RNA–Protein interactions for RNA: ENST00000587421.5

SMAD2-210, Transcript of SMAD family member 2, humanhuman

TSL 4

Gene SMAD2, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-210ENST00000587421 NISCHQ9Y2I1 1504 aa34.26■■■■□ 3.08
SMAD2-210ENST00000587421 ABCC9O60706 1549 aa31.33■■■□□ 2.61
SMAD2-210ENST00000587421 CCDC180Q9P1Z9 1646 aa30.81■■■□□ 2.52
SMAD2-210ENST00000587421 DNAJC5BQ9UF47 199 aa29.96■■■□□ 2.39
SMAD2-210ENST00000587421 RB1CC1Q8TDY2 1594 aa29.63■■■□□ 2.33
SMAD2-210ENST00000587421 NACADO15069 1562 aa29.28■■■□□ 2.28
SMAD2-210ENST00000587421 DCAF8L2P0C7V8 631 aa29.12■■■□□ 2.25
SMAD2-210ENST00000587421 PABPN1Q86U42 306 aaKnown RBP eCLIP29■■■□□ 2.23
SMAD2-210ENST00000587421 UNC13AQ9UPW8 1703 aa28.89■■■□□ 2.21
SMAD2-210ENST00000587421 BICRAQ9NZM4 1560 aa28.75■■■□□ 2.19
SMAD2-210ENST00000587421 MYO15BQ96JP2 1530 aa28.74■■■□□ 2.19
SMAD2-210ENST00000587421 SHROOM4Q9ULL8 1493 aa28.45■■■□□ 2.14
SMAD2-210ENST00000587421 CECR2Q9BXF3 1484 aa28.34■■■□□ 2.13
SMAD2-210ENST00000587421 ZCCHC6Q5VYS8 1495 aaKnown RBP28.34■■■□□ 2.13
SMAD2-210ENST00000587421 DCAF1Q9Y4B6 1507 aa28.32■■■□□ 2.12
SMAD2-210ENST00000587421 CC2D2AQ9P2K1 1620 aa28.31■■■□□ 2.12
SMAD2-210ENST00000587421 EIF4G1Q04637 1599 aaKnown RBP28.11■■■□□ 2.09
SMAD2-210ENST00000587421 DNAJC5Q9H3Z4 198 aa28.09■■■□□ 2.09
SMAD2-210ENST00000587421 SCRIBQ14160 1630 aa27.9■■■□□ 2.06
SMAD2-210ENST00000587421 CUX2O14529 1486 aa27.4■■□□□ 1.98
SMAD2-210ENST00000587421 ERCC6Q03468 1493 aa27.13■■□□□ 1.93
SMAD2-210ENST00000587421 NCAPD3P42695 1498 aa27.04■■□□□ 1.92
SMAD2-210ENST00000587421 ATAD2BQ9ULI0 1458 aa26.82■■□□□ 1.88
SMAD2-210ENST00000587421 HMGXB3Q12766 1538 aa26.79■■□□□ 1.88
SMAD2-210ENST00000587421 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
SMAD2-210ENST00000587421 NESP48681 1621 aa26.71■■□□□ 1.87
SMAD2-210ENST00000587421 THOC2Q8NI27 1593 aaKnown RBP26.66■■□□□ 1.86
SMAD2-210ENST00000587421 SMARCA4P51532 1647 aa26.63■■□□□ 1.85
SMAD2-210ENST00000587421 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
SMAD2-210ENST00000587421 LAMC3Q9Y6N6 1575 aa26.54■■□□□ 1.84
SMAD2-210ENST00000587421 BAZ1BQ9UIG0 1483 aaKnown RBP26.51■■□□□ 1.83
SMAD2-210ENST00000587421 TRIM41Q8WV44 630 aa26.46■■□□□ 1.83
SMAD2-210ENST00000587421 PEG3Q9GZU2 1588 aa26.44■■□□□ 1.82
SMAD2-210ENST00000587421 PDS5BQ9NTI5 1447 aa26.39■■□□□ 1.81
SMAD2-210ENST00000587421 KIF21AQ7Z4S6 1674 aa26.38■■□□□ 1.81
SMAD2-210ENST00000587421 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
SMAD2-210ENST00000587421 MRC2Q9UBG0 1479 aa26.18■■□□□ 1.78
SMAD2-210ENST00000587421 WDR62O43379 1518 aa26.17■■□□□ 1.78
SMAD2-210ENST00000587421 CADPSQ9ULU8 1353 aa26.17■■□□□ 1.78
SMAD2-210ENST00000587421 OSCARQ8IYS5 282 aa25.97■■□□□ 1.75
SMAD2-210ENST00000587421 WIZO95785 1651 aa25.95■■□□□ 1.74
SMAD2-210ENST00000587421 CEP164Q9UPV0 1460 aa25.94■■□□□ 1.74
SMAD2-210ENST00000587421 RSF1Q96T23 1441 aaPredicted RBP25.89■■□□□ 1.74
SMAD2-210ENST00000587421 FANCD2Q9BXW9 1451 aa25.84■■□□□ 1.73
SMAD2-210ENST00000587421 CFTRP13569 1480 aa25.79■■□□□ 1.72
SMAD2-210ENST00000587421 RIMBP3CA6NJZ7 1639 aa25.7■■□□□ 1.7
SMAD2-210ENST00000587421 RIMBP3BA6NNM3 1639 aa25.7■■□□□ 1.7
SMAD2-210ENST00000587421 RIMBP3Q9UFD9 1639 aa25.7■■□□□ 1.7
SMAD2-210ENST00000587421 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
SMAD2-210ENST00000587421 URB2Q14146 1524 aaKnown RBP25.65■■□□□ 1.7
SMAD2-210ENST00000587421 ARHGEF11O15085 1522 aa25.57■■□□□ 1.68
SMAD2-210ENST00000587421 CCDC88BA6NC98 1476 aa25.49■■□□□ 1.67
SMAD2-210ENST00000587421 IFT140Q96RY7 1462 aa25.47■■□□□ 1.67
SMAD2-210ENST00000587421 ZNF608Q9ULD9 1512 aaPredicted RBP25.42■■□□□ 1.66
SMAD2-210ENST00000587421 PRDM2Q13029 1718 aa25.41■■□□□ 1.66
SMAD2-210ENST00000587421 CYB5RLQ6IPT4 315 aa25.34■■□□□ 1.65
SMAD2-210ENST00000587421 EIF4G3O43432 1585 aaKnown RBP25.28■■□□□ 1.64
SMAD2-210ENST00000587421 ABCC8Q09428 1581 aa25.28■■□□□ 1.64
SMAD2-210ENST00000587421 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
SMAD2-210ENST00000587421 TRHP20396 242 aaPredicted RBP25.27■■□□□ 1.64
SMAD2-210ENST00000587421 ARAP1Q96P48 1450 aa25.26■■□□□ 1.63
SMAD2-210ENST00000587421 CHD1O14646 1710 aa25.2■■□□□ 1.62
SMAD2-210ENST00000587421 DNMBPQ6XZF7 1577 aa25.14■■□□□ 1.61
SMAD2-210ENST00000587421 TARBP1Q13395 1621 aaKnown RBP25.11■■□□□ 1.61
SMAD2-210ENST00000587421 AQRO60306 1485 aaKnown RBP eCLIP25.09■■□□□ 1.61
SMAD2-210ENST00000587421 AEBP2Q6ZN18 517 aaPredicted RBP25.06■■□□□ 1.6
SMAD2-210ENST00000587421 FBLN2P98095 1184 aa25.02■■□□□ 1.6
SMAD2-210ENST00000587421 POLA1P09884 1462 aaPredicted RBP24.99■■□□□ 1.59
SMAD2-210ENST00000587421 SOGA1O94964 1423 aa24.98■■□□□ 1.59
SMAD2-210ENST00000587421 CLASP1Q7Z460 1538 aa24.95■■□□□ 1.58
SMAD2-210ENST00000587421 TDRD9Q8NDG6 1382 aaKnown RBP24.93■■□□□ 1.58
SMAD2-210ENST00000587421 RAD54L2Q9Y4B4 1467 aa24.92■■□□□ 1.58
SMAD2-210ENST00000587421 WDR97A6NE52 1622 aa24.9■■□□□ 1.58
SMAD2-210ENST00000587421 SYNJ1O43426 1573 aa24.88■■□□□ 1.57
SMAD2-210ENST00000587421 SNAPC4Q5SXM2 1469 aa24.84■■□□□ 1.57
SMAD2-210ENST00000587421 CHMP7Q8WUX9 453 aaPredicted RBP24.82■■□□□ 1.56
SMAD2-210ENST00000587421 MAGI1Q96QZ7 1491 aaPredicted RBP24.82■■□□□ 1.56
SMAD2-210ENST00000587421 FGD5Q6ZNL6 1462 aa24.81■■□□□ 1.56
SMAD2-210ENST00000587421 SUPT5HO00267 1087 aaKnown RBP24.76■■□□□ 1.55
SMAD2-210ENST00000587421 CUX1P39880 1505 aa24.76■■□□□ 1.55
SMAD2-210ENST00000587421 SYNJ2O15056 1496 aa24.73■■□□□ 1.55
SMAD2-210ENST00000587421 GRIN2BQ13224 1484 aa24.73■■□□□ 1.55
SMAD2-210ENST00000587421 GAPVD1Q14C86 1478 aa24.7■■□□□ 1.55
SMAD2-210ENST00000587421 ABCA10Q8WWZ4 1543 aa24.56■■□□□ 1.52
SMAD2-210ENST00000587421 PBRM1Q86U86 1689 aa24.55■■□□□ 1.52
SMAD2-210ENST00000587421 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.52
SMAD2-210ENST00000587421 ABCA5Q8WWZ7 1642 aa24.44■■□□□ 1.5
SMAD2-210ENST00000587421 ERCC6L2Q5T890 1561 aa24.42■■□□□ 1.5
SMAD2-210ENST00000587421 GRIN2AQ12879 1464 aa24.4■■□□□ 1.5
SMAD2-210ENST00000587421 CEP170Q5SW79 1584 aa24.38■■□□□ 1.49
SMAD2-210ENST00000587421 NUP160Q12769 1436 aa24.36■■□□□ 1.49
SMAD2-210ENST00000587421 KIF13AQ9H1H9 1805 aa24.35■■□□□ 1.49
SMAD2-210ENST00000587421 SHROOM2Q13796 1616 aa24.35■■□□□ 1.49
SMAD2-210ENST00000587421 FHAD1B1AJZ9 1412 aa24.34■■□□□ 1.49
SMAD2-210ENST00000587421 TOP2BQ02880 1626 aa24.32■■□□□ 1.48
SMAD2-210ENST00000587421 ADAMTS12P58397 1594 aa24.3■■□□□ 1.48
SMAD2-210ENST00000587421 BIVM-ERCC5R4GMW8 1640 aa24.25■■□□□ 1.47
SMAD2-210ENST00000587421 ERICH3Q5RHP9 1530 aa24.23■■□□□ 1.47
SMAD2-210ENST00000587421 JPH4Q96JJ6 628 aa24.22■■□□□ 1.47
SMAD2-210ENST00000587421 ABCC10Q5T3U5 1492 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms