RNA–Protein interactions for RNA: ENST00000587167.1

SPHK1-204, Transcript of sphingosine kinase 1, humanhuman

TSL 4

Gene SPHK1, Length 456 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-204ENST00000587167 NISCHQ9Y2I1 1504 aa47.2■■■■■ 5.15
SPHK1-204ENST00000587167 CCDC180Q9P1Z9 1646 aa42.35■■■■■ 4.37
SPHK1-204ENST00000587167 ABCC9O60706 1549 aa42.17■■■■■ 4.34
SPHK1-204ENST00000587167 RB1CC1Q8TDY2 1594 aa40.22■■■■■ 4.03
SPHK1-204ENST00000587167 NACADO15069 1562 aa39.99■■■■□ 3.99
SPHK1-204ENST00000587167 DCAF8L2P0C7V8 631 aa39.64■■■■□ 3.94
SPHK1-204ENST00000587167 DNAJC5BQ9UF47 199 aa39.53■■■■□ 3.92
SPHK1-204ENST00000587167 MYO15BQ96JP2 1530 aa39.51■■■■□ 3.92
SPHK1-204ENST00000587167 UNC13AQ9UPW8 1703 aa39.4■■■■□ 3.9
SPHK1-204ENST00000587167 PABPN1Q86U42 306 aaKnown RBP eCLIP39.25■■■■□ 3.871e-7■□□□□ 10.2
SPHK1-204ENST00000587167 ZCCHC6Q5VYS8 1495 aaKnown RBP39.13■■■■□ 3.85
SPHK1-204ENST00000587167 BICRAQ9NZM4 1560 aa39.1■■■■□ 3.85
SPHK1-204ENST00000587167 DCAF1Q9Y4B6 1507 aa39.04■■■■□ 3.84
SPHK1-204ENST00000587167 SHROOM4Q9ULL8 1493 aa38.56■■■■□ 3.76
SPHK1-204ENST00000587167 SCRIBQ14160 1630 aa38.52■■■■□ 3.76
SPHK1-204ENST00000587167 CC2D2AQ9P2K1 1620 aa38.15■■■■□ 3.7
SPHK1-204ENST00000587167 EIF4G1Q04637 1599 aaKnown RBP38.09■■■■□ 3.69
SPHK1-204ENST00000587167 CECR2Q9BXF3 1484 aa37.99■■■■□ 3.67
SPHK1-204ENST00000587167 NCAPD3P42695 1498 aa36.92■■■■□ 3.5
SPHK1-204ENST00000587167 ATAD2BQ9ULI0 1458 aa36.81■■■■□ 3.48
SPHK1-204ENST00000587167 SMARCA4P51532 1647 aa36.8■■■■□ 3.48
SPHK1-204ENST00000587167 SMARCA2P51531 1590 aa36.69■■■■□ 3.46
SPHK1-204ENST00000587167 HMGXB3Q12766 1538 aa36.64■■■■□ 3.46
SPHK1-204ENST00000587167 BAZ1AQ9NRL2 1556 aaPredicted RBP36.61■■■■□ 3.45
SPHK1-204ENST00000587167 PEG3Q9GZU2 1588 aa36.49■■■■□ 3.43
SPHK1-204ENST00000587167 BAZ1BQ9UIG0 1483 aaKnown RBP36.41■■■■□ 3.42
SPHK1-204ENST00000587167 MROH2BQ7Z745 1585 aa36.36■■■■□ 3.41
SPHK1-204ENST00000587167 ERCC6Q03468 1493 aa36.36■■■■□ 3.41
SPHK1-204ENST00000587167 CUX2O14529 1486 aa36.34■■■■□ 3.41
SPHK1-204ENST00000587167 NESP48681 1621 aa36.28■■■■□ 3.4
SPHK1-204ENST00000587167 DNAJC5Q9H3Z4 198 aa36.22■■■■□ 3.39
SPHK1-204ENST00000587167 LAMC3Q9Y6N6 1575 aa36.06■■■■□ 3.36
SPHK1-204ENST00000587167 WIZO95785 1651 aa35.94■■■■□ 3.34
SPHK1-204ENST00000587167 THOC2Q8NI27 1593 aaKnown RBP35.93■■■■□ 3.34
SPHK1-204ENST00000587167 KIF21AQ7Z4S6 1674 aa35.84■■■■□ 3.33
SPHK1-204ENST00000587167 PDS5BQ9NTI5 1447 aa35.81■■■■□ 3.32
SPHK1-204ENST00000587167 RSF1Q96T23 1441 aaPredicted RBP35.78■■■■□ 3.32
SPHK1-204ENST00000587167 CADPSQ9ULU8 1353 aa35.77■■■■□ 3.32
SPHK1-204ENST00000587167 MRC2Q9UBG0 1479 aa35.51■■■■□ 3.28
SPHK1-204ENST00000587167 TOP2AP11388 1531 aaKnown RBP35.47■■■■□ 3.27
SPHK1-204ENST00000587167 WDR62O43379 1518 aa35.45■■■■□ 3.27
SPHK1-204ENST00000587167 CFTRP13569 1480 aa35.41■■■■□ 3.26
SPHK1-204ENST00000587167 CEP164Q9UPV0 1460 aa35.37■■■■□ 3.25
SPHK1-204ENST00000587167 FANCD2Q9BXW9 1451 aa35.35■■■■□ 3.25
SPHK1-204ENST00000587167 SUPT5HO00267 1087 aaKnown RBP35.2■■■■□ 3.23
SPHK1-204ENST00000587167 PRDM2Q13029 1718 aa35.11■■■■□ 3.21
SPHK1-204ENST00000587167 URB2Q14146 1524 aaKnown RBP35.08■■■■□ 3.21
SPHK1-204ENST00000587167 CCDC88BA6NC98 1476 aa35.07■■■■□ 3.2
SPHK1-204ENST00000587167 TOPBP1Q92547 1522 aa34.71■■■■□ 3.15
SPHK1-204ENST00000587167 IFT140Q96RY7 1462 aa34.68■■■■□ 3.14
SPHK1-204ENST00000587167 OSCARQ8IYS5 282 aa34.66■■■■□ 3.14
SPHK1-204ENST00000587167 ABCC8Q09428 1581 aa34.64■■■■□ 3.14
SPHK1-204ENST00000587167 ZNF608Q9ULD9 1512 aaPredicted RBP34.62■■■■□ 3.13
SPHK1-204ENST00000587167 DNMBPQ6XZF7 1577 aa34.6■■■■□ 3.13
SPHK1-204ENST00000587167 TRIM41Q8WV44 630 aa34.56■■■■□ 3.12
SPHK1-204ENST00000587167 EIF4G3O43432 1585 aaKnown RBP34.45■■■■□ 3.1
SPHK1-204ENST00000587167 TARBP1Q13395 1621 aaKnown RBP34.44■■■■□ 3.1
SPHK1-204ENST00000587167 POLA1P09884 1462 aaPredicted RBP34.35■■■■□ 3.09
SPHK1-204ENST00000587167 AQRO60306 1485 aaKnown RBP eCLIP34.3■■■■□ 3.081e-65■■■■■ 89.5
SPHK1-204ENST00000587167 RIMBP3CA6NJZ7 1639 aa34.25■■■■□ 3.07
SPHK1-204ENST00000587167 RIMBP3BA6NNM3 1639 aa34.25■■■■□ 3.07
SPHK1-204ENST00000587167 RIMBP3Q9UFD9 1639 aa34.25■■■■□ 3.07
SPHK1-204ENST00000587167 RAD54L2Q9Y4B4 1467 aa34.21■■■■□ 3.07
SPHK1-204ENST00000587167 CHD1O14646 1710 aa34.19■■■■□ 3.06
SPHK1-204ENST00000587167 SOGA1O94964 1423 aa34.19■■■■□ 3.06
SPHK1-204ENST00000587167 CUX1P39880 1505 aa34.15■■■■□ 3.06
SPHK1-204ENST00000587167 FGD5Q6ZNL6 1462 aa34.14■■■■□ 3.06
SPHK1-204ENST00000587167 ARHGEF11O15085 1522 aa34.13■■■■□ 3.05
SPHK1-204ENST00000587167 WDR97A6NE52 1622 aa34.09■■■■□ 3.05
SPHK1-204ENST00000587167 TDRD9Q8NDG6 1382 aaKnown RBP34.09■■■■□ 3.05
SPHK1-204ENST00000587167 FBLN2P98095 1184 aa33.96■■■■□ 3.03
SPHK1-204ENST00000587167 SNAPC4Q5SXM2 1469 aa33.95■■■■□ 3.03
SPHK1-204ENST00000587167 MAGI1Q96QZ7 1491 aaPredicted RBP33.89■■■■□ 3.02
SPHK1-204ENST00000587167 GRIN2BQ13224 1484 aa33.88■■■■□ 3.01
SPHK1-204ENST00000587167 CLASP1Q7Z460 1538 aa33.82■■■■□ 3
SPHK1-204ENST00000587167 ARAP1Q96P48 1450 aa33.82■■■■□ 3
SPHK1-204ENST00000587167 CYB5RLQ6IPT4 315 aa33.81■■■■□ 3
SPHK1-204ENST00000587167 PBRM1Q86U86 1689 aa33.8■■■■□ 3
SPHK1-204ENST00000587167 ABCA10Q8WWZ4 1543 aa33.79■■■■□ 3
SPHK1-204ENST00000587167 GAPVD1Q14C86 1478 aa33.77■■■■□ 3
SPHK1-204ENST00000587167 CHMP7Q8WUX9 453 aaPredicted RBP33.77■■■■□ 3
SPHK1-204ENST00000587167 SYNJ2O15056 1496 aa33.76■■■■□ 3
SPHK1-204ENST00000587167 SYNJ1O43426 1573 aa33.75■■■□□ 2.99
SPHK1-204ENST00000587167 ABCA5Q8WWZ7 1642 aa33.75■■■□□ 2.99
SPHK1-204ENST00000587167 WRNQ14191 1432 aaPredicted RBP eCLIP33.73■■■□□ 2.99
SPHK1-204ENST00000587167 BIVM-ERCC5R4GMW8 1640 aa33.71■■■□□ 2.99
SPHK1-204ENST00000587167 TOP2BQ02880 1626 aa33.68■■■□□ 2.98
SPHK1-204ENST00000587167 ADAMTS12P58397 1594 aa33.47■■■□□ 2.95
SPHK1-204ENST00000587167 GRIN2AQ12879 1464 aa33.45■■■□□ 2.95
SPHK1-204ENST00000587167 ERICH3Q5RHP9 1530 aa33.37■■■□□ 2.93
SPHK1-204ENST00000587167 NUP160Q12769 1436 aa33.36■■■□□ 2.93
SPHK1-204ENST00000587167 TRHP20396 242 aaPredicted RBP33.36■■■□□ 2.93
SPHK1-204ENST00000587167 FHAD1B1AJZ9 1412 aa33.36■■■□□ 2.93
SPHK1-204ENST00000587167 CEP170Q5SW79 1584 aa33.35■■■□□ 2.93
SPHK1-204ENST00000587167 ERCC6L2Q5T890 1561 aa33.28■■■□□ 2.92
SPHK1-204ENST00000587167 SHROOM2Q13796 1616 aa33.24■■■□□ 2.91
SPHK1-204ENST00000587167 CHIC1Q5VXU3 224 aa33.05■■■□□ 2.88
SPHK1-204ENST00000587167 KIF27Q86VH2 1401 aa33■■■□□ 2.87
SPHK1-204ENST00000587167 RUSC2Q8N2Y8 1516 aa32.99■■■□□ 2.87
SPHK1-204ENST00000587167 JPH4Q96JJ6 628 aa32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms