RNA–Protein interactions for RNA: ENST00000587396.1

CXXC1-210, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-210ENST00000587396 NISCHQ9Y2I1 1504 aa45.93■■■■■ 4.94
CXXC1-210ENST00000587396 ABCC9O60706 1549 aa42.22■■■■■ 4.35
CXXC1-210ENST00000587396 CCDC180Q9P1Z9 1646 aa41.31■■■■■ 4.2
CXXC1-210ENST00000587396 DNAJC5BQ9UF47 199 aa40.26■■■■■ 4.04
CXXC1-210ENST00000587396 RB1CC1Q8TDY2 1594 aa39.72■■■■□ 3.95
CXXC1-210ENST00000587396 PABPN1Q86U42 306 aaKnown RBP eCLIP39.32■■■■□ 3.89
CXXC1-210ENST00000587396 DCAF8L2P0C7V8 631 aa39.3■■■■□ 3.88
CXXC1-210ENST00000587396 NACADO15069 1562 aa39.28■■■■□ 3.88
CXXC1-210ENST00000587396 UNC13AQ9UPW8 1703 aa38.8■■■■□ 3.8
CXXC1-210ENST00000587396 BICRAQ9NZM4 1560 aa38.65■■■■□ 3.78
CXXC1-210ENST00000587396 MYO15BQ96JP2 1530 aa38.46■■■■□ 3.75
CXXC1-210ENST00000587396 CECR2Q9BXF3 1484 aa38.03■■■■□ 3.68
CXXC1-210ENST00000587396 CC2D2AQ9P2K1 1620 aa38■■■■□ 3.67
CXXC1-210ENST00000587396 ZCCHC6Q5VYS8 1495 aaKnown RBP37.9■■■■□ 3.66
CXXC1-210ENST00000587396 SHROOM4Q9ULL8 1493 aa37.88■■■■□ 3.65
CXXC1-210ENST00000587396 SCRIBQ14160 1630 aa37.83■■■■□ 3.65
CXXC1-210ENST00000587396 DCAF1Q9Y4B6 1507 aa37.77■■■■□ 3.64
CXXC1-210ENST00000587396 EIF4G1Q04637 1599 aaKnown RBP37.75■■■■□ 3.63
CXXC1-210ENST00000587396 DNAJC5Q9H3Z4 198 aa37.31■■■■□ 3.56
CXXC1-210ENST00000587396 CUX2O14529 1486 aa36.48■■■■□ 3.43
CXXC1-210ENST00000587396 ERCC6Q03468 1493 aa36.44■■■■□ 3.42
CXXC1-210ENST00000587396 NCAPD3P42695 1498 aa36.33■■■■□ 3.41
CXXC1-210ENST00000587396 ATAD2BQ9ULI0 1458 aa36.18■■■■□ 3.38
CXXC1-210ENST00000587396 NESP48681 1621 aa36.1■■■■□ 3.37
CXXC1-210ENST00000587396 SMARCA2P51531 1590 aa35.95■■■■□ 3.35
CXXC1-210ENST00000587396 HMGXB3Q12766 1538 aa35.94■■■■□ 3.34
CXXC1-210ENST00000587396 SMARCA4P51532 1647 aa35.94■■■■□ 3.34
CXXC1-210ENST00000587396 BAZ1BQ9UIG0 1483 aaKnown RBP35.79■■■■□ 3.32
CXXC1-210ENST00000587396 THOC2Q8NI27 1593 aaKnown RBP35.71■■■■□ 3.31
CXXC1-210ENST00000587396 BAZ1AQ9NRL2 1556 aaPredicted RBP35.64■■■■□ 3.3
CXXC1-210ENST00000587396 TRIM41Q8WV44 630 aa35.56■■■■□ 3.28
CXXC1-210ENST00000587396 LAMC3Q9Y6N6 1575 aa35.55■■■■□ 3.28
CXXC1-210ENST00000587396 PEG3Q9GZU2 1588 aa35.51■■■■□ 3.28
CXXC1-210ENST00000587396 KIF21AQ7Z4S6 1674 aa35.48■■■■□ 3.27
CXXC1-210ENST00000587396 MROH2BQ7Z745 1585 aa35.45■■■■□ 3.27
CXXC1-210ENST00000587396 PDS5BQ9NTI5 1447 aa35.44■■■■□ 3.26
CXXC1-210ENST00000587396 CADPSQ9ULU8 1353 aa35.25■■■■□ 3.23
CXXC1-210ENST00000587396 MRC2Q9UBG0 1479 aa35.18■■■■□ 3.22
CXXC1-210ENST00000587396 WDR62O43379 1518 aa35.07■■■■□ 3.21
CXXC1-210ENST00000587396 WIZO95785 1651 aa34.97■■■■□ 3.19
CXXC1-210ENST00000587396 CEP164Q9UPV0 1460 aa34.92■■■■□ 3.18
CXXC1-210ENST00000587396 FANCD2Q9BXW9 1451 aa34.86■■■■□ 3.17
CXXC1-210ENST00000587396 OSCARQ8IYS5 282 aa34.84■■■■□ 3.17
CXXC1-210ENST00000587396 CFTRP13569 1480 aa34.68■■■■□ 3.14
CXXC1-210ENST00000587396 URB2Q14146 1524 aaKnown RBP34.63■■■■□ 3.13
CXXC1-210ENST00000587396 RSF1Q96T23 1441 aaPredicted RBP34.49■■■■□ 3.11
CXXC1-210ENST00000587396 TOP2AP11388 1531 aaKnown RBP34.42■■■■□ 3.1
CXXC1-210ENST00000587396 RIMBP3CA6NJZ7 1639 aa34.39■■■■□ 3.1
CXXC1-210ENST00000587396 RIMBP3BA6NNM3 1639 aa34.39■■■■□ 3.1
CXXC1-210ENST00000587396 RIMBP3Q9UFD9 1639 aa34.39■■■■□ 3.1
CXXC1-210ENST00000587396 ZNF608Q9ULD9 1512 aaPredicted RBP34.35■■■■□ 3.09
CXXC1-210ENST00000587396 ARHGEF11O15085 1522 aa34.24■■■■□ 3.07
CXXC1-210ENST00000587396 IFT140Q96RY7 1462 aa34.23■■■■□ 3.07
CXXC1-210ENST00000587396 CYB5RLQ6IPT4 315 aa34.16■■■■□ 3.06
CXXC1-210ENST00000587396 CCDC88BA6NC98 1476 aa34.13■■■■□ 3.05
CXXC1-210ENST00000587396 TOPBP1Q92547 1522 aa34.12■■■■□ 3.05
CXXC1-210ENST00000587396 PRDM2Q13029 1718 aa34.1■■■■□ 3.05
CXXC1-210ENST00000587396 EIF4G3O43432 1585 aaKnown RBP34.02■■■■□ 3.04
CXXC1-210ENST00000587396 TRHP20396 242 aaPredicted RBP34■■■■□ 3.03
CXXC1-210ENST00000587396 AQRO60306 1485 aaKnown RBP eCLIP33.98■■■■□ 3.038e-7■■■□□ 15.6
CXXC1-210ENST00000587396 FBLN2P98095 1184 aa33.95■■■■□ 3.03
CXXC1-210ENST00000587396 ABCC8Q09428 1581 aa33.89■■■■□ 3.02
CXXC1-210ENST00000587396 ARAP1Q96P48 1450 aa33.88■■■■□ 3.01
CXXC1-210ENST00000587396 DNMBPQ6XZF7 1577 aa33.88■■■■□ 3.01
CXXC1-210ENST00000587396 CHD1O14646 1710 aa33.87■■■■□ 3.01
CXXC1-210ENST00000587396 TARBP1Q13395 1621 aaKnown RBP33.81■■■■□ 3
CXXC1-210ENST00000587396 POLA1P09884 1462 aaPredicted RBP33.74■■■□□ 2.99
CXXC1-210ENST00000587396 RAD54L2Q9Y4B4 1467 aa33.71■■■□□ 2.99
CXXC1-210ENST00000587396 TDRD9Q8NDG6 1382 aaKnown RBP33.69■■■□□ 2.98
CXXC1-210ENST00000587396 SOGA1O94964 1423 aa33.61■■■□□ 2.97
CXXC1-210ENST00000587396 SNAPC4Q5SXM2 1469 aa33.56■■■□□ 2.96
CXXC1-210ENST00000587396 CHMP7Q8WUX9 453 aaPredicted RBP33.53■■■□□ 2.96
CXXC1-210ENST00000587396 CLASP1Q7Z460 1538 aa33.47■■■□□ 2.95
CXXC1-210ENST00000587396 FGD5Q6ZNL6 1462 aa33.45■■■□□ 2.95
CXXC1-210ENST00000587396 AEBP2Q6ZN18 517 aaPredicted RBP33.42■■■□□ 2.94
CXXC1-210ENST00000587396 SYNJ1O43426 1573 aa33.37■■■□□ 2.93
CXXC1-210ENST00000587396 MAGI1Q96QZ7 1491 aaPredicted RBP33.34■■■□□ 2.93
CXXC1-210ENST00000587396 GRIN2BQ13224 1484 aa33.33■■■□□ 2.93
CXXC1-210ENST00000587396 CUX1P39880 1505 aa33.33■■■□□ 2.93
CXXC1-210ENST00000587396 SYNJ2O15056 1496 aa33.28■■■□□ 2.92
CXXC1-210ENST00000587396 WDR97A6NE52 1622 aa33.28■■■□□ 2.92
CXXC1-210ENST00000587396 GAPVD1Q14C86 1478 aa33.22■■■□□ 2.91
CXXC1-210ENST00000587396 PBRM1Q86U86 1689 aa33.08■■■□□ 2.89
CXXC1-210ENST00000587396 ERCC6L2Q5T890 1561 aa33.03■■■□□ 2.88
CXXC1-210ENST00000587396 ABCA10Q8WWZ4 1543 aa32.97■■■□□ 2.87
CXXC1-210ENST00000587396 ABCA5Q8WWZ7 1642 aa32.95■■■□□ 2.87
CXXC1-210ENST00000587396 GRIN2AQ12879 1464 aa32.91■■■□□ 2.86
CXXC1-210ENST00000587396 CEP170Q5SW79 1584 aa32.84■■■□□ 2.85
CXXC1-210ENST00000587396 NUP160Q12769 1436 aa32.81■■■□□ 2.84
CXXC1-210ENST00000587396 ADAMTS12P58397 1594 aa32.77■■■□□ 2.84
CXXC1-210ENST00000587396 WRNQ14191 1432 aaPredicted RBP eCLIP32.77■■■□□ 2.84
CXXC1-210ENST00000587396 FHAD1B1AJZ9 1412 aa32.68■■■□□ 2.82
CXXC1-210ENST00000587396 SUPT5HO00267 1087 aaKnown RBP32.68■■■□□ 2.82
CXXC1-210ENST00000587396 SHROOM2Q13796 1616 aa32.66■■■□□ 2.82
CXXC1-210ENST00000587396 PRG4Q92954 1404 aaPredicted RBP32.62■■■□□ 2.81
CXXC1-210ENST00000587396 KIF13AQ9H1H9 1805 aa32.58■■■□□ 2.81
CXXC1-210ENST00000587396 JPH4Q96JJ6 628 aa32.57■■■□□ 2.8
CXXC1-210ENST00000587396 FAM69CQ0P6D2 419 aa32.54■■■□□ 2.8
CXXC1-210ENST00000587396 TOP2BQ02880 1626 aa32.54■■■□□ 2.8
CXXC1-210ENST00000587396 ERICH3Q5RHP9 1530 aa32.51■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms