RNA–Protein interactions for RNA: ENST00000589167.1

NEDD4L-226, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-226ENST00000589167 AEBP2Q6ZN18 517 aaPredicted RBP23.53■■□□□ 1.36
NEDD4L-226ENST00000589167 CHIC1Q5VXU3 224 aa22.42■■□□□ 1.18
NEDD4L-226ENST00000589167 SENP3Q9H4L4 574 aaPredicted RBP20.01■□□□□ 0.79
NEDD4L-226ENST00000589167 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
NEDD4L-226ENST00000589167 FOXD1Q16676 465 aa18.68■□□□□ 0.58
NEDD4L-226ENST00000589167 POTEDQ86YR6 584 aa18.09■□□□□ 0.49
NEDD4L-226ENST00000589167 PLPPR3Q6T4P5 718 aa17.96■□□□□ 0.47
NEDD4L-226ENST00000589167 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
NEDD4L-226ENST00000589167 ADRA2BP18089 450 aa17.53■□□□□ 0.4
NEDD4L-226ENST00000589167 PIAS4Q8N2W9 510 aaPredicted RBP17.47■□□□□ 0.39
NEDD4L-226ENST00000589167 NISCHQ9Y2I1 1504 aa17.41■□□□□ 0.38
NEDD4L-226ENST00000589167 MSH5O43196 834 aa17.39■□□□□ 0.37
NEDD4L-226ENST00000589167 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.16
NEDD4L-226ENST00000589167 SCAF1Q9H7N4 1312 aaKnown RBP15.98■□□□□ 0.15
NEDD4L-226ENST00000589167 DMRT2Q9Y5R5 561 aa15.89■□□□□ 0.13
NEDD4L-226ENST00000589167 PPP4R3CPQ6ZMV5 832 aa15.78■□□□□ 0.12
NEDD4L-226ENST00000589167 CCDC180Q9P1Z9 1646 aa15.61■□□□□ 0.09
NEDD4L-226ENST00000589167 ABCC9O60706 1549 aa15.6■□□□□ 0.09
NEDD4L-226ENST00000589167 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
NEDD4L-226ENST00000589167 HOXD11P31277 338 aaPredicted RBP15.34■□□□□ 0.05
NEDD4L-226ENST00000589167 DCAF8L1A6NGE4 600 aa15.3■□□□□ 0.04
NEDD4L-226ENST00000589167 CACNB1Q02641 598 aaPredicted RBP15.29■□□□□ 0.04
NEDD4L-226ENST00000589167 RNF216Q9NWF9 866 aaPredicted RBP15.26■□□□□ 0.03
NEDD4L-226ENST00000589167 NCBP3Q53F19 620 aaKnown RBP15.18■□□□□ 0.02
NEDD4L-226ENST00000589167 NPM3O75607 178 aaKnown RBP14.98□□□□□ -0.01
NEDD4L-226ENST00000589167 RNF39Q9H2S5 420 aa14.87□□□□□ -0.03
NEDD4L-226ENST00000589167 RB1CC1Q8TDY2 1594 aa14.83□□□□□ -0.04
NEDD4L-226ENST00000589167 KCNA4P22459 653 aa14.81□□□□□ -0.04
NEDD4L-226ENST00000589167 DNAJC5BQ9UF47 199 aa14.74□□□□□ -0.05
NEDD4L-226ENST00000589167 NACADO15069 1562 aa14.73□□□□□ -0.05
NEDD4L-226ENST00000589167 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.061e-8■■□□□ 12.1
NEDD4L-226ENST00000589167 C1QBPQ07021 282 aaKnown RBP14.65□□□□□ -0.06
NEDD4L-226ENST00000589167 DCAF8L2P0C7V8 631 aa14.64□□□□□ -0.07
NEDD4L-226ENST00000589167 MYO15BQ96JP2 1530 aa14.52□□□□□ -0.08
NEDD4L-226ENST00000589167 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
NEDD4L-226ENST00000589167 UNC13AQ9UPW8 1703 aa14.49□□□□□ -0.09
NEDD4L-226ENST00000589167 ZCCHC6Q5VYS8 1495 aaKnown RBP14.48□□□□□ -0.09
NEDD4L-226ENST00000589167 BICRAQ9NZM4 1560 aa14.41□□□□□ -0.1
NEDD4L-226ENST00000589167 DCAF1Q9Y4B6 1507 aa14.36□□□□□ -0.11
NEDD4L-226ENST00000589167 U3KPZ7 1027 aaPredicted RBP14.34□□□□□ -0.11
NEDD4L-226ENST00000589167 SLC4A2P04920 1241 aa14.29□□□□□ -0.12
NEDD4L-226ENST00000589167 SCRIBQ14160 1630 aa14.29□□□□□ -0.12
NEDD4L-226ENST00000589167 SHROOM4Q9ULL8 1493 aa14.21□□□□□ -0.13
NEDD4L-226ENST00000589167 SPINK5Q9NQ38 1064 aaPredicted RBP14.13□□□□□ -0.15
NEDD4L-226ENST00000589167 CAPN15O75808 1086 aa14.1□□□□□ -0.15
NEDD4L-226ENST00000589167 CC2D2AQ9P2K1 1620 aa14.07□□□□□ -0.16
NEDD4L-226ENST00000589167 EIF4G1Q04637 1599 aaKnown RBP14.06□□□□□ -0.16
NEDD4L-226ENST00000589167 POTEHQ6S545 545 aa14.03□□□□□ -0.16
NEDD4L-226ENST00000589167 CECR2Q9BXF3 1484 aa14.03□□□□□ -0.16
NEDD4L-226ENST00000589167 SLC4A1APQ9BWU0 796 aaKnown RBP13.99□□□□□ -0.17
NEDD4L-226ENST00000589167 DSG3P32926 999 aa13.97□□□□□ -0.17
NEDD4L-226ENST00000589167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.94□□□□□ -0.18
NEDD4L-226ENST00000589167 HNRNPUL2Q1KMD3 747 aaKnown RBP13.94□□□□□ -0.18
NEDD4L-226ENST00000589167 TRHP20396 242 aaPredicted RBP13.92□□□□□ -0.18
NEDD4L-226ENST00000589167 APLP2Q06481 763 aa13.91□□□□□ -0.18
NEDD4L-226ENST00000589167 SAMD1Q6SPF0 538 aaPredicted RBP13.88□□□□□ -0.19
NEDD4L-226ENST00000589167 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.2
NEDD4L-226ENST00000589167 ZNF219Q9P2Y4 722 aaPredicted RBP13.83□□□□□ -0.2
NEDD4L-226ENST00000589167 ABCB7O75027 752 aa13.8□□□□□ -0.2
NEDD4L-226ENST00000589167 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
NEDD4L-226ENST00000589167 ZBTB22O15209 634 aa13.61□□□□□ -0.23
NEDD4L-226ENST00000589167 SMARCA4P51532 1647 aa13.6□□□□□ -0.23
NEDD4L-226ENST00000589167 NCAPD3P42695 1498 aa13.58□□□□□ -0.24
NEDD4L-226ENST00000589167 ATAD2BQ9ULI0 1458 aa13.58□□□□□ -0.24
NEDD4L-226ENST00000589167 POLA2Q14181 598 aa13.56□□□□□ -0.24
NEDD4L-226ENST00000589167 ATF5Q9Y2D1 282 aaPredicted RBP13.56□□□□□ -0.24
NEDD4L-226ENST00000589167 SMARCA2P51531 1590 aa13.54□□□□□ -0.24
NEDD4L-226ENST00000589167 HMGXB3Q12766 1538 aa13.54□□□□□ -0.24
NEDD4L-226ENST00000589167 BAZ1AQ9NRL2 1556 aaPredicted RBP13.52□□□□□ -0.25
NEDD4L-226ENST00000589167 BAZ1BQ9UIG0 1483 aaKnown RBP13.48□□□□□ -0.25
NEDD4L-226ENST00000589167 ERCC6Q03468 1493 aa13.47□□□□□ -0.25
NEDD4L-226ENST00000589167 MROH2BQ7Z745 1585 aa13.44□□□□□ -0.26
NEDD4L-226ENST00000589167 PEG3Q9GZU2 1588 aa13.44□□□□□ -0.26
NEDD4L-226ENST00000589167 NESP48681 1621 aa13.41□□□□□ -0.26
NEDD4L-226ENST00000589167 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
NEDD4L-226ENST00000589167 CUX2O14529 1486 aa13.39□□□□□ -0.27
NEDD4L-226ENST00000589167 LAMC3Q9Y6N6 1575 aa13.29□□□□□ -0.28
NEDD4L-226ENST00000589167 ATXN8OSP0DMR3 200 aa13.29□□□□□ -0.28
NEDD4L-226ENST00000589167 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
NEDD4L-226ENST00000589167 THOC2Q8NI27 1593 aaKnown RBP13.28□□□□□ -0.28
NEDD4L-226ENST00000589167 DNAJC5Q9H3Z4 198 aa13.27□□□□□ -0.29
NEDD4L-226ENST00000589167 WIZO95785 1651 aa13.27□□□□□ -0.29
NEDD4L-226ENST00000589167 ZBTB12Q9Y330 459 aaPredicted RBP13.23□□□□□ -0.29
NEDD4L-226ENST00000589167 KIF21AQ7Z4S6 1674 aa13.23□□□□□ -0.29
NEDD4L-226ENST00000589167 PDS5BQ9NTI5 1447 aa13.2□□□□□ -0.3
NEDD4L-226ENST00000589167 CADPSQ9ULU8 1353 aa13.18□□□□□ -0.3
NEDD4L-226ENST00000589167 RSF1Q96T23 1441 aaPredicted RBP13.16□□□□□ -0.3
NEDD4L-226ENST00000589167 CSRNP3Q8WYN3 585 aa13.16□□□□□ -0.3
NEDD4L-226ENST00000589167 TOP2AP11388 1531 aaKnown RBP13.13□□□□□ -0.31
NEDD4L-226ENST00000589167 MRC2Q9UBG0 1479 aa13.12□□□□□ -0.31
NEDD4L-226ENST00000589167 OSCARQ8IYS5 282 aa13.11□□□□□ -0.31
NEDD4L-226ENST00000589167 WDR62O43379 1518 aa13.09□□□□□ -0.31
NEDD4L-226ENST00000589167 CEP164Q9UPV0 1460 aa13.09□□□□□ -0.31
NEDD4L-226ENST00000589167 FANCD2Q9BXW9 1451 aa13.07□□□□□ -0.32
NEDD4L-226ENST00000589167 CFTRP13569 1480 aa13.05□□□□□ -0.32
NEDD4L-226ENST00000589167 AKT1S1Q96B36 256 aa13.03□□□□□ -0.32
NEDD4L-226ENST00000589167 CHRDL2Q6WN34 429 aa12.99□□□□□ -0.33
NEDD4L-226ENST00000589167 FBLN2P98095 1184 aa12.98□□□□□ -0.33
NEDD4L-226ENST00000589167 URB2Q14146 1524 aaKnown RBP12.97□□□□□ -0.33
NEDD4L-226ENST00000589167 CCDC88BA6NC98 1476 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms