RNA–Protein interactions for RNA: ENST00000587405.5

RAD51D-212, Transcript of RAD51 paralog D, humanhuman

TSL 5

Gene RAD51D, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51D-212ENST00000587405 NISCHQ9Y2I1 1504 aa31.08■■■□□ 2.57
RAD51D-212ENST00000587405 CCDC180Q9P1Z9 1646 aa27.62■■■□□ 2.01
RAD51D-212ENST00000587405 ABCC9O60706 1549 aa27.05■■□□□ 1.92
RAD51D-212ENST00000587405 RB1CC1Q8TDY2 1594 aa25.95■■□□□ 1.74
RAD51D-212ENST00000587405 NACADO15069 1562 aa25.92■■□□□ 1.74
RAD51D-212ENST00000587405 ZCCHC6Q5VYS8 1495 aaKnown RBP25.91■■□□□ 1.74
RAD51D-212ENST00000587405 DCAF8L2P0C7V8 631 aa25.8■■□□□ 1.72
RAD51D-212ENST00000587405 MYO15BQ96JP2 1530 aa25.78■■□□□ 1.72
RAD51D-212ENST00000587405 DCAF1Q9Y4B6 1507 aa25.69■■□□□ 1.7
RAD51D-212ENST00000587405 UNC13AQ9UPW8 1703 aa25.54■■□□□ 1.68
RAD51D-212ENST00000587405 BICRAQ9NZM4 1560 aa25.35■■□□□ 1.65
RAD51D-212ENST00000587405 PABPN1Q86U42 306 aaKnown RBP eCLIP25.26■■□□□ 1.63
RAD51D-212ENST00000587405 SCRIBQ14160 1630 aa25.23■■□□□ 1.63
RAD51D-212ENST00000587405 DNAJC5BQ9UF47 199 aa24.96■■□□□ 1.59
RAD51D-212ENST00000587405 SHROOM4Q9ULL8 1493 aa24.87■■□□□ 1.57
RAD51D-212ENST00000587405 EIF4G1Q04637 1599 aaKnown RBP24.58■■□□□ 1.52
RAD51D-212ENST00000587405 CC2D2AQ9P2K1 1620 aa24.49■■□□□ 1.51
RAD51D-212ENST00000587405 CECR2Q9BXF3 1484 aa24.29■■□□□ 1.48
RAD51D-212ENST00000587405 SMARCA4P51532 1647 aa24.13■■□□□ 1.45
RAD51D-212ENST00000587405 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
RAD51D-212ENST00000587405 MROH2BQ7Z745 1585 aa24.01■■□□□ 1.43
RAD51D-212ENST00000587405 ATAD2BQ9ULI0 1458 aa23.99■■□□□ 1.43
RAD51D-212ENST00000587405 NCAPD3P42695 1498 aa23.95■■□□□ 1.42
RAD51D-212ENST00000587405 PEG3Q9GZU2 1588 aa23.91■■□□□ 1.42
RAD51D-212ENST00000587405 SMARCA2P51531 1590 aa23.89■■□□□ 1.41
RAD51D-212ENST00000587405 HMGXB3Q12766 1538 aa23.84■■□□□ 1.41
RAD51D-212ENST00000587405 WIZO95785 1651 aa23.75■■□□□ 1.39
RAD51D-212ENST00000587405 BAZ1BQ9UIG0 1483 aaKnown RBP23.73■■□□□ 1.39
RAD51D-212ENST00000587405 RSF1Q96T23 1441 aaPredicted RBP23.69■■□□□ 1.38
RAD51D-212ENST00000587405 NESP48681 1621 aa23.48■■□□□ 1.35
RAD51D-212ENST00000587405 TOP2AP11388 1531 aaKnown RBP23.43■■□□□ 1.34
RAD51D-212ENST00000587405 LAMC3Q9Y6N6 1575 aa23.29■■□□□ 1.32
RAD51D-212ENST00000587405 CADPSQ9ULU8 1353 aa23.23■■□□□ 1.31
RAD51D-212ENST00000587405 ERCC6Q03468 1493 aa23.19■■□□□ 1.3
RAD51D-212ENST00000587405 KIF21AQ7Z4S6 1674 aa23.19■■□□□ 1.3
RAD51D-212ENST00000587405 CCDC88BA6NC98 1476 aa23.17■■□□□ 1.3
RAD51D-212ENST00000587405 CFTRP13569 1480 aa23.13■■□□□ 1.29
RAD51D-212ENST00000587405 THOC2Q8NI27 1593 aaKnown RBP23.11■■□□□ 1.29
RAD51D-212ENST00000587405 PDS5BQ9NTI5 1447 aa23.07■■□□□ 1.28
RAD51D-212ENST00000587405 CUX2O14529 1486 aa23■■□□□ 1.27
RAD51D-212ENST00000587405 PRDM2Q13029 1718 aa22.98■■□□□ 1.27
RAD51D-212ENST00000587405 FANCD2Q9BXW9 1451 aa22.98■■□□□ 1.27
RAD51D-212ENST00000587405 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
RAD51D-212ENST00000587405 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
RAD51D-212ENST00000587405 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
RAD51D-212ENST00000587405 WDR62O43379 1518 aa22.88■■□□□ 1.25
RAD51D-212ENST00000587405 URB2Q14146 1524 aaKnown RBP22.83■■□□□ 1.25
RAD51D-212ENST00000587405 DNAJC5Q9H3Z4 198 aa22.74■■□□□ 1.23
RAD51D-212ENST00000587405 TOPBP1Q92547 1522 aa22.64■■□□□ 1.21
RAD51D-212ENST00000587405 DNMBPQ6XZF7 1577 aa22.59■■□□□ 1.21
RAD51D-212ENST00000587405 CUX1P39880 1505 aa22.52■■□□□ 1.19
RAD51D-212ENST00000587405 ABCC8Q09428 1581 aa22.5■■□□□ 1.19
RAD51D-212ENST00000587405 POLA1P09884 1462 aaPredicted RBP22.46■■□□□ 1.19
RAD51D-212ENST00000587405 ZNF608Q9ULD9 1512 aaPredicted RBP22.46■■□□□ 1.19
RAD51D-212ENST00000587405 TARBP1Q13395 1621 aaKnown RBP22.45■■□□□ 1.18
RAD51D-212ENST00000587405 IFT140Q96RY7 1462 aa22.44■■□□□ 1.18
RAD51D-212ENST00000587405 FGD5Q6ZNL6 1462 aa22.39■■□□□ 1.17
RAD51D-212ENST00000587405 RAD54L2Q9Y4B4 1467 aa22.38■■□□□ 1.17
RAD51D-212ENST00000587405 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.17
RAD51D-212ENST00000587405 SYNJ1O43426 1573 aa22.33■■□□□ 1.16
RAD51D-212ENST00000587405 SOGA1O94964 1423 aa22.3■■□□□ 1.16
RAD51D-212ENST00000587405 BIVM-ERCC5R4GMW8 1640 aa22.29■■□□□ 1.16
RAD51D-212ENST00000587405 WDR97A6NE52 1622 aa22.28■■□□□ 1.16
RAD51D-212ENST00000587405 AQRO60306 1485 aaKnown RBP eCLIP22.28■■□□□ 1.164e-7■■■■□ 26
RAD51D-212ENST00000587405 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
RAD51D-212ENST00000587405 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.155e-11■■■■■ 40
RAD51D-212ENST00000587405 TDRD9Q8NDG6 1382 aaKnown RBP22.22■■□□□ 1.15
RAD51D-212ENST00000587405 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
RAD51D-212ENST00000587405 ABCA5Q8WWZ7 1642 aa22.13■■□□□ 1.13
RAD51D-212ENST00000587405 CHD1O14646 1710 aa22.08■■□□□ 1.12
RAD51D-212ENST00000587405 PBRM1Q86U86 1689 aa22.07■■□□□ 1.12
RAD51D-212ENST00000587405 SNAPC4Q5SXM2 1469 aa22.06■■□□□ 1.12
RAD51D-212ENST00000587405 GAPVD1Q14C86 1478 aa22.04■■□□□ 1.12
RAD51D-212ENST00000587405 GRIN2BQ13224 1484 aa22.03■■□□□ 1.12
RAD51D-212ENST00000587405 OSCARQ8IYS5 282 aa21.99■■□□□ 1.11
RAD51D-212ENST00000587405 MAGI1Q96QZ7 1491 aaPredicted RBP21.97■■□□□ 1.11
RAD51D-212ENST00000587405 SYNJ2O15056 1496 aa21.9■■□□□ 1.1
RAD51D-212ENST00000587405 ADAMTS12P58397 1594 aa21.9■■□□□ 1.1
RAD51D-212ENST00000587405 FBLN2P98095 1184 aa21.87■■□□□ 1.09
RAD51D-212ENST00000587405 ERICH3Q5RHP9 1530 aa21.86■■□□□ 1.09
RAD51D-212ENST00000587405 CLASP1Q7Z460 1538 aa21.84■■□□□ 1.09
RAD51D-212ENST00000587405 CHMP7Q8WUX9 453 aaPredicted RBP21.8■■□□□ 1.08
RAD51D-212ENST00000587405 RIMBP3CA6NJZ7 1639 aa21.79■■□□□ 1.08
RAD51D-212ENST00000587405 RIMBP3BA6NNM3 1639 aa21.79■■□□□ 1.08
RAD51D-212ENST00000587405 RIMBP3Q9UFD9 1639 aa21.79■■□□□ 1.08
RAD51D-212ENST00000587405 GRIN2AQ12879 1464 aa21.78■■□□□ 1.08
RAD51D-212ENST00000587405 FHAD1B1AJZ9 1412 aa21.78■■□□□ 1.08
RAD51D-212ENST00000587405 ARHGEF11O15085 1522 aa21.75■■□□□ 1.07
RAD51D-212ENST00000587405 IGF1RP08069 1367 aa21.75■■□□□ 1.07
RAD51D-212ENST00000587405 CEP170Q5SW79 1584 aa21.75■■□□□ 1.07
RAD51D-212ENST00000587405 KIF27Q86VH2 1401 aa21.75■■□□□ 1.07
RAD51D-212ENST00000587405 RUSC2Q8N2Y8 1516 aa21.75■■□□□ 1.07
RAD51D-212ENST00000587405 NUP160Q12769 1436 aa21.72■■□□□ 1.07
RAD51D-212ENST00000587405 CUL7Q14999 1698 aa21.66■■□□□ 1.06
RAD51D-212ENST00000587405 TRIM41Q8WV44 630 aa21.63■■□□□ 1.05
RAD51D-212ENST00000587405 ARAP1Q96P48 1450 aa21.62■■□□□ 1.05
RAD51D-212ENST00000587405 ERCC6L2Q5T890 1561 aa21.61■■□□□ 1.05
RAD51D-212ENST00000587405 SHROOM2Q13796 1616 aa21.59■■□□□ 1.05
RAD51D-212ENST00000587405 CARMIL1Q5VZK9 1371 aa21.57■■□□□ 1.04
RAD51D-212ENST00000587405 CHIC1Q5VXU3 224 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms