RNA–Protein interactions for RNA: ENST00000587581.1

UBE2O-205, Transcript of ubiquitin conjugating enzyme E2 O, humanhuman

TSL 4

Gene UBE2O, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2O-205ENST00000587581 NISCHQ9Y2I1 1504 aa36.85■■■■□ 3.49
UBE2O-205ENST00000587581 CCDC180Q9P1Z9 1646 aa32.89■■■□□ 2.86
UBE2O-205ENST00000587581 ABCC9O60706 1549 aa32.58■■■□□ 2.81
UBE2O-205ENST00000587581 RB1CC1Q8TDY2 1594 aa31.16■■■□□ 2.58
UBE2O-205ENST00000587581 NACADO15069 1562 aa31.05■■■□□ 2.56
UBE2O-205ENST00000587581 DCAF8L2P0C7V8 631 aa30.97■■■□□ 2.55
UBE2O-205ENST00000587581 MYO15BQ96JP2 1530 aa30.75■■■□□ 2.51
UBE2O-205ENST00000587581 ZCCHC6Q5VYS8 1495 aaKnown RBP30.6■■■□□ 2.49
UBE2O-205ENST00000587581 DCAF1Q9Y4B6 1507 aa30.47■■■□□ 2.47
UBE2O-205ENST00000587581 UNC13AQ9UPW8 1703 aa30.44■■■□□ 2.46
UBE2O-205ENST00000587581 PABPN1Q86U42 306 aaKnown RBP eCLIP30.42■■■□□ 2.46
UBE2O-205ENST00000587581 DNAJC5BQ9UF47 199 aa30.33■■■□□ 2.45
UBE2O-205ENST00000587581 BICRAQ9NZM4 1560 aa30.26■■■□□ 2.43
UBE2O-205ENST00000587581 SCRIBQ14160 1630 aa29.97■■■□□ 2.39
UBE2O-205ENST00000587581 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
UBE2O-205ENST00000587581 EIF4G1Q04637 1599 aaKnown RBP29.47■■■□□ 2.31
UBE2O-205ENST00000587581 CC2D2AQ9P2K1 1620 aa29.45■■■□□ 2.3
UBE2O-205ENST00000587581 CECR2Q9BXF3 1484 aa29.31■■■□□ 2.28
UBE2O-205ENST00000587581 NCAPD3P42695 1498 aa28.68■■■□□ 2.18
UBE2O-205ENST00000587581 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
UBE2O-205ENST00000587581 ATAD2BQ9ULI0 1458 aa28.62■■■□□ 2.17
UBE2O-205ENST00000587581 BAZ1AQ9NRL2 1556 aaPredicted RBP28.57■■■□□ 2.16
UBE2O-205ENST00000587581 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
UBE2O-205ENST00000587581 HMGXB3Q12766 1538 aa28.45■■■□□ 2.15
UBE2O-205ENST00000587581 MROH2BQ7Z745 1585 aa28.4■■■□□ 2.14
UBE2O-205ENST00000587581 PEG3Q9GZU2 1588 aa28.4■■■□□ 2.14
UBE2O-205ENST00000587581 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
UBE2O-205ENST00000587581 NESP48681 1621 aa28.1■■■□□ 2.09
UBE2O-205ENST00000587581 ERCC6Q03468 1493 aa28.08■■■□□ 2.09
UBE2O-205ENST00000587581 WIZO95785 1651 aa28.07■■■□□ 2.08
UBE2O-205ENST00000587581 RSF1Q96T23 1441 aaPredicted RBP27.95■■■□□ 2.07
UBE2O-205ENST00000587581 LAMC3Q9Y6N6 1575 aa27.94■■■□□ 2.06
UBE2O-205ENST00000587581 CUX2O14529 1486 aa27.94■■■□□ 2.06
UBE2O-205ENST00000587581 CADPSQ9ULU8 1353 aa27.82■■■□□ 2.04
UBE2O-205ENST00000587581 PDS5BQ9NTI5 1447 aa27.79■■■□□ 2.04
UBE2O-205ENST00000587581 TOP2AP11388 1531 aaKnown RBP27.72■■■□□ 2.03
UBE2O-205ENST00000587581 KIF21AQ7Z4S6 1674 aa27.72■■■□□ 2.03
UBE2O-205ENST00000587581 THOC2Q8NI27 1593 aaKnown RBP27.71■■■□□ 2.03
UBE2O-205ENST00000587581 DNAJC5Q9H3Z4 198 aa27.61■■■□□ 2.01
UBE2O-205ENST00000587581 CFTRP13569 1480 aa27.57■■■□□ 2
UBE2O-205ENST00000587581 MRC2Q9UBG0 1479 aa27.51■■□□□ 1.99
UBE2O-205ENST00000587581 FANCD2Q9BXW9 1451 aa27.48■■□□□ 1.99
UBE2O-205ENST00000587581 CEP164Q9UPV0 1460 aa27.46■■□□□ 1.99
UBE2O-205ENST00000587581 CCDC88BA6NC98 1476 aa27.44■■□□□ 1.98
UBE2O-205ENST00000587581 WDR62O43379 1518 aa27.43■■□□□ 1.98
UBE2O-205ENST00000587581 PRDM2Q13029 1718 aa27.26■■□□□ 1.95
UBE2O-205ENST00000587581 URB2Q14146 1524 aaKnown RBP27.23■■□□□ 1.95
UBE2O-205ENST00000587581 TOPBP1Q92547 1522 aa27■■□□□ 1.91
UBE2O-205ENST00000587581 ABCC8Q09428 1581 aa26.98■■□□□ 1.91
UBE2O-205ENST00000587581 SUPT5HO00267 1087 aaKnown RBP26.96■■□□□ 1.91
UBE2O-205ENST00000587581 IFT140Q96RY7 1462 aa26.92■■□□□ 1.9
UBE2O-205ENST00000587581 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
UBE2O-205ENST00000587581 ZNF608Q9ULD9 1512 aaPredicted RBP26.85■■□□□ 1.89
UBE2O-205ENST00000587581 OSCARQ8IYS5 282 aa26.77■■□□□ 1.88
UBE2O-205ENST00000587581 POLA1P09884 1462 aaPredicted RBP26.74■■□□□ 1.87
UBE2O-205ENST00000587581 TARBP1Q13395 1621 aaKnown RBP26.73■■□□□ 1.87
UBE2O-205ENST00000587581 EIF4G3O43432 1585 aaKnown RBP26.68■■□□□ 1.86
UBE2O-205ENST00000587581 SOGA1O94964 1423 aa26.65■■□□□ 1.86
UBE2O-205ENST00000587581 CUX1P39880 1505 aa26.65■■□□□ 1.86
UBE2O-205ENST00000587581 AQRO60306 1485 aaKnown RBP eCLIP26.65■■□□□ 1.863e-7■■■■■ 45.7
UBE2O-205ENST00000587581 RAD54L2Q9Y4B4 1467 aa26.64■■□□□ 1.86
UBE2O-205ENST00000587581 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
UBE2O-205ENST00000587581 TDRD9Q8NDG6 1382 aaKnown RBP26.55■■□□□ 1.84
UBE2O-205ENST00000587581 TRIM41Q8WV44 630 aa26.48■■□□□ 1.83
UBE2O-205ENST00000587581 WDR97A6NE52 1622 aa26.47■■□□□ 1.83
UBE2O-205ENST00000587581 CHD1O14646 1710 aa26.42■■□□□ 1.82
UBE2O-205ENST00000587581 FBLN2P98095 1184 aa26.4■■□□□ 1.82
UBE2O-205ENST00000587581 SNAPC4Q5SXM2 1469 aa26.36■■□□□ 1.81
UBE2O-205ENST00000587581 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
UBE2O-205ENST00000587581 ABCA10Q8WWZ4 1543 aa26.34■■□□□ 1.81
UBE2O-205ENST00000587581 WRNQ14191 1432 aaPredicted RBP eCLIP26.34■■□□□ 1.81
UBE2O-205ENST00000587581 RIMBP3CA6NJZ7 1639 aa26.33■■□□□ 1.81
UBE2O-205ENST00000587581 RIMBP3BA6NNM3 1639 aa26.33■■□□□ 1.81
UBE2O-205ENST00000587581 RIMBP3Q9UFD9 1639 aa26.33■■□□□ 1.81
UBE2O-205ENST00000587581 GAPVD1Q14C86 1478 aa26.32■■□□□ 1.8
UBE2O-205ENST00000587581 MAGI1Q96QZ7 1491 aaPredicted RBP26.32■■□□□ 1.8
UBE2O-205ENST00000587581 TOP2BQ02880 1626 aa26.32■■□□□ 1.8
UBE2O-205ENST00000587581 BIVM-ERCC5R4GMW8 1640 aa26.31■■□□□ 1.8
UBE2O-205ENST00000587581 ARHGEF11O15085 1522 aa26.29■■□□□ 1.8
UBE2O-205ENST00000587581 SYNJ1O43426 1573 aa26.29■■□□□ 1.8
UBE2O-205ENST00000587581 CHMP7Q8WUX9 453 aaPredicted RBP26.28■■□□□ 1.8
UBE2O-205ENST00000587581 ABCA5Q8WWZ7 1642 aa26.25■■□□□ 1.79
UBE2O-205ENST00000587581 PBRM1Q86U86 1689 aa26.24■■□□□ 1.79
UBE2O-205ENST00000587581 SYNJ2O15056 1496 aa26.23■■□□□ 1.79
UBE2O-205ENST00000587581 CLASP1Q7Z460 1538 aa26.14■■□□□ 1.78
UBE2O-205ENST00000587581 CYB5RLQ6IPT4 315 aa26.12■■□□□ 1.77
UBE2O-205ENST00000587581 ARAP1Q96P48 1450 aa26.05■■□□□ 1.76
UBE2O-205ENST00000587581 GRIN2AQ12879 1464 aa26.02■■□□□ 1.76
UBE2O-205ENST00000587581 ERICH3Q5RHP9 1530 aa26.02■■□□□ 1.76
UBE2O-205ENST00000587581 ADAMTS12P58397 1594 aa26.02■■□□□ 1.76
UBE2O-205ENST00000587581 FHAD1B1AJZ9 1412 aa26■■□□□ 1.75
UBE2O-205ENST00000587581 NUP160Q12769 1436 aa25.93■■□□□ 1.74
UBE2O-205ENST00000587581 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
UBE2O-205ENST00000587581 KIF27Q86VH2 1401 aa25.82■■□□□ 1.72
UBE2O-205ENST00000587581 IGF1RP08069 1367 aa25.81■■□□□ 1.72
UBE2O-205ENST00000587581 ERCC6L2Q5T890 1561 aa25.77■■□□□ 1.72
UBE2O-205ENST00000587581 SHROOM2Q13796 1616 aa25.76■■□□□ 1.71
UBE2O-205ENST00000587581 JPH4Q96JJ6 628 aa25.71■■□□□ 1.71
UBE2O-205ENST00000587581 TRHP20396 242 aaPredicted RBP25.69■■□□□ 1.7
UBE2O-205ENST00000587581 CUL7Q14999 1698 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms