24
MRPL54-202ENST00000589174 NCAPD3P42695 1498 aa22.05■■□□□ 1.12
MRPL54-202ENST00000589174 ATAD2BQ9ULI0 1458 aa22.01■■□□□ 1.11
MRPL54-202ENST00000589174 SMARCA4P51532 1647 aa21.99■■□□□ 1.11
MRPL54-202ENST00000589174 HMGXB3Q12766 1538 aa21.89■■□□□ 1.09
MRPL54-202ENST00000589174 SMARCA2P51531 1590 aa21.87■■□□□ 1.09
MRPL54-202ENST00000589174 DNAJC5Q9H3Z4 198 aa21.85■■□□□ 1.09
MRPL54-202ENST00000589174 NESP48681 1621 aa21.83■■□□□ 1.08
MRPL54-202ENST00000589174 BAZ1AQ9NRL2 1556 aaPredicted RBP21.79■■□□□ 1.08
MRPL54-202ENST00000589174 PEG3Q9GZU2 1588 aa21.78■■□□□ 1.08
MRPL54-202ENST00000589174 CUX2O14529 1486 aa21.77■■□□□ 1.08
MRPL54-202ENST00000589174 MROH2BQ7Z745 1585 aa21.75■■□□□ 1.07
MRPL54-202ENST00000589174 ERCC6Q03468 1493 aa21.75■■□□□ 1.07
MRPL54-202ENST00000589174 BAZ1BQ9UIG0 1483 aaKnown RBP21.72■■□□□ 1.07
MRPL54-202ENST00000589174 THOC2Q8NI27 1593 aaKnown RBP21.62■■□□□ 1.05
MRPL54-202ENST00000589174 KIF21AQ7Z4S6 1674 aa21.55■■□□□ 1.04
MRPL54-202ENST00000589174 LAMC3Q9Y6N6 1575 aa21.54■■□□□ 1.04
MRPL54-202ENST00000589174 WIZO95785 1651 aa21.5■■□□□ 1.03
MRPL54-202ENST00000589174 CADPSQ9ULU8 1353 aa21.35■■□□□ 1.01
MRPL54-202ENST00000589174 PDS5BQ9NTI5 1447 aa21.33■■□□□ 1.01
MRPL54-202ENST00000589174 WDR62O43379 1518 aa21.24■□□□□ 0.99
MRPL54-202ENST00000589174 MRC2Q9UBG0 1479 aa21.24■□□□□ 0.99
MRPL54-202ENST00000589174 RSF1Q96T23 1441 aaPredicted RBP21.23■□□□□ 0.99
MRPL54-202ENST00000589174 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.98
MRPL54-202ENST00000589174 CFTRP13569 1480 aa21.13■□□□□ 0.97
MRPL54-202ENST00000589174 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
MRPL54-202ENST00000589174 CEP164Q9UPV0 1460 aa21.12■□□□□ 0.97
MRPL54-202ENST00000589174 URB2Q14146 1524 aaKnown RBP21.04■□□□□ 0.96
MRPL54-202ENST00000589174 PRDM2Q13029 1718 aa20.98■□□□□ 0.95
MRPL54-202ENST00000589174 CCDC88BA6NC98 1476 aa20.93■□□□□ 0.94
MRPL54-202ENST00000589174 TRIM41Q8WV44 630 aa20.82■□□□□ 0.92
MRPL54-202ENST00000589174 ZNF608Q9ULD9 1512 aaPredicted RBP20.8■□□□□ 0.92
MRPL54-202ENST00000589174 TOPBP1Q92547 1522 aa20.76■□□□□ 0.91
MRPL54-202ENST00000589174 OSCARQ8IYS5 282 aa20.7■□□□□ 0.9
MRPL54-202ENST00000589174 IFT140Q96RY7 1462 aa20.69■□□□□ 0.9
MRPL54-202ENST00000589174 EIF4G3O43432 1585 aaKnown RBP20.65■□□□□ 0.9
MRPL54-202ENST00000589174 DNMBPQ6XZF7 1577 aa20.65■□□□□ 0.9
MRPL54-202ENST00000589174 TARBP1Q13395 1621 aaKnown RBP20.64■□□□□ 0.89
MRPL54-202ENST00000589174 RIMBP3CA6NJZ7 1639 aa20.62■□□□□ 0.89
MRPL54-202ENST00000589174 RIMBP3BA6NNM3 1639 aa20.62■□□□□ 0.89
MRPL54-202ENST00000589174 RIMBP3Q9UFD9 1639 aa20.62■□□□□ 0.89
MRPL54-202ENST00000589174 ABCC8Q09428 1581 aa20.56■□□□□ 0.88
MRPL54-202ENST00000589174 CHD1O14646 1710 aa20.55■□□□□ 0.88
MRPL54-202ENST00000589174 AQRO60306 1485 aaKnown RBP eCLIP20.55■□□□□ 0.88
MRPL54-202ENST00000589174 POLA1P09884 1462 aaPredicted RBP20.55■□□□□ 0.88
MRPL54-202ENST00000589174 ARHGEF11O15085 1522 aa20.52■□□□□ 0.87
MRPL54-202ENST00000589174 RAD54L2Q9Y4B4 1467 aa20.5■□□□□ 0.87
MRPL54-202ENST00000589174 CUX1P39880 1505 aa20.43■□□□□ 0.86
MRPL54-202ENST00000589174 FGD5Q6ZNL6 1462 aa20.4■□□□□ 0.86
MRPL54-202ENST00000589174 TDRD9Q8NDG6 1382 aaKnown RBP20.39■□□□□ 0.85
MRPL54-202ENST00000589174 SOGA1O94964 1423 aa20.37■□□□□ 0.85
MRPL54-202ENST00000589174 WDR97A6NE52 1622 aa20.36■□□□□ 0.85
MRPL54-202ENST00000589174 ARAP1Q96P48 1450 aa20.35■□□□□ 0.85
MRPL54-202ENST00000589174 SNAPC4Q5SXM2 1469 aa20.32■□□□□ 0.84
MRPL54-202ENST00000589174 CLASP1Q7Z460 1538 aa20.29■□□□□ 0.84
MRPL54-202ENST00000589174 CYB5RLQ6IPT4 315 aa20.28■□□□□ 0.84
MRPL54-202ENST00000589174 FBLN2P98095 1184 aa20.27■□□□□ 0.84
MRPL54-202ENST00000589174 PBRM1Q86U86 1689 aa20.23■□□□□ 0.83
MRPL54-202ENST00000589174 MAGI1Q96QZ7 1491 aaPredicted RBP20.21■□□□□ 0.83
MRPL54-202ENST00000589174 GRIN2BQ13224 1484 aa20.2■□□□□ 0.82
MRPL54-202ENST00000589174 ABCA5Q8WWZ7 1642 aa20.19■□□□□ 0.82
MRPL54-202ENST00000589174 SYNJ2O15056 1496 aa20.16■□□□□ 0.82
MRPL54-202ENST00000589174 ABCA10Q8WWZ4 1543 aa20.15■□□□□ 0.82
MRPL54-202ENST00000589174 SYNJ1O43426 1573 aa20.15■□□□□ 0.82
MRPL54-202ENST00000589174 GAPVD1Q14C86 1478 aa20.14■□□□□ 0.81
MRPL54-202ENST00000589174 SUPT5HO00267 1087 aaKnown RBP20.14■□□□□ 0.81
MRPL54-202ENST00000589174 CHMP7Q8WUX9 453 aaPredicted RBP20.1■□□□□ 0.81
MRPL54-202ENST00000589174 BIVM-ERCC5R4GMW8 1640 aa20.07■□□□□ 0.8
MRPL54-202ENST00000589174 ERCC6L2Q5T890 1561 aa20.05■□□□□ 0.8
MRPL54-202ENST00000589174 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
MRPL54-202ENST00000589174 ADAMTS12P58397 1594 aa20.02■□□□□ 0.8
MRPL54-202ENST00000589174 CEP170Q5SW79 1584 aa20■□□□□ 0.79
MRPL54-202ENST00000589174 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
MRPL54-202ENST00000589174 TRHP20396 242 aaPredicted RBP19.98■□□□□ 0.79
MRPL54-202ENST00000589174 WRNQ14191 1432 aaPredicted RBP eCLIP19.96■□□□□ 0.79
MRPL54-202ENST00000589174 NUP160Q12769 1436 aa19.95■□□□□ 0.78
MRPL54-202ENST00000589174 SHROOM2Q13796 1616 aa19.91■□□□□ 0.78
MRPL54-202ENST00000589174 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
MRPL54-202ENST00000589174 FHAD1B1AJZ9 1412 aa19.86■□□□□ 0.77
MRPL54-202ENST00000589174 RUSC2Q8N2Y8 1516 aa19.75■□□□□ 0.75
MRPL54-202ENST00000589174 KIF13AQ9H1H9 1805 aa19.72■□□□□ 0.75
MRPL54-202ENST00000589174 PRG4Q92954 1404 aaPredicted RBP19.7■□□□□ 0.74
MRPL54-202ENST00000589174 JPH4Q96JJ6 628 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms