RNA–Protein interactions for RNA: ENST00000587196.2

U2AF2-203, Transcript of U2 small nuclear RNA auxiliary factor 2, humanhuman

TSL 3

Gene U2AF2, Length 778 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2-203ENST00000587196 NISCHQ9Y2I1 1504 aa35.39■■■■□ 3.26
U2AF2-203ENST00000587196 ABCC9O60706 1549 aa31.78■■■□□ 2.68
U2AF2-203ENST00000587196 CCDC180Q9P1Z9 1646 aa31.64■■■□□ 2.65
U2AF2-203ENST00000587196 RB1CC1Q8TDY2 1594 aa30.2■■■□□ 2.42
U2AF2-203ENST00000587196 DCAF8L2P0C7V8 631 aa30.05■■■□□ 2.4
U2AF2-203ENST00000587196 NACADO15069 1562 aa30■■■□□ 2.39
U2AF2-203ENST00000587196 DNAJC5BQ9UF47 199 aa29.86■■■□□ 2.37
U2AF2-203ENST00000587196 PABPN1Q86U42 306 aaKnown RBP eCLIP29.68■■■□□ 2.34
U2AF2-203ENST00000587196 MYO15BQ96JP2 1530 aa29.58■■■□□ 2.33
U2AF2-203ENST00000587196 UNC13AQ9UPW8 1703 aa29.36■■■□□ 2.29
U2AF2-203ENST00000587196 ZCCHC6Q5VYS8 1495 aaKnown RBP29.31■■■□□ 2.28
U2AF2-203ENST00000587196 BICRAQ9NZM4 1560 aa29.29■■■□□ 2.28
U2AF2-203ENST00000587196 DCAF1Q9Y4B6 1507 aa29.21■■■□□ 2.27
U2AF2-203ENST00000587196 SHROOM4Q9ULL8 1493 aa28.91■■■□□ 2.22
U2AF2-203ENST00000587196 SCRIBQ14160 1630 aa28.91■■■□□ 2.22
U2AF2-203ENST00000587196 CC2D2AQ9P2K1 1620 aa28.64■■■□□ 2.18
U2AF2-203ENST00000587196 CECR2Q9BXF3 1484 aa28.63■■■□□ 2.17
U2AF2-203ENST00000587196 EIF4G1Q04637 1599 aaKnown RBP28.59■■■□□ 2.17
U2AF2-203ENST00000587196 NCAPD3P42695 1498 aa27.74■■■□□ 2.03
U2AF2-203ENST00000587196 ATAD2BQ9ULI0 1458 aa27.65■■■□□ 2.02
U2AF2-203ENST00000587196 SMARCA4P51532 1647 aa27.56■■■□□ 2
U2AF2-203ENST00000587196 SMARCA2P51531 1590 aa27.55■■■□□ 2
U2AF2-203ENST00000587196 HMGXB3Q12766 1538 aa27.47■■□□□ 1.99
U2AF2-203ENST00000587196 ERCC6Q03468 1493 aa27.46■■□□□ 1.99
U2AF2-203ENST00000587196 BAZ1AQ9NRL2 1556 aaPredicted RBP27.46■■□□□ 1.99
U2AF2-203ENST00000587196 DNAJC5Q9H3Z4 198 aa27.42■■□□□ 1.98
U2AF2-203ENST00000587196 BAZ1BQ9UIG0 1483 aaKnown RBP27.38■■□□□ 1.97
U2AF2-203ENST00000587196 CUX2O14529 1486 aa27.36■■□□□ 1.97
U2AF2-203ENST00000587196 NESP48681 1621 aa27.29■■□□□ 1.96
U2AF2-203ENST00000587196 PEG3Q9GZU2 1588 aa27.28■■□□□ 1.96
U2AF2-203ENST00000587196 MROH2BQ7Z745 1585 aa27.27■■□□□ 1.96
U2AF2-203ENST00000587196 LAMC3Q9Y6N6 1575 aa27.05■■□□□ 1.92
U2AF2-203ENST00000587196 PDS5BQ9NTI5 1447 aa26.99■■□□□ 1.91
U2AF2-203ENST00000587196 CADPSQ9ULU8 1353 aa26.94■■□□□ 1.9
U2AF2-203ENST00000587196 THOC2Q8NI27 1593 aaKnown RBP26.92■■□□□ 1.9
U2AF2-203ENST00000587196 WIZO95785 1651 aa26.9■■□□□ 1.9
U2AF2-203ENST00000587196 KIF21AQ7Z4S6 1674 aa26.82■■□□□ 1.88
U2AF2-203ENST00000587196 RSF1Q96T23 1441 aaPredicted RBP26.76■■□□□ 1.87
U2AF2-203ENST00000587196 MRC2Q9UBG0 1479 aa26.71■■□□□ 1.87
U2AF2-203ENST00000587196 CEP164Q9UPV0 1460 aa26.61■■□□□ 1.85
U2AF2-203ENST00000587196 FANCD2Q9BXW9 1451 aa26.6■■□□□ 1.85
U2AF2-203ENST00000587196 WDR62O43379 1518 aa26.6■■□□□ 1.85
U2AF2-203ENST00000587196 CFTRP13569 1480 aa26.59■■□□□ 1.85
U2AF2-203ENST00000587196 TOP2AP11388 1531 aaKnown RBP26.58■■□□□ 1.85
U2AF2-203ENST00000587196 URB2Q14146 1524 aaKnown RBP26.35■■□□□ 1.81
U2AF2-203ENST00000587196 CCDC88BA6NC98 1476 aa26.34■■□□□ 1.81
U2AF2-203ENST00000587196 TRIM41Q8WV44 630 aa26.26■■□□□ 1.79
U2AF2-203ENST00000587196 OSCARQ8IYS5 282 aa26.23■■□□□ 1.79
U2AF2-203ENST00000587196 PRDM2Q13029 1718 aa26.12■■□□□ 1.77
U2AF2-203ENST00000587196 IFT140Q96RY7 1462 aa26.1■■□□□ 1.77
U2AF2-203ENST00000587196 TOPBP1Q92547 1522 aa26.07■■□□□ 1.76
U2AF2-203ENST00000587196 ZNF608Q9ULD9 1512 aaPredicted RBP26.04■■□□□ 1.76
U2AF2-203ENST00000587196 ABCC8Q09428 1581 aa26.03■■□□□ 1.76
U2AF2-203ENST00000587196 DNMBPQ6XZF7 1577 aa25.95■■□□□ 1.74
U2AF2-203ENST00000587196 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.732e-10■■■■■ 41.5
U2AF2-203ENST00000587196 EIF4G3O43432 1585 aaKnown RBP25.82■■□□□ 1.72
U2AF2-203ENST00000587196 POLA1P09884 1462 aaPredicted RBP25.81■■□□□ 1.72
U2AF2-203ENST00000587196 TARBP1Q13395 1621 aaKnown RBP25.79■■□□□ 1.72
U2AF2-203ENST00000587196 FBLN2P98095 1184 aa25.76■■□□□ 1.71
U2AF2-203ENST00000587196 SOGA1O94964 1423 aa25.76■■□□□ 1.71
U2AF2-203ENST00000587196 RAD54L2Q9Y4B4 1467 aa25.75■■□□□ 1.71
U2AF2-203ENST00000587196 RIMBP3CA6NJZ7 1639 aa25.73■■□□□ 1.71
U2AF2-203ENST00000587196 RIMBP3BA6NNM3 1639 aa25.73■■□□□ 1.71
U2AF2-203ENST00000587196 RIMBP3Q9UFD9 1639 aa25.73■■□□□ 1.71
U2AF2-203ENST00000587196 TDRD9Q8NDG6 1382 aaKnown RBP25.71■■□□□ 1.71
U2AF2-203ENST00000587196 SUPT5HO00267 1087 aaKnown RBP25.69■■□□□ 1.7
U2AF2-203ENST00000587196 ARHGEF11O15085 1522 aa25.68■■□□□ 1.7
U2AF2-203ENST00000587196 FGD5Q6ZNL6 1462 aa25.66■■□□□ 1.7
U2AF2-203ENST00000587196 CYB5RLQ6IPT4 315 aa25.62■■□□□ 1.69
U2AF2-203ENST00000587196 CUX1P39880 1505 aa25.62■■□□□ 1.69
U2AF2-203ENST00000587196 CHD1O14646 1710 aa25.58■■□□□ 1.69
U2AF2-203ENST00000587196 CHMP7Q8WUX9 453 aaPredicted RBP25.56■■□□□ 1.68
U2AF2-203ENST00000587196 SNAPC4Q5SXM2 1469 aa25.54■■□□□ 1.68
U2AF2-203ENST00000587196 WDR97A6NE52 1622 aa25.51■■□□□ 1.67
U2AF2-203ENST00000587196 GRIN2BQ13224 1484 aa25.5■■□□□ 1.67
U2AF2-203ENST00000587196 MAGI1Q96QZ7 1491 aaPredicted RBP25.47■■□□□ 1.67
U2AF2-203ENST00000587196 ARAP1Q96P48 1450 aa25.44■■□□□ 1.66
U2AF2-203ENST00000587196 GAPVD1Q14C86 1478 aa25.41■■□□□ 1.66
U2AF2-203ENST00000587196 SYNJ2O15056 1496 aa25.4■■□□□ 1.66
U2AF2-203ENST00000587196 SYNJ1O43426 1573 aa25.36■■□□□ 1.65
U2AF2-203ENST00000587196 ABCA10Q8WWZ4 1543 aa25.36■■□□□ 1.65
U2AF2-203ENST00000587196 TRHP20396 242 aaPredicted RBP25.35■■□□□ 1.65
U2AF2-203ENST00000587196 CLASP1Q7Z460 1538 aa25.35■■□□□ 1.65
U2AF2-203ENST00000587196 WRNQ14191 1432 aaPredicted RBP eCLIP25.32■■□□□ 1.64
U2AF2-203ENST00000587196 ABCA5Q8WWZ7 1642 aa25.25■■□□□ 1.63
U2AF2-203ENST00000587196 PBRM1Q86U86 1689 aa25.25■■□□□ 1.63
U2AF2-203ENST00000587196 TOP2BQ02880 1626 aa25.18■■□□□ 1.62
U2AF2-203ENST00000587196 BIVM-ERCC5R4GMW8 1640 aa25.14■■□□□ 1.61
U2AF2-203ENST00000587196 GRIN2AQ12879 1464 aa25.14■■□□□ 1.61
U2AF2-203ENST00000587196 FHAD1B1AJZ9 1412 aa25.1■■□□□ 1.61
U2AF2-203ENST00000587196 ADAMTS12P58397 1594 aa25.07■■□□□ 1.6
U2AF2-203ENST00000587196 NUP160Q12769 1436 aa25.06■■□□□ 1.6
U2AF2-203ENST00000587196 ERICH3Q5RHP9 1530 aa25.02■■□□□ 1.6
U2AF2-203ENST00000587196 CEP170Q5SW79 1584 aa25.01■■□□□ 1.59
U2AF2-203ENST00000587196 ERCC6L2Q5T890 1561 aa24.98■■□□□ 1.59
U2AF2-203ENST00000587196 JPH4Q96JJ6 628 aa24.91■■□□□ 1.58
U2AF2-203ENST00000587196 PRG4Q92954 1404 aaPredicted RBP24.87■■□□□ 1.57
U2AF2-203ENST00000587196 SHROOM2Q13796 1616 aa24.86■■□□□ 1.57
U2AF2-203ENST00000587196 IGF1RP08069 1367 aa24.8■■□□□ 1.56
U2AF2-203ENST00000587196 KIF27Q86VH2 1401 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms