RNA–Protein interactions for RNA: ENST00000587388.5

HDHD2-203, Transcript of haloacid dehalogenase like hydrolase domain containing 2, humanhuman

TSL 3

Gene HDHD2, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2-203ENST00000587388 NISCHQ9Y2I1 1504 aa42.71■■■■■ 4.43
HDHD2-203ENST00000587388 ABCC9O60706 1549 aa38.58■■■■□ 3.77
HDHD2-203ENST00000587388 CCDC180Q9P1Z9 1646 aa38.42■■■■□ 3.74
HDHD2-203ENST00000587388 RB1CC1Q8TDY2 1594 aa36.7■■■■□ 3.46
HDHD2-203ENST00000587388 NACADO15069 1562 aa36.4■■■■□ 3.42
HDHD2-203ENST00000587388 DNAJC5BQ9UF47 199 aa36.38■■■■□ 3.41
HDHD2-203ENST00000587388 DCAF8L2P0C7V8 631 aa36.12■■■■□ 3.37
HDHD2-203ENST00000587388 MYO15BQ96JP2 1530 aa35.88■■■■□ 3.33
HDHD2-203ENST00000587388 PABPN1Q86U42 306 aaKnown RBP eCLIP35.88■■■■□ 3.33
HDHD2-203ENST00000587388 UNC13AQ9UPW8 1703 aa35.74■■■■□ 3.31
HDHD2-203ENST00000587388 BICRAQ9NZM4 1560 aa35.58■■■■□ 3.29
HDHD2-203ENST00000587388 ZCCHC6Q5VYS8 1495 aaKnown RBP35.34■■■■□ 3.25
HDHD2-203ENST00000587388 DCAF1Q9Y4B6 1507 aa35.32■■■■□ 3.25
HDHD2-203ENST00000587388 SHROOM4Q9ULL8 1493 aa35.21■■■■□ 3.23
HDHD2-203ENST00000587388 SCRIBQ14160 1630 aa34.92■■■■□ 3.18
HDHD2-203ENST00000587388 CC2D2AQ9P2K1 1620 aa34.84■■■■□ 3.17
HDHD2-203ENST00000587388 CECR2Q9BXF3 1484 aa34.81■■■■□ 3.16
HDHD2-203ENST00000587388 EIF4G1Q04637 1599 aaKnown RBP34.74■■■■□ 3.15
HDHD2-203ENST00000587388 DNAJC5Q9H3Z4 198 aa33.65■■■□□ 2.98
HDHD2-203ENST00000587388 NCAPD3P42695 1498 aa33.63■■■□□ 2.97
HDHD2-203ENST00000587388 ATAD2BQ9ULI0 1458 aa33.45■■■□□ 2.95
HDHD2-203ENST00000587388 CUX2O14529 1486 aa33.42■■■□□ 2.94
HDHD2-203ENST00000587388 SMARCA2P51531 1590 aa33.38■■■□□ 2.93
HDHD2-203ENST00000587388 ERCC6Q03468 1493 aa33.37■■■□□ 2.93
HDHD2-203ENST00000587388 SMARCA4P51532 1647 aa33.34■■■□□ 2.93
HDHD2-203ENST00000587388 HMGXB3Q12766 1538 aa33.33■■■□□ 2.93
HDHD2-203ENST00000587388 BAZ1AQ9NRL2 1556 aaPredicted RBP33.18■■■□□ 2.9
HDHD2-203ENST00000587388 BAZ1BQ9UIG0 1483 aaKnown RBP33.12■■■□□ 2.89
HDHD2-203ENST00000587388 PEG3Q9GZU2 1588 aa33.06■■■□□ 2.88
HDHD2-203ENST00000587388 NESP48681 1621 aa33.06■■■□□ 2.88
HDHD2-203ENST00000587388 LAMC3Q9Y6N6 1575 aa32.88■■■□□ 2.85
HDHD2-203ENST00000587388 MROH2BQ7Z745 1585 aa32.87■■■□□ 2.85
HDHD2-203ENST00000587388 THOC2Q8NI27 1593 aaKnown RBP32.78■■■□□ 2.84
HDHD2-203ENST00000587388 PDS5BQ9NTI5 1447 aa32.73■■■□□ 2.83
HDHD2-203ENST00000587388 KIF21AQ7Z4S6 1674 aa32.61■■■□□ 2.81
HDHD2-203ENST00000587388 CADPSQ9ULU8 1353 aa32.58■■■□□ 2.81
HDHD2-203ENST00000587388 WIZO95785 1651 aa32.43■■■□□ 2.78
HDHD2-203ENST00000587388 MRC2Q9UBG0 1479 aa32.42■■■□□ 2.78
HDHD2-203ENST00000587388 WDR62O43379 1518 aa32.32■■■□□ 2.76
HDHD2-203ENST00000587388 CEP164Q9UPV0 1460 aa32.24■■■□□ 2.75
HDHD2-203ENST00000587388 FANCD2Q9BXW9 1451 aa32.18■■■□□ 2.74
HDHD2-203ENST00000587388 CFTRP13569 1480 aa32.16■■■□□ 2.74
HDHD2-203ENST00000587388 RSF1Q96T23 1441 aaPredicted RBP32.15■■■□□ 2.74
HDHD2-203ENST00000587388 TOP2AP11388 1531 aaKnown RBP32.06■■■□□ 2.72
HDHD2-203ENST00000587388 TRIM41Q8WV44 630 aa32■■■□□ 2.71
HDHD2-203ENST00000587388 URB2Q14146 1524 aaKnown RBP31.9■■■□□ 2.7
HDHD2-203ENST00000587388 OSCARQ8IYS5 282 aa31.88■■■□□ 2.69
HDHD2-203ENST00000587388 PRDM2Q13029 1718 aa31.75■■■□□ 2.67
HDHD2-203ENST00000587388 CCDC88BA6NC98 1476 aa31.7■■■□□ 2.66
HDHD2-203ENST00000587388 IFT140Q96RY7 1462 aa31.63■■■□□ 2.65
HDHD2-203ENST00000587388 ABCC8Q09428 1581 aa31.55■■■□□ 2.64
HDHD2-203ENST00000587388 TOPBP1Q92547 1522 aa31.54■■■□□ 2.64
HDHD2-203ENST00000587388 ZNF608Q9ULD9 1512 aaPredicted RBP31.53■■■□□ 2.64
HDHD2-203ENST00000587388 DNMBPQ6XZF7 1577 aa31.41■■■□□ 2.62
HDHD2-203ENST00000587388 RIMBP3CA6NJZ7 1639 aa31.38■■■□□ 2.61
HDHD2-203ENST00000587388 RIMBP3BA6NNM3 1639 aa31.38■■■□□ 2.61
HDHD2-203ENST00000587388 RIMBP3Q9UFD9 1639 aa31.38■■■□□ 2.61
HDHD2-203ENST00000587388 EIF4G3O43432 1585 aaKnown RBP31.34■■■□□ 2.61
HDHD2-203ENST00000587388 ARHGEF11O15085 1522 aa31.29■■■□□ 2.6
HDHD2-203ENST00000587388 TARBP1Q13395 1621 aaKnown RBP31.27■■■□□ 2.6
HDHD2-203ENST00000587388 AQRO60306 1485 aaKnown RBP eCLIP31.24■■■□□ 2.59
HDHD2-203ENST00000587388 POLA1P09884 1462 aaPredicted RBP31.2■■■□□ 2.58
HDHD2-203ENST00000587388 CHD1O14646 1710 aa31.12■■■□□ 2.57
HDHD2-203ENST00000587388 CYB5RLQ6IPT4 315 aa31.1■■■□□ 2.57
HDHD2-203ENST00000587388 SOGA1O94964 1423 aa31.09■■■□□ 2.57
HDHD2-203ENST00000587388 FBLN2P98095 1184 aa31.09■■■□□ 2.57
HDHD2-203ENST00000587388 RAD54L2Q9Y4B4 1467 aa31.06■■■□□ 2.56
HDHD2-203ENST00000587388 TDRD9Q8NDG6 1382 aaKnown RBP31.03■■■□□ 2.56
HDHD2-203ENST00000587388 WDR97A6NE52 1622 aa31.01■■■□□ 2.55
HDHD2-203ENST00000587388 FGD5Q6ZNL6 1462 aa30.96■■■□□ 2.55
HDHD2-203ENST00000587388 ARAP1Q96P48 1450 aa30.96■■■□□ 2.55
HDHD2-203ENST00000587388 SNAPC4Q5SXM2 1469 aa30.9■■■□□ 2.54
HDHD2-203ENST00000587388 CUX1P39880 1505 aa30.89■■■□□ 2.54
HDHD2-203ENST00000587388 CHMP7Q8WUX9 453 aaPredicted RBP30.88■■■□□ 2.53
HDHD2-203ENST00000587388 MAGI1Q96QZ7 1491 aaPredicted RBP30.88■■■□□ 2.53
HDHD2-203ENST00000587388 GRIN2BQ13224 1484 aa30.85■■■□□ 2.53
HDHD2-203ENST00000587388 TRHP20396 242 aaPredicted RBP30.82■■■□□ 2.52
HDHD2-203ENST00000587388 CLASP1Q7Z460 1538 aa30.82■■■□□ 2.52
HDHD2-203ENST00000587388 SYNJ1O43426 1573 aa30.81■■■□□ 2.52
HDHD2-203ENST00000587388 SYNJ2O15056 1496 aa30.76■■■□□ 2.52
HDHD2-203ENST00000587388 GAPVD1Q14C86 1478 aa30.7■■■□□ 2.5
HDHD2-203ENST00000587388 ABCA10Q8WWZ4 1543 aa30.64■■■□□ 2.5
HDHD2-203ENST00000587388 PBRM1Q86U86 1689 aa30.62■■■□□ 2.49
HDHD2-203ENST00000587388 ABCA5Q8WWZ7 1642 aa30.57■■■□□ 2.48
HDHD2-203ENST00000587388 SUPT5HO00267 1087 aaKnown RBP30.53■■■□□ 2.48
HDHD2-203ENST00000587388 WRNQ14191 1432 aaPredicted RBP eCLIP30.5■■■□□ 2.47
HDHD2-203ENST00000587388 GRIN2AQ12879 1464 aa30.43■■■□□ 2.46
HDHD2-203ENST00000587388 TOP2BQ02880 1626 aa30.36■■■□□ 2.45
HDHD2-203ENST00000587388 BIVM-ERCC5R4GMW8 1640 aa30.36■■■□□ 2.45
HDHD2-203ENST00000587388 NUP160Q12769 1436 aa30.35■■■□□ 2.45
HDHD2-203ENST00000587388 ADAMTS12P58397 1594 aa30.35■■■□□ 2.45
HDHD2-203ENST00000587388 FHAD1B1AJZ9 1412 aa30.32■■■□□ 2.44
HDHD2-203ENST00000587388 CEP170Q5SW79 1584 aa30.28■■■□□ 2.44
HDHD2-203ENST00000587388 ERICH3Q5RHP9 1530 aa30.27■■■□□ 2.44
HDHD2-203ENST00000587388 ERCC6L2Q5T890 1561 aa30.26■■■□□ 2.43
HDHD2-203ENST00000587388 SHROOM2Q13796 1616 aa30.22■■■□□ 2.43
HDHD2-203ENST00000587388 AEBP2Q6ZN18 517 aaPredicted RBP30.11■■■□□ 2.41
HDHD2-203ENST00000587388 PRG4Q92954 1404 aaPredicted RBP30.07■■■□□ 2.4
HDHD2-203ENST00000587388 JPH4Q96JJ6 628 aa30.07■■■□□ 2.4
HDHD2-203ENST00000587388 RUSC2Q8N2Y8 1516 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms