RNA–Protein interactions for RNA: ENST00000587159.5

RANBP3-207, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-207ENST00000587159 NISCHQ9Y2I1 1504 aa26.48■■□□□ 1.83
RANBP3-207ENST00000587159 ABCC9O60706 1549 aa23.87■■□□□ 1.41
RANBP3-207ENST00000587159 CCDC180Q9P1Z9 1646 aa23.77■■□□□ 1.4
RANBP3-207ENST00000587159 RB1CC1Q8TDY2 1594 aa22.66■■□□□ 1.22
RANBP3-207ENST00000587159 NACADO15069 1562 aa22.48■■□□□ 1.19
RANBP3-207ENST00000587159 DNAJC5BQ9UF47 199 aa22.4■■□□□ 1.18
RANBP3-207ENST00000587159 DCAF8L2P0C7V8 631 aa22.32■■□□□ 1.16
RANBP3-207ENST00000587159 PABPN1Q86U42 306 aaKnown RBP eCLIP22.19■■□□□ 1.14
RANBP3-207ENST00000587159 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
RANBP3-207ENST00000587159 UNC13AQ9UPW8 1703 aa22.11■■□□□ 1.13
RANBP3-207ENST00000587159 BICRAQ9NZM4 1560 aa22.02■■□□□ 1.12
RANBP3-207ENST00000587159 ZCCHC6Q5VYS8 1495 aaKnown RBP21.98■■□□□ 1.11
RANBP3-207ENST00000587159 DCAF1Q9Y4B6 1507 aa21.85■■□□□ 1.09
RANBP3-207ENST00000587159 SHROOM4Q9ULL8 1493 aa21.72■■□□□ 1.07
RANBP3-207ENST00000587159 SCRIBQ14160 1630 aa21.71■■□□□ 1.07
RANBP3-207ENST00000587159 CC2D2AQ9P2K1 1620 aa21.53■■□□□ 1.04
RANBP3-207ENST00000587159 CECR2Q9BXF3 1484 aa21.5■■□□□ 1.03
RANBP3-207ENST00000587159 EIF4G1Q04637 1599 aaKnown RBP21.49■■□□□ 1.03
RANBP3-207ENST00000587159 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
RANBP3-207ENST00000587159 ATAD2BQ9ULI0 1458 aa20.71■□□□□ 0.91
RANBP3-207ENST00000587159 SMARCA4P51532 1647 aa20.68■□□□□ 0.9
RANBP3-207ENST00000587159 SMARCA2P51531 1590 aa20.64■□□□□ 0.9
RANBP3-207ENST00000587159 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
RANBP3-207ENST00000587159 ERCC6Q03468 1493 aa20.61■□□□□ 0.89
RANBP3-207ENST00000587159 CUX2O14529 1486 aa20.57■□□□□ 0.88
RANBP3-207ENST00000587159 DNAJC5Q9H3Z4 198 aa20.57■□□□□ 0.88
RANBP3-207ENST00000587159 BAZ1AQ9NRL2 1556 aaPredicted RBP20.55■□□□□ 0.88
RANBP3-207ENST00000587159 BAZ1BQ9UIG0 1483 aaKnown RBP20.52■□□□□ 0.88
RANBP3-207ENST00000587159 NESP48681 1621 aa20.49■□□□□ 0.87
RANBP3-207ENST00000587159 PEG3Q9GZU2 1588 aa20.47■□□□□ 0.87
RANBP3-207ENST00000587159 MROH2BQ7Z745 1585 aa20.42■□□□□ 0.86
RANBP3-207ENST00000587159 THOC2Q8NI27 1593 aaKnown RBP20.3■□□□□ 0.84
RANBP3-207ENST00000587159 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
RANBP3-207ENST00000587159 KIF21AQ7Z4S6 1674 aa20.19■□□□□ 0.82
RANBP3-207ENST00000587159 PDS5BQ9NTI5 1447 aa20.18■□□□□ 0.82
RANBP3-207ENST00000587159 WIZO95785 1651 aa20.15■□□□□ 0.82
RANBP3-207ENST00000587159 CADPSQ9ULU8 1353 aa20.13■□□□□ 0.81
RANBP3-207ENST00000587159 MRC2Q9UBG0 1479 aa20.05■□□□□ 0.8
RANBP3-207ENST00000587159 WDR62O43379 1518 aa20.01■□□□□ 0.79
RANBP3-207ENST00000587159 RSF1Q96T23 1441 aaPredicted RBP19.97■□□□□ 0.79
RANBP3-207ENST00000587159 CEP164Q9UPV0 1460 aa19.96■□□□□ 0.79
RANBP3-207ENST00000587159 FANCD2Q9BXW9 1451 aa19.93■□□□□ 0.78
RANBP3-207ENST00000587159 TOP2AP11388 1531 aaKnown RBP19.92■□□□□ 0.78
RANBP3-207ENST00000587159 CFTRP13569 1480 aa19.91■□□□□ 0.78
RANBP3-207ENST00000587159 URB2Q14146 1524 aaKnown RBP19.78■□□□□ 0.76
RANBP3-207ENST00000587159 TRIM41Q8WV44 630 aa19.69■□□□□ 0.74
RANBP3-207ENST00000587159 CCDC88BA6NC98 1476 aa19.67■□□□□ 0.74
RANBP3-207ENST00000587159 PRDM2Q13029 1718 aa19.65■□□□□ 0.74
RANBP3-207ENST00000587159 OSCARQ8IYS5 282 aa19.56■□□□□ 0.72
RANBP3-207ENST00000587159 IFT140Q96RY7 1462 aa19.55■□□□□ 0.72
RANBP3-207ENST00000587159 TOPBP1Q92547 1522 aa19.55■□□□□ 0.72
RANBP3-207ENST00000587159 ZNF608Q9ULD9 1512 aaPredicted RBP19.55■□□□□ 0.72
RANBP3-207ENST00000587159 DNMBPQ6XZF7 1577 aa19.46■□□□□ 0.71
RANBP3-207ENST00000587159 EIF4G3O43432 1585 aaKnown RBP19.44■□□□□ 0.7
RANBP3-207ENST00000587159 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
RANBP3-207ENST00000587159 RIMBP3CA6NJZ7 1639 aa19.38■□□□□ 0.69
RANBP3-207ENST00000587159 RIMBP3BA6NNM3 1639 aa19.38■□□□□ 0.69
RANBP3-207ENST00000587159 RIMBP3Q9UFD9 1639 aa19.38■□□□□ 0.69
RANBP3-207ENST00000587159 TARBP1Q13395 1621 aaKnown RBP19.36■□□□□ 0.69
RANBP3-207ENST00000587159 POLA1P09884 1462 aaPredicted RBP19.35■□□□□ 0.69
RANBP3-207ENST00000587159 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
RANBP3-207ENST00000587159 AQRO60306 1485 aaKnown RBP eCLIP19.34■□□□□ 0.697e-8■■■■□ 25.8
RANBP3-207ENST00000587159 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
RANBP3-207ENST00000587159 CHD1O14646 1710 aa19.26■□□□□ 0.67
RANBP3-207ENST00000587159 FGD5Q6ZNL6 1462 aa19.22■□□□□ 0.67
RANBP3-207ENST00000587159 TDRD9Q8NDG6 1382 aaKnown RBP19.21■□□□□ 0.67
RANBP3-207ENST00000587159 SOGA1O94964 1423 aa19.21■□□□□ 0.67
RANBP3-207ENST00000587159 CUX1P39880 1505 aa19.2■□□□□ 0.66
RANBP3-207ENST00000587159 FBLN2P98095 1184 aa19.19■□□□□ 0.66
RANBP3-207ENST00000587159 SNAPC4Q5SXM2 1469 aa19.17■□□□□ 0.66
RANBP3-207ENST00000587159 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
RANBP3-207ENST00000587159 WDR97A6NE52 1622 aa19.14■□□□□ 0.66
RANBP3-207ENST00000587159 CYB5RLQ6IPT4 315 aa19.13■□□□□ 0.65
RANBP3-207ENST00000587159 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
RANBP3-207ENST00000587159 GRIN2BQ13224 1484 aa19.09■□□□□ 0.65
RANBP3-207ENST00000587159 CLASP1Q7Z460 1538 aa19.08■□□□□ 0.64
RANBP3-207ENST00000587159 SYNJ1O43426 1573 aa19.04■□□□□ 0.64
RANBP3-207ENST00000587159 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
RANBP3-207ENST00000587159 CHMP7Q8WUX9 453 aaPredicted RBP19.03■□□□□ 0.64
RANBP3-207ENST00000587159 SUPT5HO00267 1087 aaKnown RBP19.02■□□□□ 0.64
RANBP3-207ENST00000587159 GAPVD1Q14C86 1478 aa19■□□□□ 0.63
RANBP3-207ENST00000587159 ABCA10Q8WWZ4 1543 aa18.99■□□□□ 0.63
RANBP3-207ENST00000587159 PBRM1Q86U86 1689 aa18.98■□□□□ 0.63
RANBP3-207ENST00000587159 ABCA5Q8WWZ7 1642 aa18.98■□□□□ 0.63
RANBP3-207ENST00000587159 TRHP20396 242 aaPredicted RBP18.94■□□□□ 0.62
RANBP3-207ENST00000587159 WRNQ14191 1432 aaPredicted RBP eCLIP18.89■□□□□ 0.615e-6■■■■■ 29.2
RANBP3-207ENST00000587159 ADAMTS12P58397 1594 aa18.86■□□□□ 0.61
RANBP3-207ENST00000587159 GRIN2AQ12879 1464 aa18.85■□□□□ 0.61
RANBP3-207ENST00000587159 TOP2BQ02880 1626 aa18.85■□□□□ 0.61
RANBP3-207ENST00000587159 BIVM-ERCC5R4GMW8 1640 aa18.85■□□□□ 0.61
RANBP3-207ENST00000587159 NUP160Q12769 1436 aa18.8■□□□□ 0.6
RANBP3-207ENST00000587159 CEP170Q5SW79 1584 aa18.8■□□□□ 0.6
RANBP3-207ENST00000587159 ERCC6L2Q5T890 1561 aa18.79■□□□□ 0.6
RANBP3-207ENST00000587159 FHAD1B1AJZ9 1412 aa18.76■□□□□ 0.59
RANBP3-207ENST00000587159 ERICH3Q5RHP9 1530 aa18.74■□□□□ 0.59
RANBP3-207ENST00000587159 SHROOM2Q13796 1616 aa18.7■□□□□ 0.58
RANBP3-207ENST00000587159 RUSC2Q8N2Y8 1516 aa18.6■□□□□ 0.57
RANBP3-207ENST00000587159 PRG4Q92954 1404 aaPredicted RBP18.6■□□□□ 0.57
RANBP3-207ENST00000587159 JPH4Q96JJ6 628 aa18.53■□□□□ 0.56
RANBP3-207ENST00000587159 KIF27Q86VH2 1401 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms