RNA–Protein interactions for RNA: ENST00000587873.5

C18orf21-204, Transcript of chromosome 18 open reading frame 21, humanhuman

TSL 1 (best)

Gene C18orf21, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C18orf21-204ENST00000587873 NISCHQ9Y2I1 1504 aa28.4■■■□□ 2.14
C18orf21-204ENST00000587873 ABCC9O60706 1549 aa25.9■■□□□ 1.74
C18orf21-204ENST00000587873 CCDC180Q9P1Z9 1646 aa25.63■■□□□ 1.69
C18orf21-204ENST00000587873 DNAJC5BQ9UF47 199 aa24.57■■□□□ 1.52
C18orf21-204ENST00000587873 RB1CC1Q8TDY2 1594 aa24.53■■□□□ 1.52
C18orf21-204ENST00000587873 NACADO15069 1562 aa24.29■■□□□ 1.48
C18orf21-204ENST00000587873 DCAF8L2P0C7V8 631 aa24.08■■□□□ 1.45
C18orf21-204ENST00000587873 PABPN1Q86U42 306 aaKnown RBP eCLIP24.06■■□□□ 1.44
C18orf21-204ENST00000587873 UNC13AQ9UPW8 1703 aa24.01■■□□□ 1.43
C18orf21-204ENST00000587873 MYO15BQ96JP2 1530 aa23.87■■□□□ 1.41
C18orf21-204ENST00000587873 BICRAQ9NZM4 1560 aa23.83■■□□□ 1.41
C18orf21-204ENST00000587873 ZCCHC6Q5VYS8 1495 aaKnown RBP23.49■■□□□ 1.35
C18orf21-204ENST00000587873 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
C18orf21-204ENST00000587873 DCAF1Q9Y4B6 1507 aa23.45■■□□□ 1.34
C18orf21-204ENST00000587873 CC2D2AQ9P2K1 1620 aa23.4■■□□□ 1.34
C18orf21-204ENST00000587873 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
C18orf21-204ENST00000587873 SCRIBQ14160 1630 aa23.32■■□□□ 1.32
C18orf21-204ENST00000587873 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
C18orf21-204ENST00000587873 DNAJC5Q9H3Z4 198 aa22.78■■□□□ 1.24
C18orf21-204ENST00000587873 CUX2O14529 1486 aa22.46■■□□□ 1.19
C18orf21-204ENST00000587873 NCAPD3P42695 1498 aa22.43■■□□□ 1.18
C18orf21-204ENST00000587873 ERCC6Q03468 1493 aa22.39■■□□□ 1.17
C18orf21-204ENST00000587873 ATAD2BQ9ULI0 1458 aa22.32■■□□□ 1.16
C18orf21-204ENST00000587873 SMARCA2P51531 1590 aa22.25■■□□□ 1.15
C18orf21-204ENST00000587873 HMGXB3Q12766 1538 aa22.24■■□□□ 1.15
C18orf21-204ENST00000587873 SMARCA4P51532 1647 aa22.23■■□□□ 1.15
C18orf21-204ENST00000587873 NESP48681 1621 aa22.17■■□□□ 1.14
C18orf21-204ENST00000587873 BAZ1BQ9UIG0 1483 aaKnown RBP22.09■■□□□ 1.13
C18orf21-204ENST00000587873 BAZ1AQ9NRL2 1556 aaPredicted RBP22.07■■□□□ 1.12
C18orf21-204ENST00000587873 THOC2Q8NI27 1593 aaKnown RBP22.02■■□□□ 1.12
C18orf21-204ENST00000587873 PEG3Q9GZU2 1588 aa22.02■■□□□ 1.12
C18orf21-204ENST00000587873 LAMC3Q9Y6N6 1575 aa21.97■■□□□ 1.11
C18orf21-204ENST00000587873 KIF21AQ7Z4S6 1674 aa21.89■■□□□ 1.1
C18orf21-204ENST00000587873 MROH2BQ7Z745 1585 aa21.88■■□□□ 1.09
C18orf21-204ENST00000587873 PDS5BQ9NTI5 1447 aa21.85■■□□□ 1.09
C18orf21-204ENST00000587873 CADPSQ9ULU8 1353 aa21.73■■□□□ 1.07
C18orf21-204ENST00000587873 MRC2Q9UBG0 1479 aa21.68■■□□□ 1.06
C18orf21-204ENST00000587873 WDR62O43379 1518 aa21.65■■□□□ 1.06
C18orf21-204ENST00000587873 TRIM41Q8WV44 630 aa21.64■■□□□ 1.05
C18orf21-204ENST00000587873 WIZO95785 1651 aa21.61■■□□□ 1.05
C18orf21-204ENST00000587873 CEP164Q9UPV0 1460 aa21.53■■□□□ 1.04
C18orf21-204ENST00000587873 FANCD2Q9BXW9 1451 aa21.48■■□□□ 1.03
C18orf21-204ENST00000587873 CFTRP13569 1480 aa21.43■■□□□ 1.02
C18orf21-204ENST00000587873 OSCARQ8IYS5 282 aa21.37■■□□□ 1.01
C18orf21-204ENST00000587873 URB2Q14146 1524 aaKnown RBP21.33■■□□□ 1
C18orf21-204ENST00000587873 RSF1Q96T23 1441 aaPredicted RBP21.32■■□□□ 1
C18orf21-204ENST00000587873 TOP2AP11388 1531 aaKnown RBP21.31■■□□□ 1
C18orf21-204ENST00000587873 PRDM2Q13029 1718 aa21.21■□□□□ 0.99
C18orf21-204ENST00000587873 RIMBP3CA6NJZ7 1639 aa21.14■□□□□ 0.97
C18orf21-204ENST00000587873 RIMBP3BA6NNM3 1639 aa21.14■□□□□ 0.97
C18orf21-204ENST00000587873 RIMBP3Q9UFD9 1639 aa21.14■□□□□ 0.97
C18orf21-204ENST00000587873 ZNF608Q9ULD9 1512 aaPredicted RBP21.12■□□□□ 0.97
C18orf21-204ENST00000587873 IFT140Q96RY7 1462 aa21.12■□□□□ 0.97
C18orf21-204ENST00000587873 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
C18orf21-204ENST00000587873 TOPBP1Q92547 1522 aa21.05■□□□□ 0.96
C18orf21-204ENST00000587873 ARHGEF11O15085 1522 aa21.04■□□□□ 0.96
C18orf21-204ENST00000587873 EIF4G3O43432 1585 aaKnown RBP20.99■□□□□ 0.95
C18orf21-204ENST00000587873 ABCC8Q09428 1581 aa20.97■□□□□ 0.95
C18orf21-204ENST00000587873 DNMBPQ6XZF7 1577 aa20.94■□□□□ 0.94
C18orf21-204ENST00000587873 CHD1O14646 1710 aa20.9■□□□□ 0.94
C18orf21-204ENST00000587873 CYB5RLQ6IPT4 315 aa20.89■□□□□ 0.93
C18orf21-204ENST00000587873 TARBP1Q13395 1621 aaKnown RBP20.89■□□□□ 0.93
C18orf21-204ENST00000587873 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.93
C18orf21-204ENST00000587873 POLA1P09884 1462 aaPredicted RBP20.82■□□□□ 0.92
C18orf21-204ENST00000587873 ARAP1Q96P48 1450 aa20.81■□□□□ 0.92
C18orf21-204ENST00000587873 FBLN2P98095 1184 aa20.8■□□□□ 0.92
C18orf21-204ENST00000587873 TRHP20396 242 aaPredicted RBP20.75■□□□□ 0.91
C18orf21-204ENST00000587873 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
C18orf21-204ENST00000587873 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
C18orf21-204ENST00000587873 SOGA1O94964 1423 aa20.7■□□□□ 0.9
C18orf21-204ENST00000587873 SNAPC4Q5SXM2 1469 aa20.66■□□□□ 0.9
C18orf21-204ENST00000587873 WDR97A6NE52 1622 aa20.65■□□□□ 0.9
C18orf21-204ENST00000587873 CLASP1Q7Z460 1538 aa20.64■□□□□ 0.9
C18orf21-204ENST00000587873 FGD5Q6ZNL6 1462 aa20.64■□□□□ 0.89
C18orf21-204ENST00000587873 SYNJ1O43426 1573 aa20.6■□□□□ 0.89
C18orf21-204ENST00000587873 CHMP7Q8WUX9 453 aaPredicted RBP20.6■□□□□ 0.89
C18orf21-204ENST00000587873 MAGI1Q96QZ7 1491 aaPredicted RBP20.6■□□□□ 0.89
C18orf21-204ENST00000587873 CUX1P39880 1505 aa20.58■□□□□ 0.88
C18orf21-204ENST00000587873 GRIN2BQ13224 1484 aa20.56■□□□□ 0.88
C18orf21-204ENST00000587873 SYNJ2O15056 1496 aa20.54■□□□□ 0.88
C18orf21-204ENST00000587873 PBRM1Q86U86 1689 aa20.48■□□□□ 0.87
C18orf21-204ENST00000587873 GAPVD1Q14C86 1478 aa20.45■□□□□ 0.86
C18orf21-204ENST00000587873 AEBP2Q6ZN18 517 aaPredicted RBP20.4■□□□□ 0.86
C18orf21-204ENST00000587873 ABCA10Q8WWZ4 1543 aa20.4■□□□□ 0.86
C18orf21-204ENST00000587873 ABCA5Q8WWZ7 1642 aa20.39■□□□□ 0.86
C18orf21-204ENST00000587873 GRIN2AQ12879 1464 aa20.3■□□□□ 0.84
C18orf21-204ENST00000587873 ERCC6L2Q5T890 1561 aa20.29■□□□□ 0.84
C18orf21-204ENST00000587873 NUP160Q12769 1436 aa20.26■□□□□ 0.83
C18orf21-204ENST00000587873 ADAMTS12P58397 1594 aa20.25■□□□□ 0.83
C18orf21-204ENST00000587873 CEP170Q5SW79 1584 aa20.25■□□□□ 0.83
C18orf21-204ENST00000587873 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.83
C18orf21-204ENST00000587873 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
C18orf21-204ENST00000587873 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
C18orf21-204ENST00000587873 TOP2BQ02880 1626 aa20.17■□□□□ 0.82
C18orf21-204ENST00000587873 BIVM-ERCC5R4GMW8 1640 aa20.17■□□□□ 0.82
C18orf21-204ENST00000587873 SUPT5HO00267 1087 aaKnown RBP20.15■□□□□ 0.82
C18orf21-204ENST00000587873 ERICH3Q5RHP9 1530 aa20.13■□□□□ 0.81
C18orf21-204ENST00000587873 KIF13AQ9H1H9 1805 aa20.11■□□□□ 0.81
C18orf21-204ENST00000587873 PRG4Q92954 1404 aaPredicted RBP20.07■□□□□ 0.8
C18orf21-204ENST00000587873 JPH4Q96JJ6 628 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms