RNA–Protein interactions for RNA: ENST00000588458.1

ABCA8-210, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 2

Gene ABCA8, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-210ENST00000588458 NISCHQ9Y2I1 1504 aa31.94■■■□□ 2.7
ABCA8-210ENST00000588458 ABCC9O60706 1549 aa28.74■■■□□ 2.19
ABCA8-210ENST00000588458 CCDC180Q9P1Z9 1646 aa28.51■■■□□ 2.15
ABCA8-210ENST00000588458 DCAF8L2P0C7V8 631 aa27.26■■□□□ 1.95
ABCA8-210ENST00000588458 RB1CC1Q8TDY2 1594 aa27.25■■□□□ 1.95
ABCA8-210ENST00000588458 NACADO15069 1562 aa27.06■■□□□ 1.92
ABCA8-210ENST00000588458 DNAJC5BQ9UF47 199 aa27.04■■□□□ 1.92
ABCA8-210ENST00000588458 PABPN1Q86U42 306 aaKnown RBP eCLIP26.87■■□□□ 1.89
ABCA8-210ENST00000588458 MYO15BQ96JP2 1530 aa26.65■■□□□ 1.86
ABCA8-210ENST00000588458 UNC13AQ9UPW8 1703 aa26.51■■□□□ 1.83
ABCA8-210ENST00000588458 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
ABCA8-210ENST00000588458 BICRAQ9NZM4 1560 aa26.42■■□□□ 1.82
ABCA8-210ENST00000588458 DCAF1Q9Y4B6 1507 aa26.31■■□□□ 1.8
ABCA8-210ENST00000588458 SCRIBQ14160 1630 aa26.1■■□□□ 1.77
ABCA8-210ENST00000588458 SHROOM4Q9ULL8 1493 aa26.04■■□□□ 1.76
ABCA8-210ENST00000588458 CECR2Q9BXF3 1484 aa25.87■■□□□ 1.73
ABCA8-210ENST00000588458 CC2D2AQ9P2K1 1620 aa25.87■■□□□ 1.73
ABCA8-210ENST00000588458 EIF4G1Q04637 1599 aaKnown RBP25.8■■□□□ 1.72
ABCA8-210ENST00000588458 NCAPD3P42695 1498 aa25.03■■□□□ 1.6
ABCA8-210ENST00000588458 ATAD2BQ9ULI0 1458 aa24.97■■□□□ 1.59
ABCA8-210ENST00000588458 SMARCA4P51532 1647 aa24.86■■□□□ 1.57
ABCA8-210ENST00000588458 SMARCA2P51531 1590 aa24.85■■□□□ 1.57
ABCA8-210ENST00000588458 DNAJC5Q9H3Z4 198 aa24.83■■□□□ 1.57
ABCA8-210ENST00000588458 ERCC6Q03468 1493 aa24.83■■□□□ 1.56
ABCA8-210ENST00000588458 HMGXB3Q12766 1538 aa24.76■■□□□ 1.55
ABCA8-210ENST00000588458 BAZ1AQ9NRL2 1556 aaPredicted RBP24.76■■□□□ 1.55
ABCA8-210ENST00000588458 BAZ1BQ9UIG0 1483 aaKnown RBP24.72■■□□□ 1.55
ABCA8-210ENST00000588458 CUX2O14529 1486 aa24.7■■□□□ 1.54
ABCA8-210ENST00000588458 NESP48681 1621 aa24.66■■□□□ 1.54
ABCA8-210ENST00000588458 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
ABCA8-210ENST00000588458 PEG3Q9GZU2 1588 aa24.58■■□□□ 1.52
ABCA8-210ENST00000588458 LAMC3Q9Y6N6 1575 aa24.41■■□□□ 1.5
ABCA8-210ENST00000588458 PDS5BQ9NTI5 1447 aa24.38■■□□□ 1.49
ABCA8-210ENST00000588458 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.49
ABCA8-210ENST00000588458 WIZO95785 1651 aa24.29■■□□□ 1.48
ABCA8-210ENST00000588458 THOC2Q8NI27 1593 aaKnown RBP24.28■■□□□ 1.48
ABCA8-210ENST00000588458 KIF21AQ7Z4S6 1674 aa24.22■■□□□ 1.47
ABCA8-210ENST00000588458 RSF1Q96T23 1441 aaPredicted RBP24.16■■□□□ 1.46
ABCA8-210ENST00000588458 MRC2Q9UBG0 1479 aa24.11■■□□□ 1.45
ABCA8-210ENST00000588458 FANCD2Q9BXW9 1451 aa24.02■■□□□ 1.44
ABCA8-210ENST00000588458 CEP164Q9UPV0 1460 aa24.02■■□□□ 1.44
ABCA8-210ENST00000588458 CFTRP13569 1480 aa23.99■■□□□ 1.43
ABCA8-210ENST00000588458 WDR62O43379 1518 aa23.99■■□□□ 1.43
ABCA8-210ENST00000588458 TOP2AP11388 1531 aaKnown RBP23.97■■□□□ 1.43
ABCA8-210ENST00000588458 TRIM41Q8WV44 630 aa23.82■■□□□ 1.4
ABCA8-210ENST00000588458 AEBP2Q6ZN18 517 aaPredicted RBP23.8■■□□□ 1.4
ABCA8-210ENST00000588458 CCDC88BA6NC98 1476 aa23.79■■□□□ 1.4
ABCA8-210ENST00000588458 URB2Q14146 1524 aaKnown RBP23.79■■□□□ 1.4
ABCA8-210ENST00000588458 OSCARQ8IYS5 282 aa23.74■■□□□ 1.39
ABCA8-210ENST00000588458 PRDM2Q13029 1718 aa23.56■■□□□ 1.36
ABCA8-210ENST00000588458 IFT140Q96RY7 1462 aa23.55■■□□□ 1.36
ABCA8-210ENST00000588458 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
ABCA8-210ENST00000588458 ZNF608Q9ULD9 1512 aaPredicted RBP23.53■■□□□ 1.36
ABCA8-210ENST00000588458 ABCC8Q09428 1581 aa23.5■■□□□ 1.35
ABCA8-210ENST00000588458 DNMBPQ6XZF7 1577 aa23.4■■□□□ 1.34
ABCA8-210ENST00000588458 AQRO60306 1485 aaKnown RBP eCLIP23.36■■□□□ 1.33
ABCA8-210ENST00000588458 FBLN2P98095 1184 aa23.35■■□□□ 1.33
ABCA8-210ENST00000588458 POLA1P09884 1462 aaPredicted RBP23.3■■□□□ 1.32
ABCA8-210ENST00000588458 EIF4G3O43432 1585 aaKnown RBP23.29■■□□□ 1.32
ABCA8-210ENST00000588458 SOGA1O94964 1423 aa23.28■■□□□ 1.32
ABCA8-210ENST00000588458 SUPT5HO00267 1087 aaKnown RBP23.28■■□□□ 1.32
ABCA8-210ENST00000588458 RAD54L2Q9Y4B4 1467 aa23.27■■□□□ 1.32
ABCA8-210ENST00000588458 TARBP1Q13395 1621 aaKnown RBP23.26■■□□□ 1.31
ABCA8-210ENST00000588458 TDRD9Q8NDG6 1382 aaKnown RBP23.26■■□□□ 1.31
ABCA8-210ENST00000588458 RIMBP3CA6NJZ7 1639 aa23.24■■□□□ 1.31
ABCA8-210ENST00000588458 RIMBP3BA6NNM3 1639 aa23.24■■□□□ 1.31
ABCA8-210ENST00000588458 RIMBP3Q9UFD9 1639 aa23.24■■□□□ 1.31
ABCA8-210ENST00000588458 CYB5RLQ6IPT4 315 aa23.23■■□□□ 1.31
ABCA8-210ENST00000588458 ARHGEF11O15085 1522 aa23.2■■□□□ 1.3
ABCA8-210ENST00000588458 FGD5Q6ZNL6 1462 aa23.16■■□□□ 1.3
ABCA8-210ENST00000588458 CHMP7Q8WUX9 453 aaPredicted RBP23.14■■□□□ 1.29
ABCA8-210ENST00000588458 CUX1P39880 1505 aa23.13■■□□□ 1.29
ABCA8-210ENST00000588458 CHD1O14646 1710 aa23.11■■□□□ 1.29
ABCA8-210ENST00000588458 SNAPC4Q5SXM2 1469 aa23.07■■□□□ 1.28
ABCA8-210ENST00000588458 GRIN2BQ13224 1484 aa23.02■■□□□ 1.28
ABCA8-210ENST00000588458 TRHP20396 242 aaPredicted RBP23■■□□□ 1.27
ABCA8-210ENST00000588458 MAGI1Q96QZ7 1491 aaPredicted RBP22.98■■□□□ 1.27
ABCA8-210ENST00000588458 ARAP1Q96P48 1450 aa22.98■■□□□ 1.27
ABCA8-210ENST00000588458 WDR97A6NE52 1622 aa22.97■■□□□ 1.27
ABCA8-210ENST00000588458 GAPVD1Q14C86 1478 aa22.95■■□□□ 1.26
ABCA8-210ENST00000588458 SYNJ2O15056 1496 aa22.92■■□□□ 1.26
ABCA8-210ENST00000588458 SYNJ1O43426 1573 aa22.89■■□□□ 1.26
ABCA8-210ENST00000588458 ABCA10Q8WWZ4 1543 aa22.88■■□□□ 1.25
ABCA8-210ENST00000588458 CLASP1Q7Z460 1538 aa22.87■■□□□ 1.25
ABCA8-210ENST00000588458 WRNQ14191 1432 aaPredicted RBP eCLIP22.86■■□□□ 1.25
ABCA8-210ENST00000588458 PBRM1Q86U86 1689 aa22.78■■□□□ 1.24
ABCA8-210ENST00000588458 ABCA5Q8WWZ7 1642 aa22.76■■□□□ 1.23
ABCA8-210ENST00000588458 TOP2BQ02880 1626 aa22.71■■□□□ 1.23
ABCA8-210ENST00000588458 GRIN2AQ12879 1464 aa22.7■■□□□ 1.22
ABCA8-210ENST00000588458 FHAD1B1AJZ9 1412 aa22.66■■□□□ 1.22
ABCA8-210ENST00000588458 BIVM-ERCC5R4GMW8 1640 aa22.66■■□□□ 1.22
ABCA8-210ENST00000588458 NUP160Q12769 1436 aa22.62■■□□□ 1.21
ABCA8-210ENST00000588458 ADAMTS12P58397 1594 aa22.61■■□□□ 1.21
ABCA8-210ENST00000588458 ERICH3Q5RHP9 1530 aa22.57■■□□□ 1.2
ABCA8-210ENST00000588458 CEP170Q5SW79 1584 aa22.57■■□□□ 1.2
ABCA8-210ENST00000588458 ERCC6L2Q5T890 1561 aa22.56■■□□□ 1.2
ABCA8-210ENST00000588458 JPH4Q96JJ6 628 aa22.55■■□□□ 1.2
ABCA8-210ENST00000588458 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
ABCA8-210ENST00000588458 SHROOM2Q13796 1616 aa22.42■■□□□ 1.18
ABCA8-210ENST00000588458 IGF1RP08069 1367 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms