RNA–Protein interactions for RNA: ENST00000587633.1

TRMT1-209, Transcript of tRNA methyltransferase 1, humanhuman

TSL 3

Gene TRMT1, Length 648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-209ENST00000587633 NISCHQ9Y2I1 1504 aa44.73■■■■■ 4.75
TRMT1-209ENST00000587633 ABCC9O60706 1549 aa40.49■■■■■ 4.07
TRMT1-209ENST00000587633 CCDC180Q9P1Z9 1646 aa40.2■■■■■ 4.03
TRMT1-209ENST00000587633 RB1CC1Q8TDY2 1594 aa38.44■■■■□ 3.74
TRMT1-209ENST00000587633 DNAJC5BQ9UF47 199 aa38.29■■■■□ 3.72
TRMT1-209ENST00000587633 NACADO15069 1562 aa38.14■■■■□ 3.7
TRMT1-209ENST00000587633 DCAF8L2P0C7V8 631 aa37.94■■■■□ 3.66
TRMT1-209ENST00000587633 PABPN1Q86U42 306 aaKnown RBP eCLIP37.71■■■■□ 3.632e-9■□□□□ 11.1
TRMT1-209ENST00000587633 MYO15BQ96JP2 1530 aa37.56■■■■□ 3.6
TRMT1-209ENST00000587633 UNC13AQ9UPW8 1703 aa37.46■■■■□ 3.59
TRMT1-209ENST00000587633 BICRAQ9NZM4 1560 aa37.29■■■■□ 3.56
TRMT1-209ENST00000587633 ZCCHC6Q5VYS8 1495 aaKnown RBP36.98■■■■□ 3.51
TRMT1-209ENST00000587633 DCAF1Q9Y4B6 1507 aa36.95■■■■□ 3.51
TRMT1-209ENST00000587633 SHROOM4Q9ULL8 1493 aa36.84■■■■□ 3.49
TRMT1-209ENST00000587633 SCRIBQ14160 1630 aa36.58■■■■□ 3.45
TRMT1-209ENST00000587633 CC2D2AQ9P2K1 1620 aa36.56■■■■□ 3.44
TRMT1-209ENST00000587633 CECR2Q9BXF3 1484 aa36.54■■■■□ 3.44
TRMT1-209ENST00000587633 EIF4G1Q04637 1599 aaKnown RBP36.42■■■■□ 3.42
TRMT1-209ENST00000587633 DNAJC5Q9H3Z4 198 aa35.42■■■■□ 3.26
TRMT1-209ENST00000587633 NCAPD3P42695 1498 aa35.25■■■■□ 3.23
TRMT1-209ENST00000587633 ATAD2BQ9ULI0 1458 aa35.06■■■■□ 3.2
TRMT1-209ENST00000587633 CUX2O14529 1486 aa35.05■■■■□ 3.2
TRMT1-209ENST00000587633 ERCC6Q03468 1493 aa35■■■■□ 3.19
TRMT1-209ENST00000587633 SMARCA2P51531 1590 aa34.95■■■■□ 3.18
TRMT1-209ENST00000587633 SMARCA4P51532 1647 aa34.91■■■■□ 3.18
TRMT1-209ENST00000587633 HMGXB3Q12766 1538 aa34.9■■■■□ 3.18
TRMT1-209ENST00000587633 BAZ1AQ9NRL2 1556 aaPredicted RBP34.74■■■■□ 3.15
TRMT1-209ENST00000587633 BAZ1BQ9UIG0 1483 aaKnown RBP34.7■■■■□ 3.15
TRMT1-209ENST00000587633 NESP48681 1621 aa34.7■■■■□ 3.14
TRMT1-209ENST00000587633 PEG3Q9GZU2 1588 aa34.61■■■■□ 3.13
TRMT1-209ENST00000587633 MROH2BQ7Z745 1585 aa34.44■■■■□ 3.1
TRMT1-209ENST00000587633 LAMC3Q9Y6N6 1575 aa34.44■■■■□ 3.1
TRMT1-209ENST00000587633 THOC2Q8NI27 1593 aaKnown RBP34.36■■■■□ 3.09
TRMT1-209ENST00000587633 PDS5BQ9NTI5 1447 aa34.31■■■■□ 3.08
TRMT1-209ENST00000587633 KIF21AQ7Z4S6 1674 aa34.18■■■■□ 3.06
TRMT1-209ENST00000587633 CADPSQ9ULU8 1353 aa34.17■■■■□ 3.06
TRMT1-209ENST00000587633 WIZO95785 1651 aa33.97■■■■□ 3.03
TRMT1-209ENST00000587633 MRC2Q9UBG0 1479 aa33.97■■■■□ 3.03
TRMT1-209ENST00000587633 WDR62O43379 1518 aa33.88■■■■□ 3.01
TRMT1-209ENST00000587633 CEP164Q9UPV0 1460 aa33.78■■■■□ 3
TRMT1-209ENST00000587633 FANCD2Q9BXW9 1451 aa33.73■■■□□ 2.99
TRMT1-209ENST00000587633 CFTRP13569 1480 aa33.69■■■□□ 2.98
TRMT1-209ENST00000587633 TRIM41Q8WV44 630 aa33.68■■■□□ 2.98
TRMT1-209ENST00000587633 RSF1Q96T23 1441 aaPredicted RBP33.67■■■□□ 2.98
TRMT1-209ENST00000587633 TOP2AP11388 1531 aaKnown RBP33.56■■■□□ 2.96
TRMT1-209ENST00000587633 OSCARQ8IYS5 282 aa33.5■■■□□ 2.95
TRMT1-209ENST00000587633 URB2Q14146 1524 aaKnown RBP33.45■■■□□ 2.95
TRMT1-209ENST00000587633 CCDC88BA6NC98 1476 aa33.22■■■□□ 2.91
TRMT1-209ENST00000587633 PRDM2Q13029 1718 aa33.2■■■□□ 2.91
TRMT1-209ENST00000587633 IFT140Q96RY7 1462 aa33.14■■■□□ 2.9
TRMT1-209ENST00000587633 ZNF608Q9ULD9 1512 aaPredicted RBP33.07■■■□□ 2.89
TRMT1-209ENST00000587633 TOPBP1Q92547 1522 aa33.05■■■□□ 2.88
TRMT1-209ENST00000587633 ABCC8Q09428 1581 aa33.03■■■□□ 2.88
TRMT1-209ENST00000587633 RIMBP3CA6NJZ7 1639 aa32.94■■■□□ 2.86
TRMT1-209ENST00000587633 RIMBP3BA6NNM3 1639 aa32.94■■■□□ 2.86
TRMT1-209ENST00000587633 RIMBP3Q9UFD9 1639 aa32.94■■■□□ 2.86
TRMT1-209ENST00000587633 DNMBPQ6XZF7 1577 aa32.88■■■□□ 2.85
TRMT1-209ENST00000587633 EIF4G3O43432 1585 aaKnown RBP32.83■■■□□ 2.85
TRMT1-209ENST00000587633 ARHGEF11O15085 1522 aa32.83■■■□□ 2.85
TRMT1-209ENST00000587633 AQRO60306 1485 aaKnown RBP eCLIP32.79■■■□□ 2.843e-6■■□□□ 13.8
TRMT1-209ENST00000587633 TARBP1Q13395 1621 aaKnown RBP32.75■■■□□ 2.83
TRMT1-209ENST00000587633 POLA1P09884 1462 aaPredicted RBP32.7■■■□□ 2.83
TRMT1-209ENST00000587633 CYB5RLQ6IPT4 315 aa32.7■■■□□ 2.83
TRMT1-209ENST00000587633 FBLN2P98095 1184 aa32.66■■■□□ 2.82
TRMT1-209ENST00000587633 CHD1O14646 1710 aa32.62■■■□□ 2.81
TRMT1-209ENST00000587633 SOGA1O94964 1423 aa32.6■■■□□ 2.81
TRMT1-209ENST00000587633 RAD54L2Q9Y4B4 1467 aa32.58■■■□□ 2.81
TRMT1-209ENST00000587633 TDRD9Q8NDG6 1382 aaKnown RBP32.56■■■□□ 2.8
TRMT1-209ENST00000587633 ARAP1Q96P48 1450 aa32.48■■■□□ 2.79
TRMT1-209ENST00000587633 FGD5Q6ZNL6 1462 aa32.44■■■□□ 2.78
TRMT1-209ENST00000587633 WDR97A6NE52 1622 aa32.43■■■□□ 2.78
TRMT1-209ENST00000587633 TRHP20396 242 aaPredicted RBP32.41■■■□□ 2.78
TRMT1-209ENST00000587633 CHMP7Q8WUX9 453 aaPredicted RBP32.4■■■□□ 2.78
TRMT1-209ENST00000587633 SNAPC4Q5SXM2 1469 aa32.4■■■□□ 2.78
TRMT1-209ENST00000587633 CUX1P39880 1505 aa32.36■■■□□ 2.77
TRMT1-209ENST00000587633 MAGI1Q96QZ7 1491 aaPredicted RBP32.35■■■□□ 2.77
TRMT1-209ENST00000587633 GRIN2BQ13224 1484 aa32.32■■■□□ 2.76
TRMT1-209ENST00000587633 CLASP1Q7Z460 1538 aa32.3■■■□□ 2.76
TRMT1-209ENST00000587633 SYNJ1O43426 1573 aa32.27■■■□□ 2.76
TRMT1-209ENST00000587633 SYNJ2O15056 1496 aa32.24■■■□□ 2.75
TRMT1-209ENST00000587633 GAPVD1Q14C86 1478 aa32.17■■■□□ 2.74
TRMT1-209ENST00000587633 ABCA10Q8WWZ4 1543 aa32.09■■■□□ 2.73
TRMT1-209ENST00000587633 PBRM1Q86U86 1689 aa32.06■■■□□ 2.72
TRMT1-209ENST00000587633 ABCA5Q8WWZ7 1642 aa32■■■□□ 2.71
TRMT1-209ENST00000587633 SUPT5HO00267 1087 aaKnown RBP32■■■□□ 2.71
TRMT1-209ENST00000587633 WRNQ14191 1432 aaPredicted RBP eCLIP31.95■■■□□ 2.71
TRMT1-209ENST00000587633 GRIN2AQ12879 1464 aa31.89■■■□□ 2.7
TRMT1-209ENST00000587633 NUP160Q12769 1436 aa31.81■■■□□ 2.68
TRMT1-209ENST00000587633 TOP2BQ02880 1626 aa31.78■■■□□ 2.68
TRMT1-209ENST00000587633 ADAMTS12P58397 1594 aa31.77■■■□□ 2.68
TRMT1-209ENST00000587633 FHAD1B1AJZ9 1412 aa31.77■■■□□ 2.68
TRMT1-209ENST00000587633 ERCC6L2Q5T890 1561 aa31.75■■■□□ 2.67
TRMT1-209ENST00000587633 BIVM-ERCC5R4GMW8 1640 aa31.75■■■□□ 2.67
TRMT1-209ENST00000587633 CEP170Q5SW79 1584 aa31.73■■■□□ 2.67
TRMT1-209ENST00000587633 AEBP2Q6ZN18 517 aaPredicted RBP31.68■■■□□ 2.66
TRMT1-209ENST00000587633 ERICH3Q5RHP9 1530 aa31.68■■■□□ 2.66
TRMT1-209ENST00000587633 SHROOM2Q13796 1616 aa31.64■■■□□ 2.66
TRMT1-209ENST00000587633 JPH4Q96JJ6 628 aa31.56■■■□□ 2.64
TRMT1-209ENST00000587633 PRG4Q92954 1404 aaPredicted RBP31.53■■■□□ 2.64
TRMT1-209ENST00000587633 NPM1P06748 294 aaKnown RBP eCLIP31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms