RNA–Protein interactions for RNA: ENST00000589006.1

SAFB-206, Transcript of scaffold attachment factor B, humanhuman

TSL 5

Gene SAFB, Length 459 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-206ENST00000589006 NISCHQ9Y2I1 1504 aa47.42■■■■■ 5.18
SAFB-206ENST00000589006 ABCC9O60706 1549 aa42.45■■■■■ 4.39
SAFB-206ENST00000589006 CCDC180Q9P1Z9 1646 aa42.02■■■■■ 4.32
SAFB-206ENST00000589006 DNAJC5BQ9UF47 199 aa40.48■■■■■ 4.07
SAFB-206ENST00000589006 RB1CC1Q8TDY2 1594 aa40.04■■■■■ 4
SAFB-206ENST00000589006 ZCCHC6Q5VYS8 1495 aaKnown RBP39.58■■■■□ 3.93
SAFB-206ENST00000589006 NACADO15069 1562 aa39.55■■■■□ 3.92
SAFB-206ENST00000589006 PABPN1Q86U42 306 aaKnown RBP eCLIP39.37■■■■□ 3.892e-11■□□□□ 8.5
SAFB-206ENST00000589006 DCAF8L2P0C7V8 631 aa39.35■■■■□ 3.89
SAFB-206ENST00000589006 MYO15BQ96JP2 1530 aa39.33■■■■□ 3.89
SAFB-206ENST00000589006 DCAF1Q9Y4B6 1507 aa39.3■■■■□ 3.88
SAFB-206ENST00000589006 UNC13AQ9UPW8 1703 aa39.26■■■■□ 3.88
SAFB-206ENST00000589006 BICRAQ9NZM4 1560 aa38.95■■■■□ 3.83
SAFB-206ENST00000589006 CC2D2AQ9P2K1 1620 aa38.32■■■■□ 3.73
SAFB-206ENST00000589006 SCRIBQ14160 1630 aa38.3■■■■□ 3.72
SAFB-206ENST00000589006 CECR2Q9BXF3 1484 aa38.29■■■■□ 3.72
SAFB-206ENST00000589006 SHROOM4Q9ULL8 1493 aa38.24■■■■□ 3.71
SAFB-206ENST00000589006 EIF4G1Q04637 1599 aaKnown RBP38.03■■■■□ 3.68
SAFB-206ENST00000589006 DNAJC5Q9H3Z4 198 aa37.66■■■■□ 3.62
SAFB-206ENST00000589006 CUX2O14529 1486 aa36.84■■■■□ 3.49
SAFB-206ENST00000589006 BAZ1AQ9NRL2 1556 aaPredicted RBP36.72■■■■□ 3.47
SAFB-206ENST00000589006 SMARCA4P51532 1647 aa36.71■■■■□ 3.47
SAFB-206ENST00000589006 ERCC6Q03468 1493 aa36.68■■■■□ 3.46
SAFB-206ENST00000589006 MROH2BQ7Z745 1585 aa36.54■■■■□ 3.44
SAFB-206ENST00000589006 NCAPD3P42695 1498 aa36.5■■■■□ 3.43
SAFB-206ENST00000589006 ATAD2BQ9ULI0 1458 aa36.42■■■■□ 3.42
SAFB-206ENST00000589006 SMARCA2P51531 1590 aa36.39■■■■□ 3.42
SAFB-206ENST00000589006 PEG3Q9GZU2 1588 aa36.39■■■■□ 3.42
SAFB-206ENST00000589006 NESP48681 1621 aa36.27■■■■□ 3.4
SAFB-206ENST00000589006 RSF1Q96T23 1441 aaPredicted RBP36.26■■■■□ 3.4
SAFB-206ENST00000589006 HMGXB3Q12766 1538 aa36.21■■■■□ 3.39
SAFB-206ENST00000589006 WIZO95785 1651 aa36.18■■■■□ 3.38
SAFB-206ENST00000589006 BAZ1BQ9UIG0 1483 aaKnown RBP36.11■■■■□ 3.37
SAFB-206ENST00000589006 THOC2Q8NI27 1593 aaKnown RBP36.07■■■■□ 3.37
SAFB-206ENST00000589006 LAMC3Q9Y6N6 1575 aa35.84■■■■□ 3.33
SAFB-206ENST00000589006 KIF21AQ7Z4S6 1674 aa35.83■■■■□ 3.33
SAFB-206ENST00000589006 TOP2AP11388 1531 aaKnown RBP35.81■■■■□ 3.32
SAFB-206ENST00000589006 TRIM41Q8WV44 630 aa35.76■■■■□ 3.32
SAFB-206ENST00000589006 PDS5BQ9NTI5 1447 aa35.61■■■■□ 3.29
SAFB-206ENST00000589006 SUPT5HO00267 1087 aaKnown RBP35.53■■■■□ 3.28
SAFB-206ENST00000589006 MRC2Q9UBG0 1479 aa35.41■■■■□ 3.26
SAFB-206ENST00000589006 CCDC88BA6NC98 1476 aa35.38■■■■□ 3.25
SAFB-206ENST00000589006 WDR62O43379 1518 aa35.36■■■■□ 3.25
SAFB-206ENST00000589006 CADPSQ9ULU8 1353 aa35.35■■■■□ 3.25
SAFB-206ENST00000589006 CFTRP13569 1480 aa35.18■■■■□ 3.22
SAFB-206ENST00000589006 CEP164Q9UPV0 1460 aa35.11■■■■□ 3.21
SAFB-206ENST00000589006 FANCD2Q9BXW9 1451 aa35■■■■□ 3.19
SAFB-206ENST00000589006 PRDM2Q13029 1718 aa35■■■■□ 3.19
SAFB-206ENST00000589006 OSCARQ8IYS5 282 aa34.98■■■■□ 3.19
SAFB-206ENST00000589006 URB2Q14146 1524 aaKnown RBP34.8■■■■□ 3.16
SAFB-206ENST00000589006 RIMBP3CA6NJZ7 1639 aa34.75■■■■□ 3.15
SAFB-206ENST00000589006 RIMBP3BA6NNM3 1639 aa34.75■■■■□ 3.15
SAFB-206ENST00000589006 RIMBP3Q9UFD9 1639 aa34.75■■■■□ 3.15
SAFB-206ENST00000589006 ARHGEF11O15085 1522 aa34.52■■■■□ 3.12
SAFB-206ENST00000589006 ZNF608Q9ULD9 1512 aaPredicted RBP34.5■■■■□ 3.11
SAFB-206ENST00000589006 IFT140Q96RY7 1462 aa34.41■■■■□ 3.1
SAFB-206ENST00000589006 ABCC8Q09428 1581 aa34.4■■■■□ 3.1
SAFB-206ENST00000589006 DNMBPQ6XZF7 1577 aa34.37■■■■□ 3.09
SAFB-206ENST00000589006 TOPBP1Q92547 1522 aa34.37■■■■□ 3.09
SAFB-206ENST00000589006 EIF4G3O43432 1585 aaKnown RBP34.29■■■■□ 3.08
SAFB-206ENST00000589006 CUX1P39880 1505 aa34.26■■■■□ 3.08
SAFB-206ENST00000589006 CYB5RLQ6IPT4 315 aa34.26■■■■□ 3.08
SAFB-206ENST00000589006 CHD1O14646 1710 aa34.22■■■■□ 3.07
SAFB-206ENST00000589006 WRNQ14191 1432 aaPredicted RBP eCLIP34.15■■■■□ 3.06
SAFB-206ENST00000589006 ARAP1Q96P48 1450 aa34.14■■■■□ 3.06
SAFB-206ENST00000589006 TRHP20396 242 aaPredicted RBP34.13■■■■□ 3.05
SAFB-206ENST00000589006 POLA1P09884 1462 aaPredicted RBP34.1■■■■□ 3.05
SAFB-206ENST00000589006 BIVM-ERCC5R4GMW8 1640 aa34.09■■■■□ 3.05
SAFB-206ENST00000589006 TOP2BQ02880 1626 aa34.08■■■■□ 3.05
SAFB-206ENST00000589006 SYNJ1O43426 1573 aa34.07■■■■□ 3.05
SAFB-206ENST00000589006 FGD5Q6ZNL6 1462 aa34.07■■■■□ 3.04
SAFB-206ENST00000589006 AQRO60306 1485 aaKnown RBP eCLIP34.06■■■■□ 3.041e-6■■■■■ 29.1
SAFB-206ENST00000589006 TARBP1Q13395 1621 aaKnown RBP34.05■■■■□ 3.04
SAFB-206ENST00000589006 FBLN2P98095 1184 aa33.96■■■■□ 3.03
SAFB-206ENST00000589006 SOGA1O94964 1423 aa33.96■■■■□ 3.03
SAFB-206ENST00000589006 RAD54L2Q9Y4B4 1467 aa33.94■■■■□ 3.02
SAFB-206ENST00000589006 WDR97A6NE52 1622 aa33.82■■■■□ 3.01
SAFB-206ENST00000589006 ABCA10Q8WWZ4 1543 aa33.78■■■■□ 3
SAFB-206ENST00000589006 CLASP1Q7Z460 1538 aa33.74■■■□□ 2.99
SAFB-206ENST00000589006 TDRD9Q8NDG6 1382 aaKnown RBP33.72■■■□□ 2.99
SAFB-206ENST00000589006 SNAPC4Q5SXM2 1469 aa33.71■■■□□ 2.99
SAFB-206ENST00000589006 AEBP2Q6ZN18 517 aaPredicted RBP33.68■■■□□ 2.98
SAFB-206ENST00000589006 ABCA5Q8WWZ7 1642 aa33.62■■■□□ 2.97
SAFB-206ENST00000589006 GAPVD1Q14C86 1478 aa33.57■■■□□ 2.97
SAFB-206ENST00000589006 CHMP7Q8WUX9 453 aaPredicted RBP33.55■■■□□ 2.96
SAFB-206ENST00000589006 MAGI1Q96QZ7 1491 aaPredicted RBP33.54■■■□□ 2.96
SAFB-206ENST00000589006 GRIN2BQ13224 1484 aa33.52■■■□□ 2.96
SAFB-206ENST00000589006 PBRM1Q86U86 1689 aa33.52■■■□□ 2.96
SAFB-206ENST00000589006 SYNJ2O15056 1496 aa33.45■■■□□ 2.95
SAFB-206ENST00000589006 CHIC1Q5VXU3 224 aa33.45■■■□□ 2.95
SAFB-206ENST00000589006 KIF27Q86VH2 1401 aa33.41■■■□□ 2.94
SAFB-206ENST00000589006 ERICH3Q5RHP9 1530 aa33.38■■■□□ 2.93
SAFB-206ENST00000589006 IGF1RP08069 1367 aa33.26■■■□□ 2.92
SAFB-206ENST00000589006 ADAMTS12P58397 1594 aa33.26■■■□□ 2.91
SAFB-206ENST00000589006 RUSC2Q8N2Y8 1516 aa33.24■■■□□ 2.91
SAFB-206ENST00000589006 ERCC6L2Q5T890 1561 aa33.21■■■□□ 2.91
SAFB-206ENST00000589006 FHAD1B1AJZ9 1412 aa33.2■■■□□ 2.91
SAFB-206ENST00000589006 CUL7Q14999 1698 aa33.16■■■□□ 2.9
SAFB-206ENST00000589006 GRIN2AQ12879 1464 aa33.09■■■□□ 2.89
SAFB-206ENST00000589006 CARMIL1Q5VZK9 1371 aa33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms