RNA–Protein interactions for RNA: ENST00000589000.5

PQLC1-209, Transcript of PQ loop repeat containing 1, humanhuman

TSL 4

Gene PQLC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PQLC1-209ENST00000589000 NISCHQ9Y2I1 1504 aa28.7■■■□□ 2.19
PQLC1-209ENST00000589000 CCDC180Q9P1Z9 1646 aa25.8■■□□□ 1.72
PQLC1-209ENST00000589000 ABCC9O60706 1549 aa25.63■■□□□ 1.69
PQLC1-209ENST00000589000 RB1CC1Q8TDY2 1594 aa24.5■■□□□ 1.51
PQLC1-209ENST00000589000 NACADO15069 1562 aa24.37■■□□□ 1.49
PQLC1-209ENST00000589000 DCAF8L2P0C7V8 631 aa24.11■■□□□ 1.45
PQLC1-209ENST00000589000 MYO15BQ96JP2 1530 aa24.09■■□□□ 1.45
PQLC1-209ENST00000589000 DNAJC5BQ9UF47 199 aa23.98■■□□□ 1.43
PQLC1-209ENST00000589000 UNC13AQ9UPW8 1703 aa23.95■■□□□ 1.42
PQLC1-209ENST00000589000 PABPN1Q86U42 306 aaKnown RBP eCLIP23.84■■□□□ 1.41
PQLC1-209ENST00000589000 ZCCHC6Q5VYS8 1495 aaKnown RBP23.81■■□□□ 1.4
PQLC1-209ENST00000589000 DCAF1Q9Y4B6 1507 aa23.77■■□□□ 1.4
PQLC1-209ENST00000589000 BICRAQ9NZM4 1560 aa23.76■■□□□ 1.39
PQLC1-209ENST00000589000 SHROOM4Q9ULL8 1493 aa23.53■■□□□ 1.36
PQLC1-209ENST00000589000 SCRIBQ14160 1630 aa23.41■■□□□ 1.34
PQLC1-209ENST00000589000 CC2D2AQ9P2K1 1620 aa23.21■■□□□ 1.31
PQLC1-209ENST00000589000 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
PQLC1-209ENST00000589000 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
PQLC1-209ENST00000589000 NCAPD3P42695 1498 aa22.47■■□□□ 1.19
PQLC1-209ENST00000589000 ATAD2BQ9ULI0 1458 aa22.39■■□□□ 1.17
PQLC1-209ENST00000589000 SMARCA4P51532 1647 aa22.39■■□□□ 1.17
PQLC1-209ENST00000589000 SMARCA2P51531 1590 aa22.36■■□□□ 1.17
PQLC1-209ENST00000589000 HMGXB3Q12766 1538 aa22.32■■□□□ 1.16
PQLC1-209ENST00000589000 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
PQLC1-209ENST00000589000 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
PQLC1-209ENST00000589000 BAZ1BQ9UIG0 1483 aaKnown RBP22.16■■□□□ 1.14
PQLC1-209ENST00000589000 CUX2O14529 1486 aa22.15■■□□□ 1.14
PQLC1-209ENST00000589000 ERCC6Q03468 1493 aa22.15■■□□□ 1.14
PQLC1-209ENST00000589000 MROH2BQ7Z745 1585 aa22.08■■□□□ 1.13
PQLC1-209ENST00000589000 DNAJC5Q9H3Z4 198 aa22.05■■□□□ 1.12
PQLC1-209ENST00000589000 NESP48681 1621 aa22.02■■□□□ 1.12
PQLC1-209ENST00000589000 LAMC3Q9Y6N6 1575 aa21.97■■□□□ 1.11
PQLC1-209ENST00000589000 THOC2Q8NI27 1593 aaKnown RBP21.86■■□□□ 1.09
PQLC1-209ENST00000589000 WIZO95785 1651 aa21.83■■□□□ 1.09
PQLC1-209ENST00000589000 PDS5BQ9NTI5 1447 aa21.82■■□□□ 1.08
PQLC1-209ENST00000589000 KIF21AQ7Z4S6 1674 aa21.79■■□□□ 1.08
PQLC1-209ENST00000589000 CADPSQ9ULU8 1353 aa21.77■■□□□ 1.08
PQLC1-209ENST00000589000 RSF1Q96T23 1441 aaPredicted RBP21.65■■□□□ 1.06
PQLC1-209ENST00000589000 MRC2Q9UBG0 1479 aa21.62■■□□□ 1.05
PQLC1-209ENST00000589000 WDR62O43379 1518 aa21.58■■□□□ 1.04
PQLC1-209ENST00000589000 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.04
PQLC1-209ENST00000589000 CFTRP13569 1480 aa21.54■■□□□ 1.04
PQLC1-209ENST00000589000 CEP164Q9UPV0 1460 aa21.54■■□□□ 1.04
PQLC1-209ENST00000589000 FANCD2Q9BXW9 1451 aa21.51■■□□□ 1.03
PQLC1-209ENST00000589000 PRDM2Q13029 1718 aa21.39■■□□□ 1.01
PQLC1-209ENST00000589000 URB2Q14146 1524 aaKnown RBP21.32■■□□□ 1
PQLC1-209ENST00000589000 CCDC88BA6NC98 1476 aa21.31■■□□□ 1
PQLC1-209ENST00000589000 ABCC8Q09428 1581 aa21.14■□□□□ 0.97
PQLC1-209ENST00000589000 OSCARQ8IYS5 282 aa21.12■□□□□ 0.97
PQLC1-209ENST00000589000 TOPBP1Q92547 1522 aa21.12■□□□□ 0.97
PQLC1-209ENST00000589000 IFT140Q96RY7 1462 aa21.12■□□□□ 0.97
PQLC1-209ENST00000589000 DNMBPQ6XZF7 1577 aa21.06■□□□□ 0.96
PQLC1-209ENST00000589000 ZNF608Q9ULD9 1512 aaPredicted RBP21.03■□□□□ 0.96
PQLC1-209ENST00000589000 TRIM41Q8WV44 630 aa21.02■□□□□ 0.96
PQLC1-209ENST00000589000 EIF4G3O43432 1585 aaKnown RBP20.95■□□□□ 0.94
PQLC1-209ENST00000589000 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
PQLC1-209ENST00000589000 POLA1P09884 1462 aaPredicted RBP20.89■□□□□ 0.94
PQLC1-209ENST00000589000 AQRO60306 1485 aaKnown RBP eCLIP20.84■□□□□ 0.93
PQLC1-209ENST00000589000 RIMBP3CA6NJZ7 1639 aa20.83■□□□□ 0.93
PQLC1-209ENST00000589000 RIMBP3BA6NNM3 1639 aa20.83■□□□□ 0.93
PQLC1-209ENST00000589000 RIMBP3Q9UFD9 1639 aa20.83■□□□□ 0.93
PQLC1-209ENST00000589000 SOGA1O94964 1423 aa20.8■□□□□ 0.92
PQLC1-209ENST00000589000 WDR97A6NE52 1622 aa20.8■□□□□ 0.92
PQLC1-209ENST00000589000 CHD1O14646 1710 aa20.79■□□□□ 0.92
PQLC1-209ENST00000589000 RAD54L2Q9Y4B4 1467 aa20.78■□□□□ 0.92
PQLC1-209ENST00000589000 ARHGEF11O15085 1522 aa20.77■□□□□ 0.92
PQLC1-209ENST00000589000 FGD5Q6ZNL6 1462 aa20.76■□□□□ 0.91
PQLC1-209ENST00000589000 CUX1P39880 1505 aa20.75■□□□□ 0.91
PQLC1-209ENST00000589000 TDRD9Q8NDG6 1382 aaKnown RBP20.72■□□□□ 0.91
PQLC1-209ENST00000589000 FBLN2P98095 1184 aa20.67■□□□□ 0.9
PQLC1-209ENST00000589000 SNAPC4Q5SXM2 1469 aa20.65■□□□□ 0.9
PQLC1-209ENST00000589000 MAGI1Q96QZ7 1491 aaPredicted RBP20.65■□□□□ 0.9
PQLC1-209ENST00000589000 SUPT5HO00267 1087 aaKnown RBP20.65■□□□□ 0.9
PQLC1-209ENST00000589000 GRIN2BQ13224 1484 aa20.63■□□□□ 0.89
PQLC1-209ENST00000589000 CYB5RLQ6IPT4 315 aa20.58■□□□□ 0.89
PQLC1-209ENST00000589000 SYNJ1O43426 1573 aa20.57■□□□□ 0.88
PQLC1-209ENST00000589000 CHMP7Q8WUX9 453 aaPredicted RBP20.57■□□□□ 0.88
PQLC1-209ENST00000589000 CLASP1Q7Z460 1538 aa20.57■□□□□ 0.88
PQLC1-209ENST00000589000 ABCA10Q8WWZ4 1543 aa20.57■□□□□ 0.88
PQLC1-209ENST00000589000 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
PQLC1-209ENST00000589000 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
PQLC1-209ENST00000589000 PBRM1Q86U86 1689 aa20.56■□□□□ 0.88
PQLC1-209ENST00000589000 GAPVD1Q14C86 1478 aa20.56■□□□□ 0.88
PQLC1-209ENST00000589000 ABCA5Q8WWZ7 1642 aa20.53■□□□□ 0.88
PQLC1-209ENST00000589000 WRNQ14191 1432 aaPredicted RBP eCLIP20.48■□□□□ 0.87
PQLC1-209ENST00000589000 BIVM-ERCC5R4GMW8 1640 aa20.48■□□□□ 0.87
PQLC1-209ENST00000589000 TOP2BQ02880 1626 aa20.46■□□□□ 0.87
PQLC1-209ENST00000589000 ADAMTS12P58397 1594 aa20.36■□□□□ 0.85
PQLC1-209ENST00000589000 GRIN2AQ12879 1464 aa20.36■□□□□ 0.85
PQLC1-209ENST00000589000 ERICH3Q5RHP9 1530 aa20.32■□□□□ 0.84
PQLC1-209ENST00000589000 TRHP20396 242 aaPredicted RBP20.32■□□□□ 0.84
PQLC1-209ENST00000589000 FHAD1B1AJZ9 1412 aa20.31■□□□□ 0.84
PQLC1-209ENST00000589000 NUP160Q12769 1436 aa20.3■□□□□ 0.84
PQLC1-209ENST00000589000 CEP170Q5SW79 1584 aa20.28■□□□□ 0.84
PQLC1-209ENST00000589000 SHROOM2Q13796 1616 aa20.23■□□□□ 0.83
PQLC1-209ENST00000589000 ERCC6L2Q5T890 1561 aa20.19■□□□□ 0.82
PQLC1-209ENST00000589000 JPH4Q96JJ6 628 aa20.08■□□□□ 0.81
PQLC1-209ENST00000589000 PRG4Q92954 1404 aaPredicted RBP20.07■□□□□ 0.8
PQLC1-209ENST00000589000 RUSC2Q8N2Y8 1516 aa20.07■□□□□ 0.8
PQLC1-209ENST00000589000 KIF27Q86VH2 1401 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms