RNA–Protein interactions for RNA: ENST00000587135.1

HDAC5-205, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-205ENST00000587135 NISCHQ9Y2I1 1504 aa47.67■■■■■ 5.22
HDAC5-205ENST00000587135 CCDC180Q9P1Z9 1646 aa42.33■■■■■ 4.37
HDAC5-205ENST00000587135 ABCC9O60706 1549 aa41.68■■■■■ 4.26
HDAC5-205ENST00000587135 RB1CC1Q8TDY2 1594 aa39.97■■■■□ 3.99
HDAC5-205ENST00000587135 NACADO15069 1562 aa39.93■■■■□ 3.98
HDAC5-205ENST00000587135 DCAF8L2P0C7V8 631 aa39.92■■■■□ 3.98
HDAC5-205ENST00000587135 MYO15BQ96JP2 1530 aa39.68■■■■□ 3.94
HDAC5-205ENST00000587135 ZCCHC6Q5VYS8 1495 aaKnown RBP39.64■■■■□ 3.94
HDAC5-205ENST00000587135 DCAF1Q9Y4B6 1507 aa39.44■■■■□ 3.9
HDAC5-205ENST00000587135 PABPN1Q86U42 306 aaKnown RBP eCLIP39■■■■□ 3.83
HDAC5-205ENST00000587135 UNC13AQ9UPW8 1703 aa39■■■■□ 3.83
HDAC5-205ENST00000587135 BICRAQ9NZM4 1560 aa38.83■■■■□ 3.81
HDAC5-205ENST00000587135 SCRIBQ14160 1630 aa38.61■■■■□ 3.77
HDAC5-205ENST00000587135 DNAJC5BQ9UF47 199 aa38.58■■■■□ 3.77
HDAC5-205ENST00000587135 SHROOM4Q9ULL8 1493 aa38.37■■■■□ 3.73
HDAC5-205ENST00000587135 EIF4G1Q04637 1599 aaKnown RBP37.79■■■■□ 3.64
HDAC5-205ENST00000587135 CC2D2AQ9P2K1 1620 aa37.67■■■■□ 3.62
HDAC5-205ENST00000587135 CECR2Q9BXF3 1484 aa37.48■■■■□ 3.59
HDAC5-205ENST00000587135 SMARCA4P51532 1647 aa36.96■■■■□ 3.51
HDAC5-205ENST00000587135 NCAPD3P42695 1498 aa36.92■■■■□ 3.5
HDAC5-205ENST00000587135 BAZ1AQ9NRL2 1556 aaPredicted RBP36.91■■■■□ 3.5
HDAC5-205ENST00000587135 ATAD2BQ9ULI0 1458 aa36.89■■■■□ 3.5
HDAC5-205ENST00000587135 SMARCA2P51531 1590 aa36.75■■■■□ 3.47
HDAC5-205ENST00000587135 MROH2BQ7Z745 1585 aa36.74■■■■□ 3.47
HDAC5-205ENST00000587135 PEG3Q9GZU2 1588 aa36.65■■■■□ 3.46
HDAC5-205ENST00000587135 HMGXB3Q12766 1538 aa36.62■■■■□ 3.45
HDAC5-205ENST00000587135 BAZ1BQ9UIG0 1483 aaKnown RBP36.5■■■■□ 3.43
HDAC5-205ENST00000587135 RSF1Q96T23 1441 aaPredicted RBP36.29■■■■□ 3.4
HDAC5-205ENST00000587135 WIZO95785 1651 aa36.27■■■■□ 3.4
HDAC5-205ENST00000587135 NESP48681 1621 aa36.03■■■■□ 3.36
HDAC5-205ENST00000587135 ERCC6Q03468 1493 aa35.88■■■■□ 3.33
HDAC5-205ENST00000587135 TOP2AP11388 1531 aaKnown RBP35.88■■■■□ 3.33
HDAC5-205ENST00000587135 LAMC3Q9Y6N6 1575 aa35.87■■■■□ 3.33
HDAC5-205ENST00000587135 CADPSQ9ULU8 1353 aa35.84■■■■□ 3.33
HDAC5-205ENST00000587135 PDS5BQ9NTI5 1447 aa35.69■■■■□ 3.3
HDAC5-205ENST00000587135 CUX2O14529 1486 aa35.61■■■■□ 3.29
HDAC5-205ENST00000587135 CFTRP13569 1480 aa35.57■■■■□ 3.28
HDAC5-205ENST00000587135 CCDC88BA6NC98 1476 aa35.54■■■■□ 3.28
HDAC5-205ENST00000587135 KIF21AQ7Z4S6 1674 aa35.48■■■■□ 3.27
HDAC5-205ENST00000587135 THOC2Q8NI27 1593 aaKnown RBP35.45■■■■□ 3.27
HDAC5-205ENST00000587135 FANCD2Q9BXW9 1451 aa35.36■■■■□ 3.25
HDAC5-205ENST00000587135 MRC2Q9UBG0 1479 aa35.29■■■■□ 3.24
HDAC5-205ENST00000587135 CEP164Q9UPV0 1460 aa35.29■■■■□ 3.24
HDAC5-205ENST00000587135 SUPT5HO00267 1087 aaKnown RBP35.21■■■■□ 3.23
HDAC5-205ENST00000587135 WDR62O43379 1518 aa35.18■■■■□ 3.22
HDAC5-205ENST00000587135 PRDM2Q13029 1718 aa35.06■■■■□ 3.2
HDAC5-205ENST00000587135 URB2Q14146 1524 aaKnown RBP35.02■■■■□ 3.2
HDAC5-205ENST00000587135 DNAJC5Q9H3Z4 198 aa34.86■■■■□ 3.17
HDAC5-205ENST00000587135 TOPBP1Q92547 1522 aa34.77■■■■□ 3.16
HDAC5-205ENST00000587135 ABCC8Q09428 1581 aa34.77■■■■□ 3.16
HDAC5-205ENST00000587135 DNMBPQ6XZF7 1577 aa34.68■■■■□ 3.14
HDAC5-205ENST00000587135 IFT140Q96RY7 1462 aa34.6■■■■□ 3.13
HDAC5-205ENST00000587135 ZNF608Q9ULD9 1512 aaPredicted RBP34.49■■■■□ 3.11
HDAC5-205ENST00000587135 POLA1P09884 1462 aaPredicted RBP34.47■■■■□ 3.11
HDAC5-205ENST00000587135 CUX1P39880 1505 aa34.45■■■■□ 3.11
HDAC5-205ENST00000587135 TARBP1Q13395 1621 aaKnown RBP34.4■■■■□ 3.1
HDAC5-205ENST00000587135 SOGA1O94964 1423 aa34.37■■■■□ 3.09
HDAC5-205ENST00000587135 FGD5Q6ZNL6 1462 aa34.34■■■■□ 3.09
HDAC5-205ENST00000587135 RAD54L2Q9Y4B4 1467 aa34.34■■■■□ 3.09
HDAC5-205ENST00000587135 AQRO60306 1485 aaKnown RBP eCLIP34.29■■■■□ 3.081e-12■■■■■ 49.3
HDAC5-205ENST00000587135 EIF4G3O43432 1585 aaKnown RBP34.23■■■■□ 3.07
HDAC5-205ENST00000587135 TDRD9Q8NDG6 1382 aaKnown RBP34.21■■■■□ 3.07
HDAC5-205ENST00000587135 OSCARQ8IYS5 282 aa34.2■■■■□ 3.07
HDAC5-205ENST00000587135 WRNQ14191 1432 aaPredicted RBP eCLIP34.17■■■■□ 3.06
HDAC5-205ENST00000587135 TOP2BQ02880 1626 aa34.08■■■■□ 3.05
HDAC5-205ENST00000587135 WDR97A6NE52 1622 aa34.07■■■■□ 3.04
HDAC5-205ENST00000587135 SYNJ1O43426 1573 aa34.06■■■■□ 3.04
HDAC5-205ENST00000587135 BIVM-ERCC5R4GMW8 1640 aa34.04■■■■□ 3.04
HDAC5-205ENST00000587135 ABCA10Q8WWZ4 1543 aa34.04■■■■□ 3.04
HDAC5-205ENST00000587135 GRIN2BQ13224 1484 aa33.95■■■■□ 3.02
HDAC5-205ENST00000587135 GAPVD1Q14C86 1478 aa33.93■■■■□ 3.02
HDAC5-205ENST00000587135 SNAPC4Q5SXM2 1469 aa33.9■■■■□ 3.02
HDAC5-205ENST00000587135 FBLN2P98095 1184 aa33.88■■■■□ 3.01
HDAC5-205ENST00000587135 MAGI1Q96QZ7 1491 aaPredicted RBP33.86■■■■□ 3.01
HDAC5-205ENST00000587135 ABCA5Q8WWZ7 1642 aa33.85■■■■□ 3.01
HDAC5-205ENST00000587135 CHD1O14646 1710 aa33.79■■■■□ 3
HDAC5-205ENST00000587135 CHMP7Q8WUX9 453 aaPredicted RBP33.79■■■■□ 3
HDAC5-205ENST00000587135 SYNJ2O15056 1496 aa33.75■■■□□ 2.99
HDAC5-205ENST00000587135 PBRM1Q86U86 1689 aa33.74■■■□□ 2.99
HDAC5-205ENST00000587135 ERICH3Q5RHP9 1530 aa33.59■■■□□ 2.97
HDAC5-205ENST00000587135 ARHGEF11O15085 1522 aa33.55■■■□□ 2.96
HDAC5-205ENST00000587135 FHAD1B1AJZ9 1412 aa33.54■■■□□ 2.96
HDAC5-205ENST00000587135 RIMBP3CA6NJZ7 1639 aa33.54■■■□□ 2.96
HDAC5-205ENST00000587135 RIMBP3BA6NNM3 1639 aa33.54■■■□□ 2.96
HDAC5-205ENST00000587135 RIMBP3Q9UFD9 1639 aa33.54■■■□□ 2.96
HDAC5-205ENST00000587135 CLASP1Q7Z460 1538 aa33.53■■■□□ 2.96
HDAC5-205ENST00000587135 TRIM41Q8WV44 630 aa33.53■■■□□ 2.96
HDAC5-205ENST00000587135 ADAMTS12P58397 1594 aa33.52■■■□□ 2.96
HDAC5-205ENST00000587135 GRIN2AQ12879 1464 aa33.5■■■□□ 2.95
HDAC5-205ENST00000587135 KIF27Q86VH2 1401 aa33.47■■■□□ 2.95
HDAC5-205ENST00000587135 IGF1RP08069 1367 aa33.46■■■□□ 2.95
HDAC5-205ENST00000587135 NUP160Q12769 1436 aa33.39■■■□□ 2.94
HDAC5-205ENST00000587135 CYB5RLQ6IPT4 315 aa33.34■■■□□ 2.93
HDAC5-205ENST00000587135 CEP170Q5SW79 1584 aa33.32■■■□□ 2.92
HDAC5-205ENST00000587135 ARAP1Q96P48 1450 aa33.29■■■□□ 2.92
HDAC5-205ENST00000587135 CARMIL1Q5VZK9 1371 aa33.2■■■□□ 2.9
HDAC5-205ENST00000587135 CUL7Q14999 1698 aa33.18■■■□□ 2.9
HDAC5-205ENST00000587135 RUSC2Q8N2Y8 1516 aa33.17■■■□□ 2.9
HDAC5-205ENST00000587135 JPH4Q96JJ6 628 aa33.12■■■□□ 2.89
HDAC5-205ENST00000587135 SHROOM2Q13796 1616 aa33.1■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms