RNA–Protein interactions for RNA: ENST00000587136.1

PTBP1-212, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-212ENST00000587136 NISCHQ9Y2I1 1504 aa51.28■■■■■ 5.8
PTBP1-212ENST00000587136 CCDC180Q9P1Z9 1646 aa45.72■■■■■ 4.91
PTBP1-212ENST00000587136 ABCC9O60706 1549 aa44.68■■■■■ 4.74
PTBP1-212ENST00000587136 RB1CC1Q8TDY2 1594 aa43.02■■■■■ 4.48
PTBP1-212ENST00000587136 NACADO15069 1562 aa42.94■■■■■ 4.46
PTBP1-212ENST00000587136 DCAF8L2P0C7V8 631 aa42.85■■■■■ 4.45
PTBP1-212ENST00000587136 ZCCHC6Q5VYS8 1495 aaKnown RBP42.71■■■■■ 4.43
PTBP1-212ENST00000587136 MYO15BQ96JP2 1530 aa42.64■■■■■ 4.42
PTBP1-212ENST00000587136 DCAF1Q9Y4B6 1507 aa42.44■■■■■ 4.38
PTBP1-212ENST00000587136 UNC13AQ9UPW8 1703 aa42.15■■■■■ 4.34
PTBP1-212ENST00000587136 PABPN1Q86U42 306 aaKnown RBP eCLIP41.7■■■■■ 4.27
PTBP1-212ENST00000587136 BICRAQ9NZM4 1560 aa41.68■■■■■ 4.26
PTBP1-212ENST00000587136 SCRIBQ14160 1630 aa41.66■■■■■ 4.26
PTBP1-212ENST00000587136 SHROOM4Q9ULL8 1493 aa41.24■■■■■ 4.19
PTBP1-212ENST00000587136 DNAJC5BQ9UF47 199 aa40.98■■■■■ 4.15
PTBP1-212ENST00000587136 EIF4G1Q04637 1599 aaKnown RBP40.59■■■■■ 4.09
PTBP1-212ENST00000587136 CC2D2AQ9P2K1 1620 aa40.45■■■■■ 4.07
PTBP1-212ENST00000587136 CECR2Q9BXF3 1484 aa40.14■■■■■ 4.02
PTBP1-212ENST00000587136 SMARCA4P51532 1647 aa39.85■■■■□ 3.97
PTBP1-212ENST00000587136 BAZ1AQ9NRL2 1556 aaPredicted RBP39.79■■■■□ 3.96
PTBP1-212ENST00000587136 SMARCA2P51531 1590 aa39.59■■■■□ 3.93
PTBP1-212ENST00000587136 ATAD2BQ9ULI0 1458 aa39.58■■■■□ 3.93
PTBP1-212ENST00000587136 NCAPD3P42695 1498 aa39.56■■■■□ 3.92
PTBP1-212ENST00000587136 MROH2BQ7Z745 1585 aa39.52■■■■□ 3.92
PTBP1-212ENST00000587136 PEG3Q9GZU2 1588 aa39.44■■■■□ 3.9
PTBP1-212ENST00000587136 HMGXB3Q12766 1538 aa39.41■■■■□ 3.9
PTBP1-212ENST00000587136 BAZ1BQ9UIG0 1483 aaKnown RBP39.29■■■■□ 3.88
PTBP1-212ENST00000587136 WIZO95785 1651 aa39.16■■■■□ 3.86
PTBP1-212ENST00000587136 RSF1Q96T23 1441 aaPredicted RBP39.02■■■■□ 3.84
PTBP1-212ENST00000587136 TOP2AP11388 1531 aaKnown RBP38.7■■■■□ 3.79
PTBP1-212ENST00000587136 NESP48681 1621 aa38.65■■■■□ 3.78
PTBP1-212ENST00000587136 LAMC3Q9Y6N6 1575 aa38.6■■■■□ 3.77
PTBP1-212ENST00000587136 ERCC6Q03468 1493 aa38.54■■■■□ 3.76
PTBP1-212ENST00000587136 CADPSQ9ULU8 1353 aa38.4■■■■□ 3.74
PTBP1-212ENST00000587136 KIF21AQ7Z4S6 1674 aa38.3■■■■□ 3.72
PTBP1-212ENST00000587136 PDS5BQ9NTI5 1447 aa38.29■■■■□ 3.72
PTBP1-212ENST00000587136 CCDC88BA6NC98 1476 aa38.22■■■■□ 3.71
PTBP1-212ENST00000587136 CFTRP13569 1480 aa38.18■■■■□ 3.7
PTBP1-212ENST00000587136 CUX2O14529 1486 aa38.14■■■■□ 3.7
PTBP1-212ENST00000587136 THOC2Q8NI27 1593 aaKnown RBP38.12■■■■□ 3.69
PTBP1-212ENST00000587136 PRDM2Q13029 1718 aa38.08■■■■□ 3.69
PTBP1-212ENST00000587136 SUPT5HO00267 1087 aaKnown RBP38.01■■■■□ 3.68
PTBP1-212ENST00000587136 FANCD2Q9BXW9 1451 aa37.99■■■■□ 3.67
PTBP1-212ENST00000587136 CEP164Q9UPV0 1460 aa37.96■■■■□ 3.67
PTBP1-212ENST00000587136 MRC2Q9UBG0 1479 aa37.91■■■■□ 3.66
PTBP1-212ENST00000587136 WDR62O43379 1518 aa37.8■■■■□ 3.64
PTBP1-212ENST00000587136 URB2Q14146 1524 aaKnown RBP37.61■■■■□ 3.61
PTBP1-212ENST00000587136 ABCC8Q09428 1581 aa37.4■■■■□ 3.58
PTBP1-212ENST00000587136 TOPBP1Q92547 1522 aa37.39■■■■□ 3.58
PTBP1-212ENST00000587136 DNMBPQ6XZF7 1577 aa37.37■■■■□ 3.57
PTBP1-212ENST00000587136 IFT140Q96RY7 1462 aa37.16■■■■□ 3.54
PTBP1-212ENST00000587136 CUX1P39880 1505 aa37.08■■■■□ 3.53
PTBP1-212ENST00000587136 POLA1P09884 1462 aaPredicted RBP37.06■■■■□ 3.52
PTBP1-212ENST00000587136 TARBP1Q13395 1621 aaKnown RBP37.01■■■■□ 3.52
PTBP1-212ENST00000587136 DNAJC5Q9H3Z4 198 aa36.98■■■■□ 3.51
PTBP1-212ENST00000587136 ZNF608Q9ULD9 1512 aaPredicted RBP36.98■■■■□ 3.51
PTBP1-212ENST00000587136 FGD5Q6ZNL6 1462 aa36.97■■■■□ 3.51
PTBP1-212ENST00000587136 SOGA1O94964 1423 aa36.9■■■■□ 3.5
PTBP1-212ENST00000587136 EIF4G3O43432 1585 aaKnown RBP36.9■■■■□ 3.5
PTBP1-212ENST00000587136 RAD54L2Q9Y4B4 1467 aa36.88■■■■□ 3.5
PTBP1-212ENST00000587136 WRNQ14191 1432 aaPredicted RBP eCLIP36.83■■■■□ 3.49
PTBP1-212ENST00000587136 BIVM-ERCC5R4GMW8 1640 aa36.82■■■■□ 3.49
PTBP1-212ENST00000587136 TOP2BQ02880 1626 aa36.79■■■■□ 3.48
PTBP1-212ENST00000587136 SYNJ1O43426 1573 aa36.76■■■■□ 3.48
PTBP1-212ENST00000587136 AQRO60306 1485 aaKnown RBP eCLIP36.75■■■■□ 3.471e-19■■■■■ 46.6
PTBP1-212ENST00000587136 WDR97A6NE52 1622 aa36.74■■■■□ 3.47
PTBP1-212ENST00000587136 TDRD9Q8NDG6 1382 aaKnown RBP36.68■■■■□ 3.46
PTBP1-212ENST00000587136 ABCA10Q8WWZ4 1543 aa36.6■■■■□ 3.45
PTBP1-212ENST00000587136 OSCARQ8IYS5 282 aa36.53■■■■□ 3.44
PTBP1-212ENST00000587136 PBRM1Q86U86 1689 aa36.52■■■■□ 3.44
PTBP1-212ENST00000587136 ABCA5Q8WWZ7 1642 aa36.51■■■■□ 3.43
PTBP1-212ENST00000587136 CHD1O14646 1710 aa36.51■■■■□ 3.43
PTBP1-212ENST00000587136 GRIN2BQ13224 1484 aa36.49■■■■□ 3.43
PTBP1-212ENST00000587136 GAPVD1Q14C86 1478 aa36.49■■■■□ 3.43
PTBP1-212ENST00000587136 SNAPC4Q5SXM2 1469 aa36.44■■■■□ 3.42
PTBP1-212ENST00000587136 MAGI1Q96QZ7 1491 aaPredicted RBP36.41■■■■□ 3.42
PTBP1-212ENST00000587136 FBLN2P98095 1184 aa36.34■■■■□ 3.41
PTBP1-212ENST00000587136 SYNJ2O15056 1496 aa36.25■■■■□ 3.39
PTBP1-212ENST00000587136 CHMP7Q8WUX9 453 aaPredicted RBP36.23■■■■□ 3.39
PTBP1-212ENST00000587136 ERICH3Q5RHP9 1530 aa36.18■■■■□ 3.38
PTBP1-212ENST00000587136 ADAMTS12P58397 1594 aa36.15■■■■□ 3.38
PTBP1-212ENST00000587136 FHAD1B1AJZ9 1412 aa36.06■■■■□ 3.36
PTBP1-212ENST00000587136 KIF27Q86VH2 1401 aa36.06■■■■□ 3.36
PTBP1-212ENST00000587136 GRIN2AQ12879 1464 aa36.02■■■■□ 3.36
PTBP1-212ENST00000587136 CLASP1Q7Z460 1538 aa36.02■■■■□ 3.36
PTBP1-212ENST00000587136 RIMBP3CA6NJZ7 1639 aa36.01■■■■□ 3.36
PTBP1-212ENST00000587136 RIMBP3BA6NNM3 1639 aa36.01■■■■□ 3.36
PTBP1-212ENST00000587136 RIMBP3Q9UFD9 1639 aa36.01■■■■□ 3.36
PTBP1-212ENST00000587136 ARHGEF11O15085 1522 aa35.96■■■■□ 3.35
PTBP1-212ENST00000587136 CUL7Q14999 1698 aa35.91■■■■□ 3.34
PTBP1-212ENST00000587136 TRIM41Q8WV44 630 aa35.9■■■■□ 3.34
PTBP1-212ENST00000587136 IGF1RP08069 1367 aa35.88■■■■□ 3.33
PTBP1-212ENST00000587136 CEP170Q5SW79 1584 aa35.86■■■■□ 3.33
PTBP1-212ENST00000587136 NUP160Q12769 1436 aa35.84■■■■□ 3.33
PTBP1-212ENST00000587136 RUSC2Q8N2Y8 1516 aa35.7■■■■□ 3.31
PTBP1-212ENST00000587136 CARMIL1Q5VZK9 1371 aa35.69■■■■□ 3.3
PTBP1-212ENST00000587136 ARAP1Q96P48 1450 aa35.65■■■■□ 3.3
PTBP1-212ENST00000587136 SHROOM2Q13796 1616 aa35.64■■■■□ 3.3
PTBP1-212ENST00000587136 CYB5RLQ6IPT4 315 aa35.59■■■■□ 3.29
PTBP1-212ENST00000587136 ERCC6L2Q5T890 1561 aa35.51■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms