RNA–Protein interactions for RNA: ENST00000588465.5

SLC44A2-208, Transcript of solute carrier family 44 member 2, humanhuman

TSL 1 (best)

Gene SLC44A2, Length 1,487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2-208ENST00000588465 NISCHQ9Y2I1 1504 aa45.83■■■■■ 4.93
SLC44A2-208ENST00000588465 CCDC180Q9P1Z9 1646 aa40.64■■■■■ 4.1
SLC44A2-208ENST00000588465 ABCC9O60706 1549 aa39.6■■■■□ 3.93
SLC44A2-208ENST00000588465 ZCCHC6Q5VYS8 1495 aaKnown RBP38.24■■■■□ 3.71
SLC44A2-208ENST00000588465 DCAF8L2P0C7V8 631 aa38.2■■■■□ 3.71
SLC44A2-208ENST00000588465 NACADO15069 1562 aa38.16■■■■□ 3.7
SLC44A2-208ENST00000588465 RB1CC1Q8TDY2 1594 aa38.15■■■■□ 3.7
SLC44A2-208ENST00000588465 MYO15BQ96JP2 1530 aa37.99■■■■□ 3.67
SLC44A2-208ENST00000588465 DCAF1Q9Y4B6 1507 aa37.91■■■■□ 3.66
SLC44A2-208ENST00000588465 UNC13AQ9UPW8 1703 aa37.31■■■■□ 3.56
SLC44A2-208ENST00000588465 SCRIBQ14160 1630 aa37.14■■■■□ 3.54
SLC44A2-208ENST00000588465 PABPN1Q86U42 306 aaKnown RBP eCLIP37.05■■■■□ 3.52
SLC44A2-208ENST00000588465 BICRAQ9NZM4 1560 aa37.02■■■■□ 3.52
SLC44A2-208ENST00000588465 SHROOM4Q9ULL8 1493 aa36.61■■■■□ 3.45
SLC44A2-208ENST00000588465 DNAJC5BQ9UF47 199 aa36.18■■■■□ 3.38
SLC44A2-208ENST00000588465 EIF4G1Q04637 1599 aaKnown RBP36.02■■■■□ 3.36
SLC44A2-208ENST00000588465 CC2D2AQ9P2K1 1620 aa35.83■■■■□ 3.33
SLC44A2-208ENST00000588465 CECR2Q9BXF3 1484 aa35.71■■■■□ 3.31
SLC44A2-208ENST00000588465 SMARCA4P51532 1647 aa35.53■■■■□ 3.28
SLC44A2-208ENST00000588465 BAZ1AQ9NRL2 1556 aaPredicted RBP35.51■■■■□ 3.27
SLC44A2-208ENST00000588465 MROH2BQ7Z745 1585 aa35.34■■■■□ 3.25
SLC44A2-208ENST00000588465 ATAD2BQ9ULI0 1458 aa35.28■■■■□ 3.24
SLC44A2-208ENST00000588465 SMARCA2P51531 1590 aa35.23■■■■□ 3.23
SLC44A2-208ENST00000588465 NCAPD3P42695 1498 aa35.21■■■■□ 3.23
SLC44A2-208ENST00000588465 PEG3Q9GZU2 1588 aa35.17■■■■□ 3.22
SLC44A2-208ENST00000588465 HMGXB3Q12766 1538 aa35.07■■■■□ 3.2
SLC44A2-208ENST00000588465 RSF1Q96T23 1441 aaPredicted RBP35.01■■■■□ 3.2
SLC44A2-208ENST00000588465 BAZ1BQ9UIG0 1483 aaKnown RBP35■■■■□ 3.19
SLC44A2-208ENST00000588465 WIZO95785 1651 aa34.97■■■■□ 3.19
SLC44A2-208ENST00000588465 TOP2AP11388 1531 aaKnown RBP34.6■■■■□ 3.13
SLC44A2-208ENST00000588465 NESP48681 1621 aa34.35■■■■□ 3.09
SLC44A2-208ENST00000588465 SUPT5HO00267 1087 aaKnown RBP34.27■■■■□ 3.08
SLC44A2-208ENST00000588465 LAMC3Q9Y6N6 1575 aa34.25■■■■□ 3.07
SLC44A2-208ENST00000588465 CADPSQ9ULU8 1353 aa34.2■■■■□ 3.07
SLC44A2-208ENST00000588465 CCDC88BA6NC98 1476 aa34.2■■■■□ 3.07
SLC44A2-208ENST00000588465 ERCC6Q03468 1493 aa34.11■■■■□ 3.05
SLC44A2-208ENST00000588465 CFTRP13569 1480 aa34.06■■■■□ 3.04
SLC44A2-208ENST00000588465 PDS5BQ9NTI5 1447 aa34.01■■■■□ 3.03
SLC44A2-208ENST00000588465 KIF21AQ7Z4S6 1674 aa33.93■■■■□ 3.02
SLC44A2-208ENST00000588465 FANCD2Q9BXW9 1451 aa33.83■■■■□ 3.01
SLC44A2-208ENST00000588465 PRDM2Q13029 1718 aa33.79■■■■□ 3
SLC44A2-208ENST00000588465 THOC2Q8NI27 1593 aaKnown RBP33.77■■■■□ 3
SLC44A2-208ENST00000588465 CEP164Q9UPV0 1460 aa33.76■■■□□ 2.99
SLC44A2-208ENST00000588465 MRC2Q9UBG0 1479 aa33.67■■■□□ 2.98
SLC44A2-208ENST00000588465 CUX2O14529 1486 aa33.65■■■□□ 2.98
SLC44A2-208ENST00000588465 WDR62O43379 1518 aa33.56■■■□□ 2.96
SLC44A2-208ENST00000588465 URB2Q14146 1524 aaKnown RBP33.49■■■□□ 2.95
SLC44A2-208ENST00000588465 TOPBP1Q92547 1522 aa33.31■■■□□ 2.92
SLC44A2-208ENST00000588465 DNMBPQ6XZF7 1577 aa33.28■■■□□ 2.92
SLC44A2-208ENST00000588465 ABCC8Q09428 1581 aa33.27■■■□□ 2.92
SLC44A2-208ENST00000588465 CUX1P39880 1505 aa33.15■■■□□ 2.9
SLC44A2-208ENST00000588465 POLA1P09884 1462 aaPredicted RBP33.05■■■□□ 2.88
SLC44A2-208ENST00000588465 IFT140Q96RY7 1462 aa33.03■■■□□ 2.88
SLC44A2-208ENST00000588465 FGD5Q6ZNL6 1462 aa33■■■□□ 2.87
SLC44A2-208ENST00000588465 WRNQ14191 1432 aaPredicted RBP eCLIP32.99■■■□□ 2.87
SLC44A2-208ENST00000588465 TARBP1Q13395 1621 aaKnown RBP32.93■■■□□ 2.86
SLC44A2-208ENST00000588465 SYNJ1O43426 1573 aa32.93■■■□□ 2.86
SLC44A2-208ENST00000588465 RAD54L2Q9Y4B4 1467 aa32.91■■■□□ 2.86
SLC44A2-208ENST00000588465 ZNF608Q9ULD9 1512 aaPredicted RBP32.9■■■□□ 2.86
SLC44A2-208ENST00000588465 TOP2BQ02880 1626 aa32.9■■■□□ 2.86
SLC44A2-208ENST00000588465 SOGA1O94964 1423 aa32.89■■■□□ 2.86
SLC44A2-208ENST00000588465 BIVM-ERCC5R4GMW8 1640 aa32.89■■■□□ 2.86
SLC44A2-208ENST00000588465 EIF4G3O43432 1585 aaKnown RBP32.78■■■□□ 2.84
SLC44A2-208ENST00000588465 AQRO60306 1485 aaKnown RBP eCLIP32.73■■■□□ 2.832e-6■■■□□ 18.3
SLC44A2-208ENST00000588465 WDR97A6NE52 1622 aa32.71■■■□□ 2.83
SLC44A2-208ENST00000588465 TDRD9Q8NDG6 1382 aaKnown RBP32.7■■■□□ 2.83
SLC44A2-208ENST00000588465 ABCA10Q8WWZ4 1543 aa32.67■■■□□ 2.82
SLC44A2-208ENST00000588465 ABCA5Q8WWZ7 1642 aa32.54■■■□□ 2.8
SLC44A2-208ENST00000588465 GAPVD1Q14C86 1478 aa32.53■■■□□ 2.8
SLC44A2-208ENST00000588465 GRIN2BQ13224 1484 aa32.49■■■□□ 2.79
SLC44A2-208ENST00000588465 PBRM1Q86U86 1689 aa32.45■■■□□ 2.78
SLC44A2-208ENST00000588465 SNAPC4Q5SXM2 1469 aa32.44■■■□□ 2.78
SLC44A2-208ENST00000588465 DNAJC5Q9H3Z4 198 aa32.38■■■□□ 2.77
SLC44A2-208ENST00000588465 MAGI1Q96QZ7 1491 aaPredicted RBP32.38■■■□□ 2.77
SLC44A2-208ENST00000588465 TRIM41Q8WV44 630 aa32.34■■■□□ 2.77
SLC44A2-208ENST00000588465 CHD1O14646 1710 aa32.31■■■□□ 2.76
SLC44A2-208ENST00000588465 FBLN2P98095 1184 aa32.29■■■□□ 2.76
SLC44A2-208ENST00000588465 OSCARQ8IYS5 282 aa32.29■■■□□ 2.76
SLC44A2-208ENST00000588465 ERICH3Q5RHP9 1530 aa32.28■■■□□ 2.76
SLC44A2-208ENST00000588465 KIF27Q86VH2 1401 aa32.27■■■□□ 2.76
SLC44A2-208ENST00000588465 SYNJ2O15056 1496 aa32.26■■■□□ 2.75
SLC44A2-208ENST00000588465 ADAMTS12P58397 1594 aa32.22■■■□□ 2.75
SLC44A2-208ENST00000588465 CHMP7Q8WUX9 453 aaPredicted RBP32.22■■■□□ 2.75
SLC44A2-208ENST00000588465 FHAD1B1AJZ9 1412 aa32.15■■■□□ 2.74
SLC44A2-208ENST00000588465 IGF1RP08069 1367 aa32.13■■■□□ 2.73
SLC44A2-208ENST00000588465 CHIC1Q5VXU3 224 aa32.1■■■□□ 2.73
SLC44A2-208ENST00000588465 RUSC2Q8N2Y8 1516 aa32.09■■■□□ 2.73
SLC44A2-208ENST00000588465 GRIN2AQ12879 1464 aa32.08■■■□□ 2.73
SLC44A2-208ENST00000588465 CUL7Q14999 1698 aa32.02■■■□□ 2.72
SLC44A2-208ENST00000588465 CLASP1Q7Z460 1538 aa31.97■■■□□ 2.71
SLC44A2-208ENST00000588465 NUP160Q12769 1436 aa31.93■■■□□ 2.7
SLC44A2-208ENST00000588465 CARMIL1Q5VZK9 1371 aa31.93■■■□□ 2.7
SLC44A2-208ENST00000588465 CEP170Q5SW79 1584 aa31.92■■■□□ 2.7
SLC44A2-208ENST00000588465 ARHGEF11O15085 1522 aa31.81■■■□□ 2.68
SLC44A2-208ENST00000588465 RIMBP3CA6NJZ7 1639 aa31.78■■■□□ 2.68
SLC44A2-208ENST00000588465 RIMBP3BA6NNM3 1639 aa31.78■■■□□ 2.68
SLC44A2-208ENST00000588465 RIMBP3Q9UFD9 1639 aa31.78■■■□□ 2.68
SLC44A2-208ENST00000588465 EEA1Q15075 1411 aa31.77■■■□□ 2.68
SLC44A2-208ENST00000588465 RAPGEF2Q9Y4G8 1499 aa31.77■■■□□ 2.68
SLC44A2-208ENST00000588465 PRXQ9BXM0 1461 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms