RNA–Protein interactions for RNA: ENST00000588772.1

ATP9B-214, Transcript of ATPase phospholipid transporting 9B (putative), humanhuman

TSL 3

Gene ATP9B, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9B-214ENST00000588772 NISCHQ9Y2I1 1504 aa29.45■■■□□ 2.31
ATP9B-214ENST00000588772 CCDC180Q9P1Z9 1646 aa26.07■■□□□ 1.76
ATP9B-214ENST00000588772 ABCC9O60706 1549 aa25.63■■□□□ 1.69
ATP9B-214ENST00000588772 DCAF8L2P0C7V8 631 aa24.75■■□□□ 1.55
ATP9B-214ENST00000588772 RB1CC1Q8TDY2 1594 aa24.6■■□□□ 1.53
ATP9B-214ENST00000588772 NACADO15069 1562 aa24.59■■□□□ 1.53
ATP9B-214ENST00000588772 ZCCHC6Q5VYS8 1495 aaKnown RBP24.51■■□□□ 1.51
ATP9B-214ENST00000588772 MYO15BQ96JP2 1530 aa24.45■■□□□ 1.51
ATP9B-214ENST00000588772 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
ATP9B-214ENST00000588772 PABPN1Q86U42 306 aaKnown RBP eCLIP24.04■■□□□ 1.44
ATP9B-214ENST00000588772 UNC13AQ9UPW8 1703 aa23.95■■□□□ 1.42
ATP9B-214ENST00000588772 BICRAQ9NZM4 1560 aa23.86■■□□□ 1.41
ATP9B-214ENST00000588772 SCRIBQ14160 1630 aa23.84■■□□□ 1.41
ATP9B-214ENST00000588772 DNAJC5BQ9UF47 199 aa23.64■■□□□ 1.37
ATP9B-214ENST00000588772 SHROOM4Q9ULL8 1493 aa23.6■■□□□ 1.37
ATP9B-214ENST00000588772 EIF4G1Q04637 1599 aaKnown RBP23.23■■□□□ 1.31
ATP9B-214ENST00000588772 CC2D2AQ9P2K1 1620 aa23.14■■□□□ 1.29
ATP9B-214ENST00000588772 CECR2Q9BXF3 1484 aa23.03■■□□□ 1.28
ATP9B-214ENST00000588772 BAZ1AQ9NRL2 1556 aaPredicted RBP22.8■■□□□ 1.24
ATP9B-214ENST00000588772 SMARCA4P51532 1647 aa22.8■■□□□ 1.24
ATP9B-214ENST00000588772 NCAPD3P42695 1498 aa22.75■■□□□ 1.23
ATP9B-214ENST00000588772 ATAD2BQ9ULI0 1458 aa22.75■■□□□ 1.23
ATP9B-214ENST00000588772 MROH2BQ7Z745 1585 aa22.71■■□□□ 1.23
ATP9B-214ENST00000588772 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
ATP9B-214ENST00000588772 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
ATP9B-214ENST00000588772 HMGXB3Q12766 1538 aa22.56■■□□□ 1.2
ATP9B-214ENST00000588772 BAZ1BQ9UIG0 1483 aaKnown RBP22.54■■□□□ 1.2
ATP9B-214ENST00000588772 RSF1Q96T23 1441 aaPredicted RBP22.49■■□□□ 1.19
ATP9B-214ENST00000588772 WIZO95785 1651 aa22.42■■□□□ 1.18
ATP9B-214ENST00000588772 NESP48681 1621 aa22.18■■□□□ 1.14
ATP9B-214ENST00000588772 TOP2AP11388 1531 aaKnown RBP22.18■■□□□ 1.14
ATP9B-214ENST00000588772 CADPSQ9ULU8 1353 aa22.12■■□□□ 1.13
ATP9B-214ENST00000588772 ERCC6Q03468 1493 aa22.08■■□□□ 1.12
ATP9B-214ENST00000588772 LAMC3Q9Y6N6 1575 aa22.07■■□□□ 1.12
ATP9B-214ENST00000588772 PDS5BQ9NTI5 1447 aa22■■□□□ 1.11
ATP9B-214ENST00000588772 SUPT5HO00267 1087 aaKnown RBP22■■□□□ 1.11
ATP9B-214ENST00000588772 CCDC88BA6NC98 1476 aa21.99■■□□□ 1.11
ATP9B-214ENST00000588772 CFTRP13569 1480 aa21.95■■□□□ 1.1
ATP9B-214ENST00000588772 CUX2O14529 1486 aa21.83■■□□□ 1.08
ATP9B-214ENST00000588772 FANCD2Q9BXW9 1451 aa21.81■■□□□ 1.08
ATP9B-214ENST00000588772 KIF21AQ7Z4S6 1674 aa21.81■■□□□ 1.08
ATP9B-214ENST00000588772 CEP164Q9UPV0 1460 aa21.76■■□□□ 1.07
ATP9B-214ENST00000588772 THOC2Q8NI27 1593 aaKnown RBP21.75■■□□□ 1.07
ATP9B-214ENST00000588772 MRC2Q9UBG0 1479 aa21.73■■□□□ 1.07
ATP9B-214ENST00000588772 WDR62O43379 1518 aa21.63■■□□□ 1.05
ATP9B-214ENST00000588772 PRDM2Q13029 1718 aa21.59■■□□□ 1.05
ATP9B-214ENST00000588772 URB2Q14146 1524 aaKnown RBP21.59■■□□□ 1.05
ATP9B-214ENST00000588772 ABCC8Q09428 1581 aa21.46■■□□□ 1.03
ATP9B-214ENST00000588772 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
ATP9B-214ENST00000588772 DNMBPQ6XZF7 1577 aa21.39■■□□□ 1.01
ATP9B-214ENST00000588772 IFT140Q96RY7 1462 aa21.32■■□□□ 1
ATP9B-214ENST00000588772 CUX1P39880 1505 aa21.29■■□□□ 1
ATP9B-214ENST00000588772 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
ATP9B-214ENST00000588772 DNAJC5Q9H3Z4 198 aa21.27■■□□□ 1
ATP9B-214ENST00000588772 SOGA1O94964 1423 aa21.24■□□□□ 0.99
ATP9B-214ENST00000588772 ZNF608Q9ULD9 1512 aaPredicted RBP21.24■□□□□ 0.99
ATP9B-214ENST00000588772 FGD5Q6ZNL6 1462 aa21.21■□□□□ 0.99
ATP9B-214ENST00000588772 RAD54L2Q9Y4B4 1467 aa21.21■□□□□ 0.99
ATP9B-214ENST00000588772 WRNQ14191 1432 aaPredicted RBP eCLIP21.19■□□□□ 0.98
ATP9B-214ENST00000588772 TARBP1Q13395 1621 aaKnown RBP21.18■□□□□ 0.98
ATP9B-214ENST00000588772 AQRO60306 1485 aaKnown RBP eCLIP21.15■□□□□ 0.98
ATP9B-214ENST00000588772 TDRD9Q8NDG6 1382 aaKnown RBP21.13■□□□□ 0.97
ATP9B-214ENST00000588772 TOP2BQ02880 1626 aa21.07■□□□□ 0.96
ATP9B-214ENST00000588772 SYNJ1O43426 1573 aa21.07■□□□□ 0.96
ATP9B-214ENST00000588772 EIF4G3O43432 1585 aaKnown RBP21.06■□□□□ 0.96
ATP9B-214ENST00000588772 OSCARQ8IYS5 282 aa21.05■□□□□ 0.96
ATP9B-214ENST00000588772 BIVM-ERCC5R4GMW8 1640 aa21.04■□□□□ 0.96
ATP9B-214ENST00000588772 ABCA10Q8WWZ4 1543 aa21.02■□□□□ 0.96
ATP9B-214ENST00000588772 WDR97A6NE52 1622 aa20.97■□□□□ 0.95
ATP9B-214ENST00000588772 GAPVD1Q14C86 1478 aa20.96■□□□□ 0.95
ATP9B-214ENST00000588772 GRIN2BQ13224 1484 aa20.95■□□□□ 0.94
ATP9B-214ENST00000588772 FBLN2P98095 1184 aa20.94■□□□□ 0.94
ATP9B-214ENST00000588772 SNAPC4Q5SXM2 1469 aa20.9■□□□□ 0.94
ATP9B-214ENST00000588772 CHMP7Q8WUX9 453 aaPredicted RBP20.89■□□□□ 0.93
ATP9B-214ENST00000588772 ABCA5Q8WWZ7 1642 aa20.87■□□□□ 0.93
ATP9B-214ENST00000588772 MAGI1Q96QZ7 1491 aaPredicted RBP20.87■□□□□ 0.93
ATP9B-214ENST00000588772 SYNJ2O15056 1496 aa20.8■□□□□ 0.92
ATP9B-214ENST00000588772 PBRM1Q86U86 1689 aa20.78■□□□□ 0.92
ATP9B-214ENST00000588772 TRIM41Q8WV44 630 aa20.78■□□□□ 0.92
ATP9B-214ENST00000588772 CHD1O14646 1710 aa20.77■□□□□ 0.92
ATP9B-214ENST00000588772 KIF27Q86VH2 1401 aa20.76■□□□□ 0.91
ATP9B-214ENST00000588772 ERICH3Q5RHP9 1530 aa20.74■□□□□ 0.91
ATP9B-214ENST00000588772 IGF1RP08069 1367 aa20.72■□□□□ 0.91
ATP9B-214ENST00000588772 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
ATP9B-214ENST00000588772 ADAMTS12P58397 1594 aa20.67■□□□□ 0.9
ATP9B-214ENST00000588772 GRIN2AQ12879 1464 aa20.66■□□□□ 0.9
ATP9B-214ENST00000588772 CLASP1Q7Z460 1538 aa20.6■□□□□ 0.89
ATP9B-214ENST00000588772 NUP160Q12769 1436 aa20.59■□□□□ 0.89
ATP9B-214ENST00000588772 CARMIL1Q5VZK9 1371 aa20.59■□□□□ 0.89
ATP9B-214ENST00000588772 ARHGEF11O15085 1522 aa20.58■□□□□ 0.89
ATP9B-214ENST00000588772 RUSC2Q8N2Y8 1516 aa20.58■□□□□ 0.89
ATP9B-214ENST00000588772 RIMBP3CA6NJZ7 1639 aa20.55■□□□□ 0.88
ATP9B-214ENST00000588772 RIMBP3BA6NNM3 1639 aa20.55■□□□□ 0.88
ATP9B-214ENST00000588772 RIMBP3Q9UFD9 1639 aa20.55■□□□□ 0.88
ATP9B-214ENST00000588772 CHIC1Q5VXU3 224 aa20.54■□□□□ 0.88
ATP9B-214ENST00000588772 CEP170Q5SW79 1584 aa20.53■□□□□ 0.88
ATP9B-214ENST00000588772 CYB5RLQ6IPT4 315 aa20.52■□□□□ 0.88
ATP9B-214ENST00000588772 CUL7Q14999 1698 aa20.5■□□□□ 0.87
ATP9B-214ENST00000588772 JPH4Q96JJ6 628 aa20.48■□□□□ 0.87
ATP9B-214ENST00000588772 ARAP1Q96P48 1450 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms