RNA–Protein interactions for RNA: ENST00000589149.5

TNPO2-213, Transcript of transportin 2, humanhuman

TSL 5

Gene TNPO2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-213ENST00000589149 NISCHQ9Y2I1 1504 aa34.96■■■■□ 3.19
TNPO2-213ENST00000589149 CCDC180Q9P1Z9 1646 aa30.95■■■□□ 2.54
TNPO2-213ENST00000589149 ABCC9O60706 1549 aa29.71■■■□□ 2.35
TNPO2-213ENST00000589149 ZCCHC6Q5VYS8 1495 aaKnown RBP29.2■■■□□ 2.26
TNPO2-213ENST00000589149 MYO15BQ96JP2 1530 aa29.04■■■□□ 2.24
TNPO2-213ENST00000589149 DCAF1Q9Y4B6 1507 aa29.04■■■□□ 2.24
TNPO2-213ENST00000589149 NACADO15069 1562 aa29■■■□□ 2.23
TNPO2-213ENST00000589149 DCAF8L2P0C7V8 631 aa28.9■■■□□ 2.22
TNPO2-213ENST00000589149 RB1CC1Q8TDY2 1594 aa28.89■■■□□ 2.22
TNPO2-213ENST00000589149 UNC13AQ9UPW8 1703 aa28.2■■■□□ 2.1
TNPO2-213ENST00000589149 SCRIBQ14160 1630 aa28.13■■■□□ 2.09
TNPO2-213ENST00000589149 BICRAQ9NZM4 1560 aa27.95■■■□□ 2.07
TNPO2-213ENST00000589149 SHROOM4Q9ULL8 1493 aa27.84■■■□□ 2.05
TNPO2-213ENST00000589149 PABPN1Q86U42 306 aaKnown RBP eCLIP27.81■■■□□ 2.047e-7■□□□□ 10.4
TNPO2-213ENST00000589149 DNAJC5BQ9UF47 199 aa27.76■■■□□ 2.03
TNPO2-213ENST00000589149 EIF4G1Q04637 1599 aaKnown RBP27.19■■□□□ 1.94
TNPO2-213ENST00000589149 CECR2Q9BXF3 1484 aa27.11■■□□□ 1.93
TNPO2-213ENST00000589149 BAZ1AQ9NRL2 1556 aaPredicted RBP27.09■■□□□ 1.93
TNPO2-213ENST00000589149 SMARCA4P51532 1647 aa27.01■■□□□ 1.92
TNPO2-213ENST00000589149 CC2D2AQ9P2K1 1620 aa26.96■■□□□ 1.91
TNPO2-213ENST00000589149 MROH2BQ7Z745 1585 aa26.89■■□□□ 1.9
TNPO2-213ENST00000589149 PEG3Q9GZU2 1588 aa26.82■■□□□ 1.88
TNPO2-213ENST00000589149 SMARCA2P51531 1590 aa26.8■■□□□ 1.88
TNPO2-213ENST00000589149 ATAD2BQ9ULI0 1458 aa26.77■■□□□ 1.88
TNPO2-213ENST00000589149 RSF1Q96T23 1441 aaPredicted RBP26.77■■□□□ 1.88
TNPO2-213ENST00000589149 NCAPD3P42695 1498 aa26.74■■□□□ 1.87
TNPO2-213ENST00000589149 HMGXB3Q12766 1538 aa26.64■■□□□ 1.85
TNPO2-213ENST00000589149 WIZO95785 1651 aa26.62■■□□□ 1.85
TNPO2-213ENST00000589149 BAZ1BQ9UIG0 1483 aaKnown RBP26.56■■□□□ 1.84
TNPO2-213ENST00000589149 TOP2AP11388 1531 aaKnown RBP26.41■■□□□ 1.82
TNPO2-213ENST00000589149 SUPT5HO00267 1087 aaKnown RBP26.3■■□□□ 1.8
TNPO2-213ENST00000589149 CCDC88BA6NC98 1476 aa26.08■■□□□ 1.77
TNPO2-213ENST00000589149 LAMC3Q9Y6N6 1575 aa25.97■■□□□ 1.75
TNPO2-213ENST00000589149 CADPSQ9ULU8 1353 aa25.96■■□□□ 1.75
TNPO2-213ENST00000589149 CFTRP13569 1480 aa25.9■■□□□ 1.74
TNPO2-213ENST00000589149 NESP48681 1621 aa25.83■■□□□ 1.73
TNPO2-213ENST00000589149 PDS5BQ9NTI5 1447 aa25.77■■□□□ 1.72
TNPO2-213ENST00000589149 DNAJC5Q9H3Z4 198 aa25.76■■□□□ 1.71
TNPO2-213ENST00000589149 PRDM2Q13029 1718 aa25.76■■□□□ 1.71
TNPO2-213ENST00000589149 FANCD2Q9BXW9 1451 aa25.62■■□□□ 1.69
TNPO2-213ENST00000589149 ERCC6Q03468 1493 aa25.61■■□□□ 1.69
TNPO2-213ENST00000589149 KIF21AQ7Z4S6 1674 aa25.58■■□□□ 1.68
TNPO2-213ENST00000589149 CEP164Q9UPV0 1460 aa25.56■■□□□ 1.68
TNPO2-213ENST00000589149 MRC2Q9UBG0 1479 aa25.44■■□□□ 1.66
TNPO2-213ENST00000589149 THOC2Q8NI27 1593 aaKnown RBP25.41■■□□□ 1.66
TNPO2-213ENST00000589149 CUX2O14529 1486 aa25.4■■□□□ 1.66
TNPO2-213ENST00000589149 ABCC8Q09428 1581 aa25.39■■□□□ 1.66
TNPO2-213ENST00000589149 WDR62O43379 1518 aa25.36■■□□□ 1.65
TNPO2-213ENST00000589149 URB2Q14146 1524 aaKnown RBP25.32■■□□□ 1.64
TNPO2-213ENST00000589149 DNMBPQ6XZF7 1577 aa25.3■■□□□ 1.64
TNPO2-213ENST00000589149 TOPBP1Q92547 1522 aa25.26■■□□□ 1.63
TNPO2-213ENST00000589149 WRNQ14191 1432 aaPredicted RBP eCLIP25.23■■□□□ 1.63
TNPO2-213ENST00000589149 CUX1P39880 1505 aa25.21■■□□□ 1.63
TNPO2-213ENST00000589149 TOP2BQ02880 1626 aa25.15■■□□□ 1.62
TNPO2-213ENST00000589149 BIVM-ERCC5R4GMW8 1640 aa25.15■■□□□ 1.62
TNPO2-213ENST00000589149 SYNJ1O43426 1573 aa25.11■■□□□ 1.61
TNPO2-213ENST00000589149 POLA1P09884 1462 aaPredicted RBP25.07■■□□□ 1.6
TNPO2-213ENST00000589149 FGD5Q6ZNL6 1462 aa25.06■■□□□ 1.6
TNPO2-213ENST00000589149 IFT140Q96RY7 1462 aa25.03■■□□□ 1.6
TNPO2-213ENST00000589149 SOGA1O94964 1423 aa24.99■■□□□ 1.59
TNPO2-213ENST00000589149 TARBP1Q13395 1621 aaKnown RBP24.97■■□□□ 1.59
TNPO2-213ENST00000589149 TRIM41Q8WV44 630 aa24.91■■□□□ 1.58
TNPO2-213ENST00000589149 WDR97A6NE52 1622 aa24.9■■□□□ 1.58
TNPO2-213ENST00000589149 RAD54L2Q9Y4B4 1467 aa24.9■■□□□ 1.58
TNPO2-213ENST00000589149 ABCA10Q8WWZ4 1543 aa24.9■■□□□ 1.58
TNPO2-213ENST00000589149 CHIC1Q5VXU3 224 aa24.87■■□□□ 1.57
TNPO2-213ENST00000589149 ZNF608Q9ULD9 1512 aaPredicted RBP24.8■■□□□ 1.56
TNPO2-213ENST00000589149 EIF4G3O43432 1585 aaKnown RBP24.75■■□□□ 1.55
TNPO2-213ENST00000589149 TDRD9Q8NDG6 1382 aaKnown RBP24.74■■□□□ 1.55
TNPO2-213ENST00000589149 ABCA5Q8WWZ7 1642 aa24.73■■□□□ 1.55
TNPO2-213ENST00000589149 AQRO60306 1485 aaKnown RBP eCLIP24.72■■□□□ 1.555e-7■■■■□ 23.2
TNPO2-213ENST00000589149 GAPVD1Q14C86 1478 aa24.71■■□□□ 1.55
TNPO2-213ENST00000589149 KIF27Q86VH2 1401 aa24.7■■□□□ 1.55
TNPO2-213ENST00000589149 GRIN2BQ13224 1484 aa24.66■■□□□ 1.54
TNPO2-213ENST00000589149 PBRM1Q86U86 1689 aa24.62■■□□□ 1.53
TNPO2-213ENST00000589149 ERICH3Q5RHP9 1530 aa24.62■■□□□ 1.53
TNPO2-213ENST00000589149 MAGI1Q96QZ7 1491 aaPredicted RBP24.58■■□□□ 1.52
TNPO2-213ENST00000589149 EEA1Q15075 1411 aa24.57■■□□□ 1.52
TNPO2-213ENST00000589149 IGF1RP08069 1367 aa24.53■■□□□ 1.52
TNPO2-213ENST00000589149 SNAPC4Q5SXM2 1469 aa24.51■■□□□ 1.51
TNPO2-213ENST00000589149 RUSC2Q8N2Y8 1516 aa24.51■■□□□ 1.51
TNPO2-213ENST00000589149 CUL7Q14999 1698 aa24.48■■□□□ 1.51
TNPO2-213ENST00000589149 FHAD1B1AJZ9 1412 aa24.46■■□□□ 1.51
TNPO2-213ENST00000589149 SYNJ2O15056 1496 aa24.45■■□□□ 1.51
TNPO2-213ENST00000589149 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
TNPO2-213ENST00000589149 CSRNP3Q8WYN3 585 aa24.41■■□□□ 1.5
TNPO2-213ENST00000589149 CARMIL1Q5VZK9 1371 aa24.39■■□□□ 1.49
TNPO2-213ENST00000589149 CHMP7Q8WUX9 453 aaPredicted RBP24.38■■□□□ 1.49
TNPO2-213ENST00000589149 CHD1O14646 1710 aa24.35■■□□□ 1.49
TNPO2-213ENST00000589149 GRIN2AQ12879 1464 aa24.33■■□□□ 1.49
TNPO2-213ENST00000589149 PRXQ9BXM0 1461 aa24.33■■□□□ 1.49
TNPO2-213ENST00000589149 FBLN2P98095 1184 aa24.31■■□□□ 1.48
TNPO2-213ENST00000589149 RAPGEF2Q9Y4G8 1499 aa24.31■■□□□ 1.48
TNPO2-213ENST00000589149 OSCARQ8IYS5 282 aa24.29■■□□□ 1.48
TNPO2-213ENST00000589149 FAM9AQ8IZU1 332 aaPredicted RBP24.26■■□□□ 1.47
TNPO2-213ENST00000589149 NUP160Q12769 1436 aa24.23■■□□□ 1.47
TNPO2-213ENST00000589149 KIF21BO75037 1637 aa24.23■■□□□ 1.47
TNPO2-213ENST00000589149 CEP170Q5SW79 1584 aa24.16■■□□□ 1.46
TNPO2-213ENST00000589149 CLASP1Q7Z460 1538 aa24.14■■□□□ 1.45
TNPO2-213ENST00000589149 KIAA0586Q9BVV6 1533 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms