RNA–Protein interactions for RNA: ENST00000588594.5

RAD51D-216, Transcript of RAD51 paralog D, humanhuman

TSL 2

Gene RAD51D, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51D-216ENST00000588594 NISCHQ9Y2I1 1504 aa37.09■■■■□ 3.53
RAD51D-216ENST00000588594 CCDC180Q9P1Z9 1646 aa33.12■■■□□ 2.89
RAD51D-216ENST00000588594 ABCC9O60706 1549 aa32.62■■■□□ 2.81
RAD51D-216ENST00000588594 RB1CC1Q8TDY2 1594 aa31.31■■■□□ 2.6
RAD51D-216ENST00000588594 NACADO15069 1562 aa31.22■■■□□ 2.59
RAD51D-216ENST00000588594 DCAF8L2P0C7V8 631 aa31.08■■■□□ 2.57
RAD51D-216ENST00000588594 MYO15BQ96JP2 1530 aa30.97■■■□□ 2.55
RAD51D-216ENST00000588594 ZCCHC6Q5VYS8 1495 aaKnown RBP30.84■■■□□ 2.53
RAD51D-216ENST00000588594 DCAF1Q9Y4B6 1507 aa30.72■■■□□ 2.51
RAD51D-216ENST00000588594 UNC13AQ9UPW8 1703 aa30.51■■■□□ 2.47
RAD51D-216ENST00000588594 PABPN1Q86U42 306 aaKnown RBP eCLIP30.4■■■□□ 2.46
RAD51D-216ENST00000588594 BICRAQ9NZM4 1560 aa30.31■■■□□ 2.44
RAD51D-216ENST00000588594 SCRIBQ14160 1630 aa30.14■■■□□ 2.42
RAD51D-216ENST00000588594 DNAJC5BQ9UF47 199 aa30.13■■■□□ 2.41
RAD51D-216ENST00000588594 SHROOM4Q9ULL8 1493 aa30.09■■■□□ 2.41
RAD51D-216ENST00000588594 EIF4G1Q04637 1599 aaKnown RBP29.56■■■□□ 2.32
RAD51D-216ENST00000588594 CC2D2AQ9P2K1 1620 aa29.5■■■□□ 2.31
RAD51D-216ENST00000588594 CECR2Q9BXF3 1484 aa29.37■■■□□ 2.29
RAD51D-216ENST00000588594 SMARCA4P51532 1647 aa28.83■■■□□ 2.2
RAD51D-216ENST00000588594 BAZ1AQ9NRL2 1556 aaPredicted RBP28.8■■■□□ 2.2
RAD51D-216ENST00000588594 NCAPD3P42695 1498 aa28.79■■■□□ 2.2
RAD51D-216ENST00000588594 ATAD2BQ9ULI0 1458 aa28.75■■■□□ 2.19
RAD51D-216ENST00000588594 SMARCA2P51531 1590 aa28.73■■■□□ 2.19
RAD51D-216ENST00000588594 HMGXB3Q12766 1538 aa28.64■■■□□ 2.17
RAD51D-216ENST00000588594 PEG3Q9GZU2 1588 aa28.58■■■□□ 2.17
RAD51D-216ENST00000588594 MROH2BQ7Z745 1585 aa28.54■■■□□ 2.16
RAD51D-216ENST00000588594 BAZ1BQ9UIG0 1483 aaKnown RBP28.52■■■□□ 2.16
RAD51D-216ENST00000588594 WIZO95785 1651 aa28.21■■■□□ 2.11
RAD51D-216ENST00000588594 ERCC6Q03468 1493 aa28.18■■■□□ 2.1
RAD51D-216ENST00000588594 RSF1Q96T23 1441 aaPredicted RBP28.13■■■□□ 2.09
RAD51D-216ENST00000588594 NESP48681 1621 aa28.12■■■□□ 2.09
RAD51D-216ENST00000588594 LAMC3Q9Y6N6 1575 aa28.09■■■□□ 2.09
RAD51D-216ENST00000588594 CUX2O14529 1486 aa28■■■□□ 2.07
RAD51D-216ENST00000588594 TOP2AP11388 1531 aaKnown RBP27.95■■■□□ 2.06
RAD51D-216ENST00000588594 CADPSQ9ULU8 1353 aa27.94■■■□□ 2.06
RAD51D-216ENST00000588594 PDS5BQ9NTI5 1447 aa27.93■■■□□ 2.06
RAD51D-216ENST00000588594 THOC2Q8NI27 1593 aaKnown RBP27.78■■■□□ 2.04
RAD51D-216ENST00000588594 KIF21AQ7Z4S6 1674 aa27.78■■■□□ 2.04
RAD51D-216ENST00000588594 CFTRP13569 1480 aa27.71■■■□□ 2.03
RAD51D-216ENST00000588594 MRC2Q9UBG0 1479 aa27.63■■■□□ 2.01
RAD51D-216ENST00000588594 CEP164Q9UPV0 1460 aa27.61■■■□□ 2.01
RAD51D-216ENST00000588594 FANCD2Q9BXW9 1451 aa27.6■■■□□ 2.01
RAD51D-216ENST00000588594 CCDC88BA6NC98 1476 aa27.6■■■□□ 2.01
RAD51D-216ENST00000588594 WDR62O43379 1518 aa27.54■■■□□ 2
RAD51D-216ENST00000588594 PRDM2Q13029 1718 aa27.46■■□□□ 1.99
RAD51D-216ENST00000588594 DNAJC5Q9H3Z4 198 aa27.43■■□□□ 1.98
RAD51D-216ENST00000588594 URB2Q14146 1524 aaKnown RBP27.31■■□□□ 1.96
RAD51D-216ENST00000588594 SUPT5HO00267 1087 aaKnown RBP27.21■■□□□ 1.95
RAD51D-216ENST00000588594 ABCC8Q09428 1581 aa27.18■■□□□ 1.94
RAD51D-216ENST00000588594 TOPBP1Q92547 1522 aa27.13■■□□□ 1.93
RAD51D-216ENST00000588594 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
RAD51D-216ENST00000588594 IFT140Q96RY7 1462 aa27.05■■□□□ 1.92
RAD51D-216ENST00000588594 ZNF608Q9ULD9 1512 aaPredicted RBP26.89■■□□□ 1.89
RAD51D-216ENST00000588594 POLA1P09884 1462 aaPredicted RBP26.88■■□□□ 1.89
RAD51D-216ENST00000588594 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.89
RAD51D-216ENST00000588594 EIF4G3O43432 1585 aaKnown RBP26.8■■□□□ 1.88
RAD51D-216ENST00000588594 CUX1P39880 1505 aa26.8■■□□□ 1.88
RAD51D-216ENST00000588594 OSCARQ8IYS5 282 aa26.78■■□□□ 1.88
RAD51D-216ENST00000588594 SOGA1O94964 1423 aa26.78■■□□□ 1.88
RAD51D-216ENST00000588594 FGD5Q6ZNL6 1462 aa26.78■■□□□ 1.88
RAD51D-216ENST00000588594 RAD54L2Q9Y4B4 1467 aa26.73■■□□□ 1.87
RAD51D-216ENST00000588594 AQRO60306 1485 aaKnown RBP eCLIP26.71■■□□□ 1.874e-7■■■■□ 26
RAD51D-216ENST00000588594 WDR97A6NE52 1622 aa26.68■■□□□ 1.86
RAD51D-216ENST00000588594 TDRD9Q8NDG6 1382 aaKnown RBP26.63■■□□□ 1.85
RAD51D-216ENST00000588594 WRNQ14191 1432 aaPredicted RBP eCLIP26.57■■□□□ 1.845e-11■■■■■ 40
RAD51D-216ENST00000588594 TOP2BQ02880 1626 aa26.52■■□□□ 1.84
RAD51D-216ENST00000588594 ABCA10Q8WWZ4 1543 aa26.52■■□□□ 1.84
RAD51D-216ENST00000588594 BIVM-ERCC5R4GMW8 1640 aa26.52■■□□□ 1.84
RAD51D-216ENST00000588594 GRIN2BQ13224 1484 aa26.51■■□□□ 1.83
RAD51D-216ENST00000588594 CHD1O14646 1710 aa26.49■■□□□ 1.83
RAD51D-216ENST00000588594 FBLN2P98095 1184 aa26.48■■□□□ 1.83
RAD51D-216ENST00000588594 SNAPC4Q5SXM2 1469 aa26.47■■□□□ 1.83
RAD51D-216ENST00000588594 MAGI1Q96QZ7 1491 aaPredicted RBP26.47■■□□□ 1.83
RAD51D-216ENST00000588594 SYNJ1O43426 1573 aa26.46■■□□□ 1.83
RAD51D-216ENST00000588594 GAPVD1Q14C86 1478 aa26.46■■□□□ 1.83
RAD51D-216ENST00000588594 ABCA5Q8WWZ7 1642 aa26.42■■□□□ 1.82
RAD51D-216ENST00000588594 PBRM1Q86U86 1689 aa26.4■■□□□ 1.82
RAD51D-216ENST00000588594 CHMP7Q8WUX9 453 aaPredicted RBP26.39■■□□□ 1.81
RAD51D-216ENST00000588594 TRIM41Q8WV44 630 aa26.38■■□□□ 1.81
RAD51D-216ENST00000588594 SYNJ2O15056 1496 aa26.37■■□□□ 1.81
RAD51D-216ENST00000588594 RIMBP3CA6NJZ7 1639 aa26.33■■□□□ 1.8
RAD51D-216ENST00000588594 RIMBP3BA6NNM3 1639 aa26.33■■□□□ 1.8
RAD51D-216ENST00000588594 RIMBP3Q9UFD9 1639 aa26.33■■□□□ 1.8
RAD51D-216ENST00000588594 ARHGEF11O15085 1522 aa26.32■■□□□ 1.8
RAD51D-216ENST00000588594 CLASP1Q7Z460 1538 aa26.23■■□□□ 1.79
RAD51D-216ENST00000588594 ERICH3Q5RHP9 1530 aa26.21■■□□□ 1.79
RAD51D-216ENST00000588594 ADAMTS12P58397 1594 aa26.18■■□□□ 1.78
RAD51D-216ENST00000588594 FHAD1B1AJZ9 1412 aa26.16■■□□□ 1.78
RAD51D-216ENST00000588594 GRIN2AQ12879 1464 aa26.16■■□□□ 1.78
RAD51D-216ENST00000588594 CYB5RLQ6IPT4 315 aa26.08■■□□□ 1.77
RAD51D-216ENST00000588594 ARAP1Q96P48 1450 aa26.07■■□□□ 1.76
RAD51D-216ENST00000588594 NUP160Q12769 1436 aa26.05■■□□□ 1.76
RAD51D-216ENST00000588594 KIF27Q86VH2 1401 aa26.05■■□□□ 1.76
RAD51D-216ENST00000588594 CEP170Q5SW79 1584 aa26■■□□□ 1.75
RAD51D-216ENST00000588594 IGF1RP08069 1367 aa25.94■■□□□ 1.74
RAD51D-216ENST00000588594 CUL7Q14999 1698 aa25.92■■□□□ 1.74
RAD51D-216ENST00000588594 SHROOM2Q13796 1616 aa25.87■■□□□ 1.73
RAD51D-216ENST00000588594 RUSC2Q8N2Y8 1516 aa25.81■■□□□ 1.72
RAD51D-216ENST00000588594 CARMIL1Q5VZK9 1371 aa25.8■■□□□ 1.72
RAD51D-216ENST00000588594 JPH4Q96JJ6 628 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms