RNA–Protein interactions for RNA: ENST00000587207.1

TPGS2-205, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 3

Gene TPGS2, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-205ENST00000587207 NISCHQ9Y2I1 1504 aa57.78■■■■■ 6.84
TPGS2-205ENST00000587207 CCDC180Q9P1Z9 1646 aa51.52■■■■■ 5.84
TPGS2-205ENST00000587207 ABCC9O60706 1549 aa50.79■■■■■ 5.72
TPGS2-205ENST00000587207 RB1CC1Q8TDY2 1594 aa48.67■■■■■ 5.38
TPGS2-205ENST00000587207 NACADO15069 1562 aa48.53■■■■■ 5.36
TPGS2-205ENST00000587207 DCAF8L2P0C7V8 631 aa48.38■■■■■ 5.34
TPGS2-205ENST00000587207 MYO15BQ96JP2 1530 aa48.13■■■■■ 5.3
TPGS2-205ENST00000587207 ZCCHC6Q5VYS8 1495 aaKnown RBP48.05■■■■■ 5.28
TPGS2-205ENST00000587207 DCAF1Q9Y4B6 1507 aa47.78■■■■■ 5.24
TPGS2-205ENST00000587207 UNC13AQ9UPW8 1703 aa47.61■■■■■ 5.21
TPGS2-205ENST00000587207 PABPN1Q86U42 306 aaKnown RBP eCLIP47.4■■■■■ 5.18
TPGS2-205ENST00000587207 BICRAQ9NZM4 1560 aa47.27■■■■■ 5.16
TPGS2-205ENST00000587207 DNAJC5BQ9UF47 199 aa47.03■■■■■ 5.12
TPGS2-205ENST00000587207 SCRIBQ14160 1630 aa46.97■■■■■ 5.11
TPGS2-205ENST00000587207 SHROOM4Q9ULL8 1493 aa46.68■■■■■ 5.06
TPGS2-205ENST00000587207 EIF4G1Q04637 1599 aaKnown RBP46.02■■■■■ 4.96
TPGS2-205ENST00000587207 CC2D2AQ9P2K1 1620 aa45.93■■■■■ 4.94
TPGS2-205ENST00000587207 CECR2Q9BXF3 1484 aa45.67■■■■■ 4.9
TPGS2-205ENST00000587207 SMARCA4P51532 1647 aa44.91■■■■■ 4.78
TPGS2-205ENST00000587207 NCAPD3P42695 1498 aa44.81■■■■■ 4.76
TPGS2-205ENST00000587207 BAZ1AQ9NRL2 1556 aaPredicted RBP44.79■■■■■ 4.76
TPGS2-205ENST00000587207 ATAD2BQ9ULI0 1458 aa44.78■■■■■ 4.76
TPGS2-205ENST00000587207 SMARCA2P51531 1590 aa44.67■■■■■ 4.74
TPGS2-205ENST00000587207 MROH2BQ7Z745 1585 aa44.54■■■■■ 4.72
TPGS2-205ENST00000587207 HMGXB3Q12766 1538 aa44.53■■■■■ 4.72
TPGS2-205ENST00000587207 PEG3Q9GZU2 1588 aa44.49■■■■■ 4.71
TPGS2-205ENST00000587207 BAZ1BQ9UIG0 1483 aaKnown RBP44.35■■■■■ 4.69
TPGS2-205ENST00000587207 WIZO95785 1651 aa44.04■■■■■ 4.64
TPGS2-205ENST00000587207 RSF1Q96T23 1441 aaPredicted RBP43.89■■■■■ 4.62
TPGS2-205ENST00000587207 NESP48681 1621 aa43.86■■■■■ 4.61
TPGS2-205ENST00000587207 ERCC6Q03468 1493 aa43.76■■■■■ 4.6
TPGS2-205ENST00000587207 LAMC3Q9Y6N6 1575 aa43.67■■■■■ 4.58
TPGS2-205ENST00000587207 TOP2AP11388 1531 aaKnown RBP43.53■■■■■ 4.56
TPGS2-205ENST00000587207 CADPSQ9ULU8 1353 aa43.47■■■■■ 4.55
TPGS2-205ENST00000587207 CUX2O14529 1486 aa43.46■■■■■ 4.55
TPGS2-205ENST00000587207 PDS5BQ9NTI5 1447 aa43.37■■■■■ 4.53
TPGS2-205ENST00000587207 KIF21AQ7Z4S6 1674 aa43.31■■■■■ 4.52
TPGS2-205ENST00000587207 THOC2Q8NI27 1593 aaKnown RBP43.27■■■■■ 4.52
TPGS2-205ENST00000587207 CFTRP13569 1480 aa43.14■■■■■ 4.5
TPGS2-205ENST00000587207 CCDC88BA6NC98 1476 aa43.03■■■■■ 4.48
TPGS2-205ENST00000587207 FANCD2Q9BXW9 1451 aa42.97■■■■■ 4.47
TPGS2-205ENST00000587207 MRC2Q9UBG0 1479 aa42.96■■■■■ 4.47
TPGS2-205ENST00000587207 CEP164Q9UPV0 1460 aa42.94■■■■■ 4.46
TPGS2-205ENST00000587207 WDR62O43379 1518 aa42.85■■■■■ 4.45
TPGS2-205ENST00000587207 PRDM2Q13029 1718 aa42.76■■■■■ 4.44
TPGS2-205ENST00000587207 DNAJC5Q9H3Z4 198 aa42.61■■■■■ 4.41
TPGS2-205ENST00000587207 URB2Q14146 1524 aaKnown RBP42.59■■■■■ 4.41
TPGS2-205ENST00000587207 SUPT5HO00267 1087 aaKnown RBP42.45■■■■■ 4.39
TPGS2-205ENST00000587207 TOPBP1Q92547 1522 aa42.25■■■■■ 4.35
TPGS2-205ENST00000587207 ABCC8Q09428 1581 aa42.19■■■■■ 4.34
TPGS2-205ENST00000587207 DNMBPQ6XZF7 1577 aa42.15■■■■■ 4.34
TPGS2-205ENST00000587207 IFT140Q96RY7 1462 aa42.05■■■■■ 4.32
TPGS2-205ENST00000587207 ZNF608Q9ULD9 1512 aaPredicted RBP41.94■■■■■ 4.3
TPGS2-205ENST00000587207 POLA1P09884 1462 aaPredicted RBP41.86■■■■■ 4.29
TPGS2-205ENST00000587207 TARBP1Q13395 1621 aaKnown RBP41.83■■■■■ 4.29
TPGS2-205ENST00000587207 CUX1P39880 1505 aa41.8■■■■■ 4.28
TPGS2-205ENST00000587207 EIF4G3O43432 1585 aaKnown RBP41.73■■■■■ 4.27
TPGS2-205ENST00000587207 FGD5Q6ZNL6 1462 aa41.71■■■■■ 4.27
TPGS2-205ENST00000587207 RAD54L2Q9Y4B4 1467 aa41.7■■■■■ 4.27
TPGS2-205ENST00000587207 SOGA1O94964 1423 aa41.68■■■■■ 4.26
TPGS2-205ENST00000587207 AQRO60306 1485 aaKnown RBP eCLIP41.64■■■■■ 4.262e-6■□□□□ 11
TPGS2-205ENST00000587207 OSCARQ8IYS5 282 aa41.6■■■■■ 4.25
TPGS2-205ENST00000587207 TDRD9Q8NDG6 1382 aaKnown RBP41.5■■■■■ 4.23
TPGS2-205ENST00000587207 WDR97A6NE52 1622 aa41.44■■■■■ 4.22
TPGS2-205ENST00000587207 WRNQ14191 1432 aaPredicted RBP eCLIP41.36■■■■■ 4.21
TPGS2-205ENST00000587207 BIVM-ERCC5R4GMW8 1640 aa41.33■■■■■ 4.21
TPGS2-205ENST00000587207 TOP2BQ02880 1626 aa41.32■■■■■ 4.2
TPGS2-205ENST00000587207 SYNJ1O43426 1573 aa41.3■■■■■ 4.2
TPGS2-205ENST00000587207 CHD1O14646 1710 aa41.28■■■■■ 4.2
TPGS2-205ENST00000587207 ABCA10Q8WWZ4 1543 aa41.28■■■■■ 4.2
TPGS2-205ENST00000587207 SNAPC4Q5SXM2 1469 aa41.23■■■■■ 4.19
TPGS2-205ENST00000587207 GRIN2BQ13224 1484 aa41.22■■■■■ 4.19
TPGS2-205ENST00000587207 GAPVD1Q14C86 1478 aa41.18■■■■■ 4.18
TPGS2-205ENST00000587207 FBLN2P98095 1184 aa41.17■■■■■ 4.18
TPGS2-205ENST00000587207 ABCA5Q8WWZ7 1642 aa41.16■■■■■ 4.18
TPGS2-205ENST00000587207 MAGI1Q96QZ7 1491 aaPredicted RBP41.15■■■■■ 4.18
TPGS2-205ENST00000587207 PBRM1Q86U86 1689 aa41.12■■■■■ 4.17
TPGS2-205ENST00000587207 CHMP7Q8WUX9 453 aaPredicted RBP41.01■■■■■ 4.16
TPGS2-205ENST00000587207 TRIM41Q8WV44 630 aa41.01■■■■■ 4.16
TPGS2-205ENST00000587207 SYNJ2O15056 1496 aa41.01■■■■■ 4.16
TPGS2-205ENST00000587207 RIMBP3CA6NJZ7 1639 aa41■■■■■ 4.15
TPGS2-205ENST00000587207 RIMBP3BA6NNM3 1639 aa41■■■■■ 4.15
TPGS2-205ENST00000587207 RIMBP3Q9UFD9 1639 aa41■■■■■ 4.15
TPGS2-205ENST00000587207 ARHGEF11O15085 1522 aa40.94■■■■■ 4.14
TPGS2-205ENST00000587207 CLASP1Q7Z460 1538 aa40.84■■■■■ 4.13
TPGS2-205ENST00000587207 ADAMTS12P58397 1594 aa40.78■■■■■ 4.12
TPGS2-205ENST00000587207 ERICH3Q5RHP9 1530 aa40.77■■■■■ 4.12
TPGS2-205ENST00000587207 GRIN2AQ12879 1464 aa40.7■■■■■ 4.11
TPGS2-205ENST00000587207 FHAD1B1AJZ9 1412 aa40.69■■■■■ 4.1
TPGS2-205ENST00000587207 ARAP1Q96P48 1450 aa40.6■■■■■ 4.09
TPGS2-205ENST00000587207 CYB5RLQ6IPT4 315 aa40.57■■■■■ 4.09
TPGS2-205ENST00000587207 NUP160Q12769 1436 aa40.56■■■■■ 4.08
TPGS2-205ENST00000587207 CEP170Q5SW79 1584 aa40.53■■■■■ 4.08
TPGS2-205ENST00000587207 KIF27Q86VH2 1401 aa40.51■■■■■ 4.08
TPGS2-205ENST00000587207 IGF1RP08069 1367 aa40.44■■■■■ 4.06
TPGS2-205ENST00000587207 CUL7Q14999 1698 aa40.31■■■■■ 4.04
TPGS2-205ENST00000587207 SHROOM2Q13796 1616 aa40.3■■■■■ 4.04
TPGS2-205ENST00000587207 ERCC6L2Q5T890 1561 aa40.27■■■■■ 4.04
TPGS2-205ENST00000587207 RUSC2Q8N2Y8 1516 aa40.19■■■■■ 4.02
TPGS2-205ENST00000587207 CARMIL1Q5VZK9 1371 aa40.17■■■■■ 4.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms