RNA–Protein interactions for RNA: ENST00000588151.5

TNPO2-209, Transcript of transportin 2, humanhuman

TSL 3

Gene TNPO2, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-209ENST00000588151 NISCHQ9Y2I1 1504 aa36.46■■■■□ 3.43
TNPO2-209ENST00000588151 CCDC180Q9P1Z9 1646 aa31.76■■■□□ 2.67
TNPO2-209ENST00000588151 ZCCHC6Q5VYS8 1495 aaKnown RBP30.62■■■□□ 2.49
TNPO2-209ENST00000588151 DCAF1Q9Y4B6 1507 aa30.22■■■□□ 2.43
TNPO2-209ENST00000588151 DCAF8L2P0C7V8 631 aa30.1■■■□□ 2.41
TNPO2-209ENST00000588151 ABCC9O60706 1549 aa30.01■■■□□ 2.4
TNPO2-209ENST00000588151 MYO15BQ96JP2 1530 aa29.89■■■□□ 2.38
TNPO2-209ENST00000588151 NACADO15069 1562 aa29.65■■■□□ 2.34
TNPO2-209ENST00000588151 SHROOM4Q9ULL8 1493 aa29.65■■■□□ 2.34
TNPO2-209ENST00000588151 RB1CC1Q8TDY2 1594 aa29.38■■■□□ 2.29
TNPO2-209ENST00000588151 SCRIBQ14160 1630 aa29.14■■■□□ 2.26
TNPO2-209ENST00000588151 SUPT5HO00267 1087 aaKnown RBP28.6■■■□□ 2.17
TNPO2-209ENST00000588151 UNC13AQ9UPW8 1703 aa28.51■■■□□ 2.15
TNPO2-209ENST00000588151 BICRAQ9NZM4 1560 aa28.39■■■□□ 2.14
TNPO2-209ENST00000588151 PABPN1Q86U42 306 aaKnown RBP eCLIP28.33■■■□□ 2.13
TNPO2-209ENST00000588151 RSF1Q96T23 1441 aaPredicted RBP28.3■■■□□ 2.12
TNPO2-209ENST00000588151 CECR2Q9BXF3 1484 aa28.27■■■□□ 2.12
TNPO2-209ENST00000588151 BAZ1AQ9NRL2 1556 aaPredicted RBP28.17■■■□□ 2.1
TNPO2-209ENST00000588151 MROH2BQ7Z745 1585 aa28.11■■■□□ 2.09
TNPO2-209ENST00000588151 SMARCA4P51532 1647 aa27.97■■■□□ 2.07
TNPO2-209ENST00000588151 WIZO95785 1651 aa27.81■■■□□ 2.04
TNPO2-209ENST00000588151 PEG3Q9GZU2 1588 aa27.69■■■□□ 2.02
TNPO2-209ENST00000588151 TOP2AP11388 1531 aaKnown RBP27.66■■■□□ 2.02
TNPO2-209ENST00000588151 SMARCA2P51531 1590 aa27.59■■■□□ 2.01
TNPO2-209ENST00000588151 ATAD2BQ9ULI0 1458 aa27.58■■■□□ 2.01
TNPO2-209ENST00000588151 EIF4G1Q04637 1599 aaKnown RBP27.57■■■□□ 2
TNPO2-209ENST00000588151 BAZ1BQ9UIG0 1483 aaKnown RBP27.43■■□□□ 1.98
TNPO2-209ENST00000588151 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
TNPO2-209ENST00000588151 NCAPD3P42695 1498 aa27.38■■□□□ 1.97
TNPO2-209ENST00000588151 CCDC88BA6NC98 1476 aa27.36■■□□□ 1.97
TNPO2-209ENST00000588151 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
TNPO2-209ENST00000588151 CC2D2AQ9P2K1 1620 aa27.12■■□□□ 1.93
TNPO2-209ENST00000588151 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
TNPO2-209ENST00000588151 CFTRP13569 1480 aa26.75■■□□□ 1.87
TNPO2-209ENST00000588151 CADPSQ9ULU8 1353 aa26.7■■□□□ 1.86
TNPO2-209ENST00000588151 ABCC8Q09428 1581 aa26.67■■□□□ 1.86
TNPO2-209ENST00000588151 WRNQ14191 1432 aaPredicted RBP eCLIP26.65■■□□□ 1.86
TNPO2-209ENST00000588151 PRDM2Q13029 1718 aa26.43■■□□□ 1.82
TNPO2-209ENST00000588151 SYNJ1O43426 1573 aa26.43■■□□□ 1.82
TNPO2-209ENST00000588151 DNAJC5BQ9UF47 199 aa26.43■■□□□ 1.82
TNPO2-209ENST00000588151 LAMC3Q9Y6N6 1575 aa26.41■■□□□ 1.82
TNPO2-209ENST00000588151 FAM9AQ8IZU1 332 aaPredicted RBP26.38■■□□□ 1.81
TNPO2-209ENST00000588151 TOP2BQ02880 1626 aa26.38■■□□□ 1.81
TNPO2-209ENST00000588151 EEA1Q15075 1411 aa26.38■■□□□ 1.81
TNPO2-209ENST00000588151 FANCD2Q9BXW9 1451 aa26.35■■□□□ 1.81
TNPO2-209ENST00000588151 BIVM-ERCC5R4GMW8 1640 aa26.32■■□□□ 1.8
TNPO2-209ENST00000588151 NESP48681 1621 aa26.31■■□□□ 1.8
TNPO2-209ENST00000588151 LOC105371045A0A1W2PR82 267 aa26.3■■□□□ 1.8
TNPO2-209ENST00000588151 CUX1P39880 1505 aa26.29■■□□□ 1.8
TNPO2-209ENST00000588151 PDS5BQ9NTI5 1447 aa26.29■■□□□ 1.8
TNPO2-209ENST00000588151 SOGA1O94964 1423 aa26.26■■□□□ 1.79
TNPO2-209ENST00000588151 CEP164Q9UPV0 1460 aa26.19■■□□□ 1.78
TNPO2-209ENST00000588151 CSRNP3Q8WYN3 585 aa26.18■■□□□ 1.78
TNPO2-209ENST00000588151 RUSC2Q8N2Y8 1516 aa26.1■■□□□ 1.77
TNPO2-209ENST00000588151 DNMBPQ6XZF7 1577 aa26.1■■□□□ 1.77
TNPO2-209ENST00000588151 TOPBP1Q92547 1522 aa26.04■■□□□ 1.76
TNPO2-209ENST00000588151 KIF27Q86VH2 1401 aa26.03■■□□□ 1.76
TNPO2-209ENST00000588151 FGD5Q6ZNL6 1462 aa26.03■■□□□ 1.76
TNPO2-209ENST00000588151 URB2Q14146 1524 aaKnown RBP25.98■■□□□ 1.75
TNPO2-209ENST00000588151 GOLGA3Q08378 1498 aa25.93■■□□□ 1.74
TNPO2-209ENST00000588151 EHMT2Q96KQ7 1210 aa25.93■■□□□ 1.74
TNPO2-209ENST00000588151 KIF21AQ7Z4S6 1674 aa25.91■■□□□ 1.74
TNPO2-209ENST00000588151 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
TNPO2-209ENST00000588151 CUX2O14529 1486 aa25.9■■□□□ 1.74
TNPO2-209ENST00000588151 MRC2Q9UBG0 1479 aa25.9■■□□□ 1.74
TNPO2-209ENST00000588151 KIF21BO75037 1637 aa25.89■■□□□ 1.74
TNPO2-209ENST00000588151 TNIKQ9UKE5 1360 aa25.88■■□□□ 1.73
TNPO2-209ENST00000588151 ABCA10Q8WWZ4 1543 aa25.85■■□□□ 1.73
TNPO2-209ENST00000588151 UBTFP17480 764 aaKnown RBP25.82■■□□□ 1.72
TNPO2-209ENST00000588151 PRXQ9BXM0 1461 aa25.81■■□□□ 1.72
TNPO2-209ENST00000588151 ERCC6Q03468 1493 aa25.8■■□□□ 1.72
TNPO2-209ENST00000588151 RAD54L2Q9Y4B4 1467 aa25.8■■□□□ 1.72
TNPO2-209ENST00000588151 IGF1RP08069 1367 aa25.77■■□□□ 1.72
TNPO2-209ENST00000588151 ERICH3Q5RHP9 1530 aa25.76■■□□□ 1.71
TNPO2-209ENST00000588151 RAPGEF2Q9Y4G8 1499 aa25.72■■□□□ 1.71
TNPO2-209ENST00000588151 WDR62O43379 1518 aa25.72■■□□□ 1.71
TNPO2-209ENST00000588151 CEP162Q5TB80 1403 aa25.67■■□□□ 1.7
TNPO2-209ENST00000588151 CARMIL1Q5VZK9 1371 aa25.65■■□□□ 1.7
TNPO2-209ENST00000588151 WDR97A6NE52 1622 aa25.62■■□□□ 1.69
TNPO2-209ENST00000588151 IFT140Q96RY7 1462 aa25.61■■□□□ 1.69
TNPO2-209ENST00000588151 TARBP1Q13395 1621 aaKnown RBP25.6■■□□□ 1.69
TNPO2-209ENST00000588151 TDRD9Q8NDG6 1382 aaKnown RBP25.59■■□□□ 1.69
TNPO2-209ENST00000588151 GAPVD1Q14C86 1478 aa25.58■■□□□ 1.69
TNPO2-209ENST00000588151 THOC2Q8NI27 1593 aaKnown RBP25.56■■□□□ 1.68
TNPO2-209ENST00000588151 ABCA5Q8WWZ7 1642 aa25.55■■□□□ 1.68
TNPO2-209ENST00000588151 CLIP1P30622 1438 aa25.51■■□□□ 1.67
TNPO2-209ENST00000588151 CUL7Q14999 1698 aa25.51■■□□□ 1.67
TNPO2-209ENST00000588151 GRIN2BQ13224 1484 aa25.42■■□□□ 1.66
TNPO2-209ENST00000588151 AQRO60306 1485 aaKnown RBP eCLIP25.4■■□□□ 1.662e-8■■■■□ 22
TNPO2-209ENST00000588151 FHAD1B1AJZ9 1412 aa25.36■■□□□ 1.65
TNPO2-209ENST00000588151 ZNF608Q9ULD9 1512 aaPredicted RBP25.35■■□□□ 1.65
TNPO2-209ENST00000588151 RANGAP1P46060 587 aaPredicted RBP25.29■■□□□ 1.64
TNPO2-209ENST00000588151 PBRM1Q86U86 1689 aa25.29■■□□□ 1.64
TNPO2-209ENST00000588151 VPS8Q8N3P4 1428 aa25.29■■□□□ 1.64
TNPO2-209ENST00000588151 EIF4G3O43432 1585 aaKnown RBP25.24■■□□□ 1.63
TNPO2-209ENST00000588151 ADAMTS12P58397 1594 aa25.24■■□□□ 1.63
TNPO2-209ENST00000588151 TRIM26Q12899 539 aaPredicted RBP25.23■■□□□ 1.63
TNPO2-209ENST00000588151 ARAP1Q96P48 1450 aa25.2■■□□□ 1.62
TNPO2-209ENST00000588151 ARHGAP35Q9NRY4 1499 aa25.2■■□□□ 1.62
TNPO2-209ENST00000588151 MAGI1Q96QZ7 1491 aaPredicted RBP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms