RNA–Protein interactions for RNA: ENST00000587663.1

ACTBP9-201, Transcript of actin, beta pseudogene 9, humanhuman

BASIC

Gene ACTBP9, Length 1,099 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP9-201ENST00000587663 NISCHQ9Y2I1 1504 aa31.54■■■□□ 2.64
ACTBP9-201ENST00000587663 ABCC9O60706 1549 aa28.77■■■□□ 2.2
ACTBP9-201ENST00000587663 CCDC180Q9P1Z9 1646 aa28.22■■■□□ 2.11
ACTBP9-201ENST00000587663 DNAJC5BQ9UF47 199 aa27.45■■□□□ 1.98
ACTBP9-201ENST00000587663 RB1CC1Q8TDY2 1594 aa27.14■■□□□ 1.93
ACTBP9-201ENST00000587663 DCAF8L2P0C7V8 631 aa27.04■■□□□ 1.92
ACTBP9-201ENST00000587663 NACADO15069 1562 aa26.9■■□□□ 1.9
ACTBP9-201ENST00000587663 PABPN1Q86U42 306 aaKnown RBP eCLIP26.9■■□□□ 1.9
ACTBP9-201ENST00000587663 MYO15BQ96JP2 1530 aa26.44■■□□□ 1.82
ACTBP9-201ENST00000587663 UNC13AQ9UPW8 1703 aa26.38■■□□□ 1.81
ACTBP9-201ENST00000587663 BICRAQ9NZM4 1560 aa26.37■■□□□ 1.81
ACTBP9-201ENST00000587663 ZCCHC6Q5VYS8 1495 aaKnown RBP26.02■■□□□ 1.76
ACTBP9-201ENST00000587663 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
ACTBP9-201ENST00000587663 CECR2Q9BXF3 1484 aa25.94■■□□□ 1.74
ACTBP9-201ENST00000587663 SHROOM4Q9ULL8 1493 aa25.92■■□□□ 1.74
ACTBP9-201ENST00000587663 CC2D2AQ9P2K1 1620 aa25.88■■□□□ 1.73
ACTBP9-201ENST00000587663 SCRIBQ14160 1630 aa25.81■■□□□ 1.72
ACTBP9-201ENST00000587663 EIF4G1Q04637 1599 aaKnown RBP25.75■■□□□ 1.71
ACTBP9-201ENST00000587663 DNAJC5Q9H3Z4 198 aa25.4■■□□□ 1.66
ACTBP9-201ENST00000587663 NCAPD3P42695 1498 aa24.95■■□□□ 1.58
ACTBP9-201ENST00000587663 CUX2O14529 1486 aa24.85■■□□□ 1.57
ACTBP9-201ENST00000587663 ERCC6Q03468 1493 aa24.83■■□□□ 1.57
ACTBP9-201ENST00000587663 ATAD2BQ9ULI0 1458 aa24.81■■□□□ 1.56
ACTBP9-201ENST00000587663 NESP48681 1621 aa24.63■■□□□ 1.53
ACTBP9-201ENST00000587663 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
ACTBP9-201ENST00000587663 SMARCA4P51532 1647 aa24.58■■□□□ 1.53
ACTBP9-201ENST00000587663 HMGXB3Q12766 1538 aa24.58■■□□□ 1.53
ACTBP9-201ENST00000587663 BAZ1BQ9UIG0 1483 aaKnown RBP24.51■■□□□ 1.51
ACTBP9-201ENST00000587663 BAZ1AQ9NRL2 1556 aaPredicted RBP24.46■■□□□ 1.51
ACTBP9-201ENST00000587663 PEG3Q9GZU2 1588 aa24.34■■□□□ 1.49
ACTBP9-201ENST00000587663 MROH2BQ7Z745 1585 aa24.32■■□□□ 1.48
ACTBP9-201ENST00000587663 LAMC3Q9Y6N6 1575 aa24.3■■□□□ 1.48
ACTBP9-201ENST00000587663 PDS5BQ9NTI5 1447 aa24.3■■□□□ 1.48
ACTBP9-201ENST00000587663 THOC2Q8NI27 1593 aaKnown RBP24.26■■□□□ 1.47
ACTBP9-201ENST00000587663 CADPSQ9ULU8 1353 aa24.22■■□□□ 1.47
ACTBP9-201ENST00000587663 TRIM41Q8WV44 630 aa24.15■■□□□ 1.46
ACTBP9-201ENST00000587663 KIF21AQ7Z4S6 1674 aa24.11■■□□□ 1.45
ACTBP9-201ENST00000587663 MRC2Q9UBG0 1479 aa24.03■■□□□ 1.44
ACTBP9-201ENST00000587663 WIZO95785 1651 aa23.95■■□□□ 1.42
ACTBP9-201ENST00000587663 WDR62O43379 1518 aa23.93■■□□□ 1.42
ACTBP9-201ENST00000587663 OSCARQ8IYS5 282 aa23.89■■□□□ 1.41
ACTBP9-201ENST00000587663 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
ACTBP9-201ENST00000587663 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
ACTBP9-201ENST00000587663 CFTRP13569 1480 aa23.81■■□□□ 1.4
ACTBP9-201ENST00000587663 RSF1Q96T23 1441 aaPredicted RBP23.77■■□□□ 1.4
ACTBP9-201ENST00000587663 URB2Q14146 1524 aaKnown RBP23.67■■□□□ 1.38
ACTBP9-201ENST00000587663 TOP2AP11388 1531 aaKnown RBP23.6■■□□□ 1.37
ACTBP9-201ENST00000587663 SUPT5HO00267 1087 aaKnown RBP23.55■■□□□ 1.36
ACTBP9-201ENST00000587663 CCDC88BA6NC98 1476 aa23.48■■□□□ 1.35
ACTBP9-201ENST00000587663 ZNF608Q9ULD9 1512 aaPredicted RBP23.46■■□□□ 1.35
ACTBP9-201ENST00000587663 IFT140Q96RY7 1462 aa23.44■■□□□ 1.34
ACTBP9-201ENST00000587663 CYB5RLQ6IPT4 315 aa23.37■■□□□ 1.33
ACTBP9-201ENST00000587663 TOPBP1Q92547 1522 aa23.36■■□□□ 1.33
ACTBP9-201ENST00000587663 RIMBP3CA6NJZ7 1639 aa23.34■■□□□ 1.33
ACTBP9-201ENST00000587663 RIMBP3BA6NNM3 1639 aa23.34■■□□□ 1.33
ACTBP9-201ENST00000587663 RIMBP3Q9UFD9 1639 aa23.34■■□□□ 1.33
ACTBP9-201ENST00000587663 ABCC8Q09428 1581 aa23.3■■□□□ 1.32
ACTBP9-201ENST00000587663 ARHGEF11O15085 1522 aa23.29■■□□□ 1.32
ACTBP9-201ENST00000587663 FBLN2P98095 1184 aa23.27■■□□□ 1.32
ACTBP9-201ENST00000587663 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.32
ACTBP9-201ENST00000587663 PRDM2Q13029 1718 aa23.23■■□□□ 1.31
ACTBP9-201ENST00000587663 TRHP20396 242 aaPredicted RBP23.19■■□□□ 1.3
ACTBP9-201ENST00000587663 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
ACTBP9-201ENST00000587663 EIF4G3O43432 1585 aaKnown RBP23.15■■□□□ 1.3
ACTBP9-201ENST00000587663 TDRD9Q8NDG6 1382 aaKnown RBP23.12■■□□□ 1.29
ACTBP9-201ENST00000587663 TARBP1Q13395 1621 aaKnown RBP23.11■■□□□ 1.29
ACTBP9-201ENST00000587663 SOGA1O94964 1423 aa23.1■■□□□ 1.29
ACTBP9-201ENST00000587663 POLA1P09884 1462 aaPredicted RBP23.1■■□□□ 1.29
ACTBP9-201ENST00000587663 RAD54L2Q9Y4B4 1467 aa23.09■■□□□ 1.29
ACTBP9-201ENST00000587663 ARAP1Q96P48 1450 aa23.05■■□□□ 1.28
ACTBP9-201ENST00000587663 CHMP7Q8WUX9 453 aaPredicted RBP23.04■■□□□ 1.28
ACTBP9-201ENST00000587663 CHD1O14646 1710 aa23■■□□□ 1.27
ACTBP9-201ENST00000587663 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
ACTBP9-201ENST00000587663 FGD5Q6ZNL6 1462 aa22.91■■□□□ 1.26
ACTBP9-201ENST00000587663 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
ACTBP9-201ENST00000587663 CUX1P39880 1505 aa22.83■■□□□ 1.25
ACTBP9-201ENST00000587663 MAGI1Q96QZ7 1491 aaPredicted RBP22.83■■□□□ 1.25
ACTBP9-201ENST00000587663 CLASP1Q7Z460 1538 aa22.82■■□□□ 1.24
ACTBP9-201ENST00000587663 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
ACTBP9-201ENST00000587663 SYNJ1O43426 1573 aa22.78■■□□□ 1.24
ACTBP9-201ENST00000587663 WDR97A6NE52 1622 aa22.78■■□□□ 1.24
ACTBP9-201ENST00000587663 GAPVD1Q14C86 1478 aa22.74■■□□□ 1.23
ACTBP9-201ENST00000587663 AEBP2Q6ZN18 517 aaPredicted RBP22.72■■□□□ 1.23
ACTBP9-201ENST00000587663 ABCA10Q8WWZ4 1543 aa22.63■■□□□ 1.21
ACTBP9-201ENST00000587663 WRNQ14191 1432 aaPredicted RBP eCLIP22.56■■□□□ 1.2
ACTBP9-201ENST00000587663 PBRM1Q86U86 1689 aa22.53■■□□□ 1.2
ACTBP9-201ENST00000587663 GRIN2AQ12879 1464 aa22.53■■□□□ 1.2
ACTBP9-201ENST00000587663 ABCA5Q8WWZ7 1642 aa22.51■■□□□ 1.19
ACTBP9-201ENST00000587663 ERCC6L2Q5T890 1561 aa22.5■■□□□ 1.19
ACTBP9-201ENST00000587663 NUP160Q12769 1436 aa22.48■■□□□ 1.19
ACTBP9-201ENST00000587663 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
ACTBP9-201ENST00000587663 FHAD1B1AJZ9 1412 aa22.45■■□□□ 1.18
ACTBP9-201ENST00000587663 JPH4Q96JJ6 628 aa22.44■■□□□ 1.18
ACTBP9-201ENST00000587663 CEP170Q5SW79 1584 aa22.42■■□□□ 1.18
ACTBP9-201ENST00000587663 ADAMTS12P58397 1594 aa22.37■■□□□ 1.17
ACTBP9-201ENST00000587663 PRG4Q92954 1404 aaPredicted RBP22.36■■□□□ 1.17
ACTBP9-201ENST00000587663 TOP2BQ02880 1626 aa22.33■■□□□ 1.17
ACTBP9-201ENST00000587663 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
ACTBP9-201ENST00000587663 NPM1P06748 294 aaKnown RBP eCLIP22.3■■□□□ 1.16
ACTBP9-201ENST00000587663 SHROOM2Q13796 1616 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms