RNA–Protein interactions for RNA: ENST00000588491.1

TNPO2-212, Transcript of transportin 2, humanhuman

TSL 5

Gene TNPO2, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-212ENST00000588491 NISCHQ9Y2I1 1504 aa40.36■■■■■ 4.05
TNPO2-212ENST00000588491 ABCC9O60706 1549 aa36.56■■■■□ 3.44
TNPO2-212ENST00000588491 CCDC180Q9P1Z9 1646 aa36.34■■■■□ 3.41
TNPO2-212ENST00000588491 RB1CC1Q8TDY2 1594 aa34.71■■■■□ 3.15
TNPO2-212ENST00000588491 NACADO15069 1562 aa34.4■■■■□ 3.1
TNPO2-212ENST00000588491 DNAJC5BQ9UF47 199 aa34.39■■■■□ 3.1
TNPO2-212ENST00000588491 DCAF8L2P0C7V8 631 aa34.27■■■■□ 3.08
TNPO2-212ENST00000588491 PABPN1Q86U42 306 aaKnown RBP eCLIP34■■■■□ 3.039e-7■□□□□ 8.3
TNPO2-212ENST00000588491 UNC13AQ9UPW8 1703 aa33.9■■■■□ 3.02
TNPO2-212ENST00000588491 MYO15BQ96JP2 1530 aa33.81■■■■□ 3
TNPO2-212ENST00000588491 BICRAQ9NZM4 1560 aa33.64■■■□□ 2.98
TNPO2-212ENST00000588491 ZCCHC6Q5VYS8 1495 aaKnown RBP33.4■■■□□ 2.94
TNPO2-212ENST00000588491 DCAF1Q9Y4B6 1507 aa33.31■■■□□ 2.92
TNPO2-212ENST00000588491 SHROOM4Q9ULL8 1493 aa33.2■■■□□ 2.91
TNPO2-212ENST00000588491 SCRIBQ14160 1630 aa33.13■■■□□ 2.89
TNPO2-212ENST00000588491 CC2D2AQ9P2K1 1620 aa33■■■□□ 2.87
TNPO2-212ENST00000588491 CECR2Q9BXF3 1484 aa32.95■■■□□ 2.87
TNPO2-212ENST00000588491 EIF4G1Q04637 1599 aaKnown RBP32.87■■■□□ 2.85
TNPO2-212ENST00000588491 DNAJC5Q9H3Z4 198 aa31.78■■■□□ 2.68
TNPO2-212ENST00000588491 NCAPD3P42695 1498 aa31.72■■■□□ 2.67
TNPO2-212ENST00000588491 ERCC6Q03468 1493 aa31.63■■■□□ 2.65
TNPO2-212ENST00000588491 ATAD2BQ9ULI0 1458 aa31.61■■■□□ 2.65
TNPO2-212ENST00000588491 CUX2O14529 1486 aa31.59■■■□□ 2.65
TNPO2-212ENST00000588491 SMARCA2P51531 1590 aa31.56■■■□□ 2.64
TNPO2-212ENST00000588491 SMARCA4P51532 1647 aa31.55■■■□□ 2.64
TNPO2-212ENST00000588491 HMGXB3Q12766 1538 aa31.49■■■□□ 2.63
TNPO2-212ENST00000588491 BAZ1AQ9NRL2 1556 aaPredicted RBP31.37■■■□□ 2.61
TNPO2-212ENST00000588491 BAZ1BQ9UIG0 1483 aaKnown RBP31.34■■■□□ 2.61
TNPO2-212ENST00000588491 NESP48681 1621 aa31.31■■■□□ 2.6
TNPO2-212ENST00000588491 PEG3Q9GZU2 1588 aa31.21■■■□□ 2.59
TNPO2-212ENST00000588491 MROH2BQ7Z745 1585 aa31.09■■■□□ 2.57
TNPO2-212ENST00000588491 LAMC3Q9Y6N6 1575 aa31.09■■■□□ 2.57
TNPO2-212ENST00000588491 THOC2Q8NI27 1593 aaKnown RBP31.05■■■□□ 2.56
TNPO2-212ENST00000588491 KIF21AQ7Z4S6 1674 aa30.94■■■□□ 2.54
TNPO2-212ENST00000588491 PDS5BQ9NTI5 1447 aa30.93■■■□□ 2.54
TNPO2-212ENST00000588491 CADPSQ9ULU8 1353 aa30.78■■■□□ 2.52
TNPO2-212ENST00000588491 WIZO95785 1651 aa30.74■■■□□ 2.51
TNPO2-212ENST00000588491 MRC2Q9UBG0 1479 aa30.67■■■□□ 2.5
TNPO2-212ENST00000588491 WDR62O43379 1518 aa30.57■■■□□ 2.49
TNPO2-212ENST00000588491 CEP164Q9UPV0 1460 aa30.52■■■□□ 2.48
TNPO2-212ENST00000588491 FANCD2Q9BXW9 1451 aa30.44■■■□□ 2.46
TNPO2-212ENST00000588491 TRIM41Q8WV44 630 aa30.39■■■□□ 2.46
TNPO2-212ENST00000588491 CFTRP13569 1480 aa30.37■■■□□ 2.45
TNPO2-212ENST00000588491 RSF1Q96T23 1441 aaPredicted RBP30.36■■■□□ 2.45
TNPO2-212ENST00000588491 TOP2AP11388 1531 aaKnown RBP30.33■■■□□ 2.45
TNPO2-212ENST00000588491 URB2Q14146 1524 aaKnown RBP30.18■■■□□ 2.42
TNPO2-212ENST00000588491 OSCARQ8IYS5 282 aa30.13■■■□□ 2.41
TNPO2-212ENST00000588491 PRDM2Q13029 1718 aa30.11■■■□□ 2.41
TNPO2-212ENST00000588491 CCDC88BA6NC98 1476 aa29.98■■■□□ 2.39
TNPO2-212ENST00000588491 IFT140Q96RY7 1462 aa29.91■■■□□ 2.38
TNPO2-212ENST00000588491 ZNF608Q9ULD9 1512 aaPredicted RBP29.85■■■□□ 2.37
TNPO2-212ENST00000588491 TOPBP1Q92547 1522 aa29.84■■■□□ 2.37
TNPO2-212ENST00000588491 ABCC8Q09428 1581 aa29.78■■■□□ 2.36
TNPO2-212ENST00000588491 RIMBP3CA6NJZ7 1639 aa29.74■■■□□ 2.35
TNPO2-212ENST00000588491 RIMBP3BA6NNM3 1639 aa29.74■■■□□ 2.35
TNPO2-212ENST00000588491 RIMBP3Q9UFD9 1639 aa29.74■■■□□ 2.35
TNPO2-212ENST00000588491 DNMBPQ6XZF7 1577 aa29.73■■■□□ 2.35
TNPO2-212ENST00000588491 EIF4G3O43432 1585 aaKnown RBP29.7■■■□□ 2.35
TNPO2-212ENST00000588491 ARHGEF11O15085 1522 aa29.62■■■□□ 2.33
TNPO2-212ENST00000588491 TARBP1Q13395 1621 aaKnown RBP29.56■■■□□ 2.32
TNPO2-212ENST00000588491 AQRO60306 1485 aaKnown RBP eCLIP29.56■■■□□ 2.325e-9■■■■□ 19.6
TNPO2-212ENST00000588491 CHD1O14646 1710 aa29.54■■■□□ 2.32
TNPO2-212ENST00000588491 POLA1P09884 1462 aaPredicted RBP29.52■■■□□ 2.32
TNPO2-212ENST00000588491 FBLN2P98095 1184 aa29.49■■■□□ 2.31
TNPO2-212ENST00000588491 CYB5RLQ6IPT4 315 aa29.45■■■□□ 2.31
TNPO2-212ENST00000588491 RAD54L2Q9Y4B4 1467 aa29.42■■■□□ 2.3
TNPO2-212ENST00000588491 SOGA1O94964 1423 aa29.39■■■□□ 2.3
TNPO2-212ENST00000588491 TDRD9Q8NDG6 1382 aaKnown RBP29.36■■■□□ 2.29
TNPO2-212ENST00000588491 FGD5Q6ZNL6 1462 aa29.31■■■□□ 2.28
TNPO2-212ENST00000588491 ARAP1Q96P48 1450 aa29.31■■■□□ 2.28
TNPO2-212ENST00000588491 WDR97A6NE52 1622 aa29.29■■■□□ 2.28
TNPO2-212ENST00000588491 SNAPC4Q5SXM2 1469 aa29.28■■■□□ 2.28
TNPO2-212ENST00000588491 TRHP20396 242 aaPredicted RBP29.24■■■□□ 2.27
TNPO2-212ENST00000588491 CUX1P39880 1505 aa29.23■■■□□ 2.27
TNPO2-212ENST00000588491 CHMP7Q8WUX9 453 aaPredicted RBP29.22■■■□□ 2.27
TNPO2-212ENST00000588491 MAGI1Q96QZ7 1491 aaPredicted RBP29.19■■■□□ 2.26
TNPO2-212ENST00000588491 SYNJ1O43426 1573 aa29.18■■■□□ 2.26
TNPO2-212ENST00000588491 GRIN2BQ13224 1484 aa29.17■■■□□ 2.26
TNPO2-212ENST00000588491 CLASP1Q7Z460 1538 aa29.15■■■□□ 2.26
TNPO2-212ENST00000588491 SYNJ2O15056 1496 aa29.1■■■□□ 2.25
TNPO2-212ENST00000588491 PBRM1Q86U86 1689 aa29.06■■■□□ 2.24
TNPO2-212ENST00000588491 GAPVD1Q14C86 1478 aa29.04■■■□□ 2.24
TNPO2-212ENST00000588491 SUPT5HO00267 1087 aaKnown RBP28.96■■■□□ 2.23
TNPO2-212ENST00000588491 ABCA10Q8WWZ4 1543 aa28.95■■■□□ 2.23
TNPO2-212ENST00000588491 ABCA5Q8WWZ7 1642 aa28.93■■■□□ 2.22
TNPO2-212ENST00000588491 WRNQ14191 1432 aaPredicted RBP eCLIP28.82■■■□□ 2.2
TNPO2-212ENST00000588491 GRIN2AQ12879 1464 aa28.78■■■□□ 2.2
TNPO2-212ENST00000588491 ADAMTS12P58397 1594 aa28.75■■■□□ 2.19
TNPO2-212ENST00000588491 BIVM-ERCC5R4GMW8 1640 aa28.72■■■□□ 2.19
TNPO2-212ENST00000588491 TOP2BQ02880 1626 aa28.72■■■□□ 2.19
TNPO2-212ENST00000588491 CEP170Q5SW79 1584 aa28.67■■■□□ 2.18
TNPO2-212ENST00000588491 ERCC6L2Q5T890 1561 aa28.67■■■□□ 2.18
TNPO2-212ENST00000588491 NUP160Q12769 1436 aa28.67■■■□□ 2.18
TNPO2-212ENST00000588491 FHAD1B1AJZ9 1412 aa28.66■■■□□ 2.18
TNPO2-212ENST00000588491 ERICH3Q5RHP9 1530 aa28.6■■■□□ 2.17
TNPO2-212ENST00000588491 AEBP2Q6ZN18 517 aaPredicted RBP28.58■■■□□ 2.17
TNPO2-212ENST00000588491 SHROOM2Q13796 1616 aa28.57■■■□□ 2.16
TNPO2-212ENST00000588491 PRG4Q92954 1404 aaPredicted RBP28.44■■■□□ 2.14
TNPO2-212ENST00000588491 JPH4Q96JJ6 628 aa28.41■■■□□ 2.14
TNPO2-212ENST00000588491 RUSC2Q8N2Y8 1516 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 1021.9 ms