RNA–Protein interactions for RNA: ENST00000587478.1

RPL27-203, Transcript of ribosomal protein L27, humanhuman

TSL 2

Gene RPL27, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL27-203ENST00000587478 NISCHQ9Y2I1 1504 aa51.11■■■■■ 5.77
RPL27-203ENST00000587478 CCDC180Q9P1Z9 1646 aa45.15■■■■■ 4.82
RPL27-203ENST00000587478 ABCC9O60706 1549 aa43.81■■■■■ 4.6
RPL27-203ENST00000587478 DCAF8L2P0C7V8 631 aa42.67■■■■■ 4.42
RPL27-203ENST00000587478 ZCCHC6Q5VYS8 1495 aaKnown RBP42.65■■■■■ 4.42
RPL27-203ENST00000587478 NACADO15069 1562 aa42.42■■■■■ 4.38
RPL27-203ENST00000587478 RB1CC1Q8TDY2 1594 aa42.35■■■■■ 4.37
RPL27-203ENST00000587478 MYO15BQ96JP2 1530 aa42.33■■■■■ 4.37
RPL27-203ENST00000587478 DCAF1Q9Y4B6 1507 aa42.31■■■■■ 4.36
RPL27-203ENST00000587478 SCRIBQ14160 1630 aa41.27■■■■■ 4.2
RPL27-203ENST00000587478 UNC13AQ9UPW8 1703 aa41.19■■■■■ 4.18
RPL27-203ENST00000587478 PABPN1Q86U42 306 aaKnown RBP eCLIP41.08■■■■■ 4.17
RPL27-203ENST00000587478 BICRAQ9NZM4 1560 aa40.96■■■■■ 4.15
RPL27-203ENST00000587478 SHROOM4Q9ULL8 1493 aa40.7■■■■■ 4.11
RPL27-203ENST00000587478 EIF4G1Q04637 1599 aaKnown RBP39.9■■■■□ 3.98
RPL27-203ENST00000587478 DNAJC5BQ9UF47 199 aa39.76■■■■□ 3.96
RPL27-203ENST00000587478 CECR2Q9BXF3 1484 aa39.74■■■■□ 3.95
RPL27-203ENST00000587478 CC2D2AQ9P2K1 1620 aa39.6■■■■□ 3.93
RPL27-203ENST00000587478 BAZ1AQ9NRL2 1556 aaPredicted RBP39.59■■■■□ 3.93
RPL27-203ENST00000587478 SMARCA4P51532 1647 aa39.51■■■■□ 3.92
RPL27-203ENST00000587478 MROH2BQ7Z745 1585 aa39.37■■■■□ 3.89
RPL27-203ENST00000587478 ATAD2BQ9ULI0 1458 aa39.23■■■■□ 3.87
RPL27-203ENST00000587478 SMARCA2P51531 1590 aa39.22■■■■□ 3.87
RPL27-203ENST00000587478 NCAPD3P42695 1498 aa39.16■■■■□ 3.86
RPL27-203ENST00000587478 RSF1Q96T23 1441 aaPredicted RBP39.14■■■■□ 3.86
RPL27-203ENST00000587478 PEG3Q9GZU2 1588 aa39.12■■■■□ 3.85
RPL27-203ENST00000587478 HMGXB3Q12766 1538 aa38.97■■■■□ 3.83
RPL27-203ENST00000587478 BAZ1BQ9UIG0 1483 aaKnown RBP38.97■■■■□ 3.83
RPL27-203ENST00000587478 WIZO95785 1651 aa38.93■■■■□ 3.82
RPL27-203ENST00000587478 TOP2AP11388 1531 aaKnown RBP38.6■■■■□ 3.77
RPL27-203ENST00000587478 SUPT5HO00267 1087 aaKnown RBP38.6■■■■□ 3.77
RPL27-203ENST00000587478 CCDC88BA6NC98 1476 aa38.16■■■■□ 3.7
RPL27-203ENST00000587478 CADPSQ9ULU8 1353 aa38.08■■■■□ 3.69
RPL27-203ENST00000587478 LAMC3Q9Y6N6 1575 aa38.02■■■■□ 3.68
RPL27-203ENST00000587478 NESP48681 1621 aa38.01■■■■□ 3.68
RPL27-203ENST00000587478 CFTRP13569 1480 aa37.91■■■■□ 3.66
RPL27-203ENST00000587478 PDS5BQ9NTI5 1447 aa37.84■■■■□ 3.65
RPL27-203ENST00000587478 ERCC6Q03468 1493 aa37.79■■■■□ 3.64
RPL27-203ENST00000587478 FANCD2Q9BXW9 1451 aa37.61■■■■□ 3.61
RPL27-203ENST00000587478 CEP164Q9UPV0 1460 aa37.52■■■■□ 3.6
RPL27-203ENST00000587478 KIF21AQ7Z4S6 1674 aa37.5■■■■□ 3.59
RPL27-203ENST00000587478 PRDM2Q13029 1718 aa37.5■■■■□ 3.59
RPL27-203ENST00000587478 MRC2Q9UBG0 1479 aa37.37■■■■□ 3.57
RPL27-203ENST00000587478 THOC2Q8NI27 1593 aaKnown RBP37.28■■■■□ 3.56
RPL27-203ENST00000587478 WDR62O43379 1518 aa37.18■■■■□ 3.54
RPL27-203ENST00000587478 CUX2O14529 1486 aa37.18■■■■□ 3.54
RPL27-203ENST00000587478 URB2Q14146 1524 aaKnown RBP37.15■■■■□ 3.54
RPL27-203ENST00000587478 ABCC8Q09428 1581 aa37.13■■■■□ 3.53
RPL27-203ENST00000587478 TOPBP1Q92547 1522 aa37.04■■■■□ 3.52
RPL27-203ENST00000587478 DNMBPQ6XZF7 1577 aa37.03■■■■□ 3.52
RPL27-203ENST00000587478 WRNQ14191 1432 aaPredicted RBP eCLIP36.93■■■■□ 3.55e-10■■□□□ 13.4
RPL27-203ENST00000587478 CUX1P39880 1505 aa36.9■■■■□ 3.5
RPL27-203ENST00000587478 POLA1P09884 1462 aaPredicted RBP36.75■■■■□ 3.47
RPL27-203ENST00000587478 FGD5Q6ZNL6 1462 aa36.74■■■■□ 3.47
RPL27-203ENST00000587478 IFT140Q96RY7 1462 aa36.74■■■■□ 3.47
RPL27-203ENST00000587478 TOP2BQ02880 1626 aa36.71■■■■□ 3.47
RPL27-203ENST00000587478 SYNJ1O43426 1573 aa36.7■■■■□ 3.47
RPL27-203ENST00000587478 SOGA1O94964 1423 aa36.68■■■■□ 3.46
RPL27-203ENST00000587478 BIVM-ERCC5R4GMW8 1640 aa36.67■■■■□ 3.46
RPL27-203ENST00000587478 RAD54L2Q9Y4B4 1467 aa36.59■■■■□ 3.45
RPL27-203ENST00000587478 TARBP1Q13395 1621 aaKnown RBP36.53■■■■□ 3.44
RPL27-203ENST00000587478 TRIM41Q8WV44 630 aa36.47■■■■□ 3.43
RPL27-203ENST00000587478 ZNF608Q9ULD9 1512 aaPredicted RBP36.46■■■■□ 3.43
RPL27-203ENST00000587478 ABCA10Q8WWZ4 1543 aa36.41■■■■□ 3.42
RPL27-203ENST00000587478 TDRD9Q8NDG6 1382 aaKnown RBP36.4■■■■□ 3.42
RPL27-203ENST00000587478 AQRO60306 1485 aaKnown RBP eCLIP36.36■■■■□ 3.411e-8■■■■□ 21.6
RPL27-203ENST00000587478 WDR97A6NE52 1622 aa36.33■■■■□ 3.41
RPL27-203ENST00000587478 EIF4G3O43432 1585 aaKnown RBP36.3■■■■□ 3.4
RPL27-203ENST00000587478 CHIC1Q5VXU3 224 aa36.27■■■■□ 3.4
RPL27-203ENST00000587478 GAPVD1Q14C86 1478 aa36.24■■■■□ 3.39
RPL27-203ENST00000587478 GRIN2BQ13224 1484 aa36.18■■■■□ 3.38
RPL27-203ENST00000587478 KIF27Q86VH2 1401 aa36.16■■■■□ 3.38
RPL27-203ENST00000587478 ABCA5Q8WWZ7 1642 aa36.16■■■■□ 3.38
RPL27-203ENST00000587478 SNAPC4Q5SXM2 1469 aa36.03■■■■□ 3.36
RPL27-203ENST00000587478 MAGI1Q96QZ7 1491 aaPredicted RBP36.02■■■■□ 3.36
RPL27-203ENST00000587478 DNAJC5Q9H3Z4 198 aa36■■■■□ 3.35
RPL27-203ENST00000587478 PBRM1Q86U86 1689 aa35.99■■■■□ 3.35
RPL27-203ENST00000587478 ERICH3Q5RHP9 1530 aa35.98■■■■□ 3.35
RPL27-203ENST00000587478 FBLN2P98095 1184 aa35.93■■■■□ 3.34
RPL27-203ENST00000587478 CHMP7Q8WUX9 453 aaPredicted RBP35.92■■■■□ 3.34
RPL27-203ENST00000587478 IGF1RP08069 1367 aa35.91■■■■□ 3.34
RPL27-203ENST00000587478 SYNJ2O15056 1496 aa35.87■■■■□ 3.33
RPL27-203ENST00000587478 FHAD1B1AJZ9 1412 aa35.86■■■■□ 3.33
RPL27-203ENST00000587478 RUSC2Q8N2Y8 1516 aa35.86■■■■□ 3.33
RPL27-203ENST00000587478 OSCARQ8IYS5 282 aa35.82■■■■□ 3.32
RPL27-203ENST00000587478 ADAMTS12P58397 1594 aa35.8■■■■□ 3.32
RPL27-203ENST00000587478 EEA1Q15075 1411 aa35.79■■■■□ 3.32
RPL27-203ENST00000587478 CARMIL1Q5VZK9 1371 aa35.74■■■■□ 3.31
RPL27-203ENST00000587478 CUL7Q14999 1698 aa35.72■■■■□ 3.31
RPL27-203ENST00000587478 CHD1O14646 1710 aa35.7■■■■□ 3.31
RPL27-203ENST00000587478 CSRNP3Q8WYN3 585 aa35.7■■■■□ 3.31
RPL27-203ENST00000587478 GRIN2AQ12879 1464 aa35.68■■■■□ 3.3
RPL27-203ENST00000587478 FAM9AQ8IZU1 332 aaPredicted RBP35.67■■■■□ 3.3
RPL27-203ENST00000587478 RAPGEF2Q9Y4G8 1499 aa35.55■■■■□ 3.28
RPL27-203ENST00000587478 PRXQ9BXM0 1461 aa35.52■■■■□ 3.28
RPL27-203ENST00000587478 NUP160Q12769 1436 aa35.49■■■■□ 3.27
RPL27-203ENST00000587478 CEP170Q5SW79 1584 aa35.42■■■■□ 3.26
RPL27-203ENST00000587478 CLASP1Q7Z460 1538 aa35.39■■■■□ 3.26
RPL27-203ENST00000587478 KIAA0586Q9BVV6 1533 aa35.32■■■■□ 3.24
RPL27-203ENST00000587478 KIF21BO75037 1637 aa35.27■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms