RNA–Protein interactions for RNA: ENST00000588508.1

LGALS3BP-210, Transcript of galectin 3 binding protein, humanhuman

TSL 2

Gene LGALS3BP, Length 882 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGALS3BP-210ENST00000588508 NISCHQ9Y2I1 1504 aa36.52■■■■□ 3.44
LGALS3BP-210ENST00000588508 CCDC180Q9P1Z9 1646 aa32.75■■■□□ 2.83
LGALS3BP-210ENST00000588508 ABCC9O60706 1549 aa32.41■■■□□ 2.78
LGALS3BP-210ENST00000588508 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
LGALS3BP-210ENST00000588508 NACADO15069 1562 aa30.95■■■□□ 2.54
LGALS3BP-210ENST00000588508 DCAF8L2P0C7V8 631 aa30.7■■■□□ 2.51
LGALS3BP-210ENST00000588508 MYO15BQ96JP2 1530 aa30.67■■■□□ 2.5
LGALS3BP-210ENST00000588508 DCAF1Q9Y4B6 1507 aa30.29■■■□□ 2.44
LGALS3BP-210ENST00000588508 ZCCHC6Q5VYS8 1495 aaKnown RBP30.29■■■□□ 2.44
LGALS3BP-210ENST00000588508 UNC13AQ9UPW8 1703 aa30.23■■■□□ 2.43
LGALS3BP-210ENST00000588508 DNAJC5BQ9UF47 199 aa30.2■■■□□ 2.43
LGALS3BP-210ENST00000588508 PABPN1Q86U42 306 aaKnown RBP eCLIP30.19■■■□□ 2.42
LGALS3BP-210ENST00000588508 BICRAQ9NZM4 1560 aa30.05■■■□□ 2.4
LGALS3BP-210ENST00000588508 SHROOM4Q9ULL8 1493 aa29.92■■■□□ 2.38
LGALS3BP-210ENST00000588508 SCRIBQ14160 1630 aa29.68■■■□□ 2.34
LGALS3BP-210ENST00000588508 EIF4G1Q04637 1599 aaKnown RBP29.35■■■□□ 2.29
LGALS3BP-210ENST00000588508 CC2D2AQ9P2K1 1620 aa29.34■■■□□ 2.29
LGALS3BP-210ENST00000588508 CECR2Q9BXF3 1484 aa29.26■■■□□ 2.27
LGALS3BP-210ENST00000588508 NCAPD3P42695 1498 aa28.56■■■□□ 2.16
LGALS3BP-210ENST00000588508 SMARCA2P51531 1590 aa28.44■■■□□ 2.14
LGALS3BP-210ENST00000588508 ATAD2BQ9ULI0 1458 aa28.42■■■□□ 2.14
LGALS3BP-210ENST00000588508 SMARCA4P51532 1647 aa28.42■■■□□ 2.14
LGALS3BP-210ENST00000588508 BAZ1AQ9NRL2 1556 aaPredicted RBP28.39■■■□□ 2.14
LGALS3BP-210ENST00000588508 HMGXB3Q12766 1538 aa28.34■■■□□ 2.13
LGALS3BP-210ENST00000588508 PEG3Q9GZU2 1588 aa28.23■■■□□ 2.11
LGALS3BP-210ENST00000588508 BAZ1BQ9UIG0 1483 aaKnown RBP28.18■■■□□ 2.1
LGALS3BP-210ENST00000588508 ERCC6Q03468 1493 aa28.08■■■□□ 2.09
LGALS3BP-210ENST00000588508 MROH2BQ7Z745 1585 aa28.06■■■□□ 2.08
LGALS3BP-210ENST00000588508 CUX2O14529 1486 aa28.02■■■□□ 2.08
LGALS3BP-210ENST00000588508 LAMC3Q9Y6N6 1575 aa27.88■■■□□ 2.05
LGALS3BP-210ENST00000588508 NESP48681 1621 aa27.86■■■□□ 2.05
LGALS3BP-210ENST00000588508 DNAJC5Q9H3Z4 198 aa27.78■■■□□ 2.04
LGALS3BP-210ENST00000588508 PDS5BQ9NTI5 1447 aa27.75■■■□□ 2.03
LGALS3BP-210ENST00000588508 WIZO95785 1651 aa27.71■■■□□ 2.03
LGALS3BP-210ENST00000588508 CADPSQ9ULU8 1353 aa27.68■■■□□ 2.02
LGALS3BP-210ENST00000588508 RSF1Q96T23 1441 aaPredicted RBP27.6■■■□□ 2.01
LGALS3BP-210ENST00000588508 THOC2Q8NI27 1593 aaKnown RBP27.6■■■□□ 2.01
LGALS3BP-210ENST00000588508 KIF21AQ7Z4S6 1674 aa27.54■■■□□ 2
LGALS3BP-210ENST00000588508 TOP2AP11388 1531 aaKnown RBP27.46■■□□□ 1.99
LGALS3BP-210ENST00000588508 MRC2Q9UBG0 1479 aa27.42■■□□□ 1.98
LGALS3BP-210ENST00000588508 CFTRP13569 1480 aa27.39■■□□□ 1.98
LGALS3BP-210ENST00000588508 CEP164Q9UPV0 1460 aa27.35■■□□□ 1.97
LGALS3BP-210ENST00000588508 WDR62O43379 1518 aa27.33■■□□□ 1.97
LGALS3BP-210ENST00000588508 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
LGALS3BP-210ENST00000588508 CCDC88BA6NC98 1476 aa27.13■■□□□ 1.93
LGALS3BP-210ENST00000588508 PRDM2Q13029 1718 aa27.11■■□□□ 1.93
LGALS3BP-210ENST00000588508 URB2Q14146 1524 aaKnown RBP27.02■■□□□ 1.92
LGALS3BP-210ENST00000588508 ABCC8Q09428 1581 aa26.94■■□□□ 1.9
LGALS3BP-210ENST00000588508 IFT140Q96RY7 1462 aa26.83■■□□□ 1.89
LGALS3BP-210ENST00000588508 OSCARQ8IYS5 282 aa26.81■■□□□ 1.88
LGALS3BP-210ENST00000588508 TOPBP1Q92547 1522 aa26.8■■□□□ 1.88
LGALS3BP-210ENST00000588508 DNMBPQ6XZF7 1577 aa26.75■■□□□ 1.87
LGALS3BP-210ENST00000588508 ZNF608Q9ULD9 1512 aaPredicted RBP26.63■■□□□ 1.85
LGALS3BP-210ENST00000588508 TARBP1Q13395 1621 aaKnown RBP26.54■■□□□ 1.84
LGALS3BP-210ENST00000588508 POLA1P09884 1462 aaPredicted RBP26.53■■□□□ 1.84
LGALS3BP-210ENST00000588508 EIF4G3O43432 1585 aaKnown RBP26.53■■□□□ 1.84
LGALS3BP-210ENST00000588508 TRIM41Q8WV44 630 aa26.51■■□□□ 1.83
LGALS3BP-210ENST00000588508 SOGA1O94964 1423 aa26.47■■□□□ 1.83
LGALS3BP-210ENST00000588508 SUPT5HO00267 1087 aaKnown RBP26.46■■□□□ 1.83
LGALS3BP-210ENST00000588508 WDR97A6NE52 1622 aa26.45■■□□□ 1.82
LGALS3BP-210ENST00000588508 AQRO60306 1485 aaKnown RBP eCLIP26.44■■□□□ 1.825e-7■■■■□ 19.5
LGALS3BP-210ENST00000588508 FGD5Q6ZNL6 1462 aa26.38■■□□□ 1.81
LGALS3BP-210ENST00000588508 RAD54L2Q9Y4B4 1467 aa26.36■■□□□ 1.81
LGALS3BP-210ENST00000588508 CUX1P39880 1505 aa26.36■■□□□ 1.81
LGALS3BP-210ENST00000588508 TDRD9Q8NDG6 1382 aaKnown RBP26.33■■□□□ 1.8
LGALS3BP-210ENST00000588508 RIMBP3CA6NJZ7 1639 aa26.28■■□□□ 1.8
LGALS3BP-210ENST00000588508 RIMBP3BA6NNM3 1639 aa26.28■■□□□ 1.8
LGALS3BP-210ENST00000588508 RIMBP3Q9UFD9 1639 aa26.28■■□□□ 1.8
LGALS3BP-210ENST00000588508 CHD1O14646 1710 aa26.28■■□□□ 1.8
LGALS3BP-210ENST00000588508 FBLN2P98095 1184 aa26.27■■□□□ 1.8
LGALS3BP-210ENST00000588508 ARHGEF11O15085 1522 aa26.24■■□□□ 1.79
LGALS3BP-210ENST00000588508 MAGI1Q96QZ7 1491 aaPredicted RBP26.24■■□□□ 1.79
LGALS3BP-210ENST00000588508 GRIN2BQ13224 1484 aa26.23■■□□□ 1.79
LGALS3BP-210ENST00000588508 CHMP7Q8WUX9 453 aaPredicted RBP26.19■■□□□ 1.78
LGALS3BP-210ENST00000588508 SNAPC4Q5SXM2 1469 aa26.18■■□□□ 1.78
LGALS3BP-210ENST00000588508 ABCA10Q8WWZ4 1543 aa26.16■■□□□ 1.78
LGALS3BP-210ENST00000588508 GAPVD1Q14C86 1478 aa26.14■■□□□ 1.78
LGALS3BP-210ENST00000588508 WRNQ14191 1432 aaPredicted RBP eCLIP26.14■■□□□ 1.77
LGALS3BP-210ENST00000588508 SYNJ2O15056 1496 aa26.13■■□□□ 1.77
LGALS3BP-210ENST00000588508 SYNJ1O43426 1573 aa26.1■■□□□ 1.77
LGALS3BP-210ENST00000588508 TOP2BQ02880 1626 aa26.06■■□□□ 1.76
LGALS3BP-210ENST00000588508 CYB5RLQ6IPT4 315 aa26.06■■□□□ 1.76
LGALS3BP-210ENST00000588508 BIVM-ERCC5R4GMW8 1640 aa26.05■■□□□ 1.76
LGALS3BP-210ENST00000588508 PBRM1Q86U86 1689 aa26.05■■□□□ 1.76
LGALS3BP-210ENST00000588508 ABCA5Q8WWZ7 1642 aa26.04■■□□□ 1.76
LGALS3BP-210ENST00000588508 CLASP1Q7Z460 1538 aa26.03■■□□□ 1.76
LGALS3BP-210ENST00000588508 ARAP1Q96P48 1450 aa25.96■■□□□ 1.75
LGALS3BP-210ENST00000588508 ERICH3Q5RHP9 1530 aa25.87■■□□□ 1.73
LGALS3BP-210ENST00000588508 GRIN2AQ12879 1464 aa25.86■■□□□ 1.73
LGALS3BP-210ENST00000588508 FHAD1B1AJZ9 1412 aa25.86■■□□□ 1.73
LGALS3BP-210ENST00000588508 ADAMTS12P58397 1594 aa25.82■■□□□ 1.72
LGALS3BP-210ENST00000588508 NUP160Q12769 1436 aa25.78■■□□□ 1.72
LGALS3BP-210ENST00000588508 TRHP20396 242 aaPredicted RBP25.73■■□□□ 1.71
LGALS3BP-210ENST00000588508 CEP170Q5SW79 1584 aa25.69■■□□□ 1.7
LGALS3BP-210ENST00000588508 SHROOM2Q13796 1616 aa25.63■■□□□ 1.69
LGALS3BP-210ENST00000588508 KIF27Q86VH2 1401 aa25.62■■□□□ 1.69
LGALS3BP-210ENST00000588508 JPH4Q96JJ6 628 aa25.55■■□□□ 1.68
LGALS3BP-210ENST00000588508 IGF1RP08069 1367 aa25.54■■□□□ 1.68
LGALS3BP-210ENST00000588508 CUL7Q14999 1698 aa25.52■■□□□ 1.68
LGALS3BP-210ENST00000588508 ERCC6L2Q5T890 1561 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms