RNA–Protein interactions for RNA: ENST00000588842.1

AC079779.3-201, humanhuman

TSL 5 BASIC

Gene AC079779.3, Length 1,200 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC079779.3-201ENST00000588842 NISCHQ9Y2I1 1504 aa29.41■■■□□ 2.3
AC079779.3-201ENST00000588842 AEBP2Q6ZN18 517 aaPredicted RBP27.74■■■□□ 2.03
AC079779.3-201ENST00000588842 CHIC1Q5VXU3 224 aa27.41■■□□□ 1.98
AC079779.3-201ENST00000588842 CCDC180Q9P1Z9 1646 aa26.08■■□□□ 1.77
AC079779.3-201ENST00000588842 ABCC9O60706 1549 aa25.53■■□□□ 1.68
AC079779.3-201ENST00000588842 DCAF8L2P0C7V8 631 aa24.67■■□□□ 1.54
AC079779.3-201ENST00000588842 ZCCHC6Q5VYS8 1495 aaKnown RBP24.51■■□□□ 1.51
AC079779.3-201ENST00000588842 RB1CC1Q8TDY2 1594 aa24.51■■□□□ 1.51
AC079779.3-201ENST00000588842 NACADO15069 1562 aa24.49■■□□□ 1.51
AC079779.3-201ENST00000588842 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
AC079779.3-201ENST00000588842 DCAF1Q9Y4B6 1507 aa24.26■■□□□ 1.47
AC079779.3-201ENST00000588842 PHF23Q9BUL5 403 aaPredicted RBP24.15■■□□□ 1.46
AC079779.3-201ENST00000588842 UNC13AQ9UPW8 1703 aa24.04■■□□□ 1.44
AC079779.3-201ENST00000588842 SCRIBQ14160 1630 aa23.91■■□□□ 1.42
AC079779.3-201ENST00000588842 PABPN1Q86U42 306 aaKnown RBP eCLIP23.89■■□□□ 1.41
AC079779.3-201ENST00000588842 BICRAQ9NZM4 1560 aa23.8■■□□□ 1.4
AC079779.3-201ENST00000588842 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
AC079779.3-201ENST00000588842 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
AC079779.3-201ENST00000588842 DNAJC5BQ9UF47 199 aa23.34■■□□□ 1.33
AC079779.3-201ENST00000588842 EIF4G1Q04637 1599 aaKnown RBP23.15■■□□□ 1.3
AC079779.3-201ENST00000588842 CC2D2AQ9P2K1 1620 aa23.06■■□□□ 1.28
AC079779.3-201ENST00000588842 CECR2Q9BXF3 1484 aa22.96■■□□□ 1.27
AC079779.3-201ENST00000588842 SMARCA4P51532 1647 aa22.82■■□□□ 1.24
AC079779.3-201ENST00000588842 BAZ1AQ9NRL2 1556 aaPredicted RBP22.78■■□□□ 1.24
AC079779.3-201ENST00000588842 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
AC079779.3-201ENST00000588842 ATAD2BQ9ULI0 1458 aa22.66■■□□□ 1.22
AC079779.3-201ENST00000588842 SMARCA2P51531 1590 aa22.61■■□□□ 1.21
AC079779.3-201ENST00000588842 NCAPD3P42695 1498 aa22.58■■□□□ 1.2
AC079779.3-201ENST00000588842 PEG3Q9GZU2 1588 aa22.53■■□□□ 1.2
AC079779.3-201ENST00000588842 WIZO95785 1651 aa22.51■■□□□ 1.19
AC079779.3-201ENST00000588842 BAZ1BQ9UIG0 1483 aaKnown RBP22.48■■□□□ 1.19
AC079779.3-201ENST00000588842 HMGXB3Q12766 1538 aa22.48■■□□□ 1.19
AC079779.3-201ENST00000588842 RSF1Q96T23 1441 aaPredicted RBP22.47■■□□□ 1.19
AC079779.3-201ENST00000588842 PLPPR3Q6T4P5 718 aa22.4■■□□□ 1.18
AC079779.3-201ENST00000588842 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
AC079779.3-201ENST00000588842 NESP48681 1621 aa22.13■■□□□ 1.13
AC079779.3-201ENST00000588842 SUPT5HO00267 1087 aaKnown RBP22.09■■□□□ 1.13
AC079779.3-201ENST00000588842 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
AC079779.3-201ENST00000588842 CCDC88BA6NC98 1476 aa21.97■■□□□ 1.11
AC079779.3-201ENST00000588842 ERCC6Q03468 1493 aa21.96■■□□□ 1.11
AC079779.3-201ENST00000588842 CADPSQ9ULU8 1353 aa21.96■■□□□ 1.11
AC079779.3-201ENST00000588842 KIF21AQ7Z4S6 1674 aa21.87■■□□□ 1.09
AC079779.3-201ENST00000588842 CFTRP13569 1480 aa21.84■■□□□ 1.09
AC079779.3-201ENST00000588842 PDS5BQ9NTI5 1447 aa21.84■■□□□ 1.09
AC079779.3-201ENST00000588842 FOXD1Q16676 465 aa21.75■■□□□ 1.07
AC079779.3-201ENST00000588842 FANCD2Q9BXW9 1451 aa21.74■■□□□ 1.07
AC079779.3-201ENST00000588842 PRDM2Q13029 1718 aa21.74■■□□□ 1.07
AC079779.3-201ENST00000588842 THOC2Q8NI27 1593 aaKnown RBP21.71■■□□□ 1.07
AC079779.3-201ENST00000588842 CEP164Q9UPV0 1460 aa21.7■■□□□ 1.06
AC079779.3-201ENST00000588842 MRC2Q9UBG0 1479 aa21.64■■□□□ 1.05
AC079779.3-201ENST00000588842 CUX2O14529 1486 aa21.62■■□□□ 1.05
AC079779.3-201ENST00000588842 WDR62O43379 1518 aa21.55■■□□□ 1.04
AC079779.3-201ENST00000588842 URB2Q14146 1524 aaKnown RBP21.53■■□□□ 1.04
AC079779.3-201ENST00000588842 TOPBP1Q92547 1522 aa21.4■■□□□ 1.02
AC079779.3-201ENST00000588842 DNMBPQ6XZF7 1577 aa21.37■■□□□ 1.01
AC079779.3-201ENST00000588842 ABCC8Q09428 1581 aa21.34■■□□□ 1.01
AC079779.3-201ENST00000588842 CUX1P39880 1505 aa21.29■■□□□ 1
AC079779.3-201ENST00000588842 POLA1P09884 1462 aaPredicted RBP21.23■□□□□ 0.99
AC079779.3-201ENST00000588842 IFT140Q96RY7 1462 aa21.21■□□□□ 0.99
AC079779.3-201ENST00000588842 FGD5Q6ZNL6 1462 aa21.2■□□□□ 0.98
AC079779.3-201ENST00000588842 PPP6R1Q9UPN7 881 aa21.2■□□□□ 0.98
AC079779.3-201ENST00000588842 ADRA2BP18089 450 aa21.19■□□□□ 0.98
AC079779.3-201ENST00000588842 WRNQ14191 1432 aaPredicted RBP eCLIP21.18■□□□□ 0.98
AC079779.3-201ENST00000588842 RAD54L2Q9Y4B4 1467 aa21.18■□□□□ 0.98
AC079779.3-201ENST00000588842 ZNF608Q9ULD9 1512 aaPredicted RBP21.17■□□□□ 0.98
AC079779.3-201ENST00000588842 TARBP1Q13395 1621 aaKnown RBP21.16■□□□□ 0.98
AC079779.3-201ENST00000588842 SYNJ1O43426 1573 aa21.16■□□□□ 0.98
AC079779.3-201ENST00000588842 SOGA1O94964 1423 aa21.14■□□□□ 0.98
AC079779.3-201ENST00000588842 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
AC079779.3-201ENST00000588842 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
AC079779.3-201ENST00000588842 EIF4G3O43432 1585 aaKnown RBP21.08■□□□□ 0.97
AC079779.3-201ENST00000588842 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.96
AC079779.3-201ENST00000588842 TDRD9Q8NDG6 1382 aaKnown RBP21.05■□□□□ 0.96
AC079779.3-201ENST00000588842 WDR97A6NE52 1622 aa21.02■□□□□ 0.96
AC079779.3-201ENST00000588842 ABCA10Q8WWZ4 1543 aa20.96■□□□□ 0.95
AC079779.3-201ENST00000588842 ABCA5Q8WWZ7 1642 aa20.89■□□□□ 0.94
AC079779.3-201ENST00000588842 GAPVD1Q14C86 1478 aa20.89■□□□□ 0.94
AC079779.3-201ENST00000588842 PBRM1Q86U86 1689 aa20.89■□□□□ 0.93
AC079779.3-201ENST00000588842 DNAJC5Q9H3Z4 198 aa20.87■□□□□ 0.93
AC079779.3-201ENST00000588842 GRIN2BQ13224 1484 aa20.87■□□□□ 0.93
AC079779.3-201ENST00000588842 SNAPC4Q5SXM2 1469 aa20.86■□□□□ 0.93
AC079779.3-201ENST00000588842 FBLN2P98095 1184 aa20.84■□□□□ 0.93
AC079779.3-201ENST00000588842 CHD1O14646 1710 aa20.84■□□□□ 0.93
AC079779.3-201ENST00000588842 TRIM41Q8WV44 630 aa20.79■□□□□ 0.92
AC079779.3-201ENST00000588842 MAGI1Q96QZ7 1491 aaPredicted RBP20.78■□□□□ 0.92
AC079779.3-201ENST00000588842 OSCARQ8IYS5 282 aa20.78■□□□□ 0.92
AC079779.3-201ENST00000588842 CHMP7Q8WUX9 453 aaPredicted RBP20.74■□□□□ 0.91
AC079779.3-201ENST00000588842 KIF27Q86VH2 1401 aa20.71■□□□□ 0.91
AC079779.3-201ENST00000588842 SYNJ2O15056 1496 aa20.71■□□□□ 0.91
AC079779.3-201ENST00000588842 ERICH3Q5RHP9 1530 aa20.7■□□□□ 0.9
AC079779.3-201ENST00000588842 ADAMTS12P58397 1594 aa20.69■□□□□ 0.9
AC079779.3-201ENST00000588842 RUSC2Q8N2Y8 1516 aa20.64■□□□□ 0.9
AC079779.3-201ENST00000588842 FHAD1B1AJZ9 1412 aa20.64■□□□□ 0.89
AC079779.3-201ENST00000588842 IGF1RP08069 1367 aa20.62■□□□□ 0.89
AC079779.3-201ENST00000588842 GRIN2AQ12879 1464 aa20.61■□□□□ 0.89
AC079779.3-201ENST00000588842 PIAS4Q8N2W9 510 aaPredicted RBP20.58■□□□□ 0.89
AC079779.3-201ENST00000588842 CUL7Q14999 1698 aa20.56■□□□□ 0.88
AC079779.3-201ENST00000588842 CLASP1Q7Z460 1538 aa20.53■□□□□ 0.88
AC079779.3-201ENST00000588842 CEP170Q5SW79 1584 aa20.53■□□□□ 0.88
AC079779.3-201ENST00000588842 CARMIL1Q5VZK9 1371 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms