RNA–Protein interactions for RNA: ENST00000587110.1

AC055813.1-201, humanhuman

BASIC

Gene AC055813.1, Length 2,123 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055813.1-201ENST00000587110 NISCHQ9Y2I1 1504 aa27.43■■□□□ 1.98
AC055813.1-201ENST00000587110 CCDC180Q9P1Z9 1646 aa23.87■■□□□ 1.41
AC055813.1-201ENST00000587110 DCAF8L2P0C7V8 631 aa22.98■■□□□ 1.27
AC055813.1-201ENST00000587110 ZCCHC6Q5VYS8 1495 aaKnown RBP22.97■■□□□ 1.27
AC055813.1-201ENST00000587110 ABCC9O60706 1549 aa22.94■■□□□ 1.26
AC055813.1-201ENST00000587110 DCAF1Q9Y4B6 1507 aa22.61■■□□□ 1.21
AC055813.1-201ENST00000587110 MYO15BQ96JP2 1530 aa22.41■■□□□ 1.18
AC055813.1-201ENST00000587110 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
AC055813.1-201ENST00000587110 NACADO15069 1562 aa22.36■■□□□ 1.17
AC055813.1-201ENST00000587110 RB1CC1Q8TDY2 1594 aa22.22■■□□□ 1.15
AC055813.1-201ENST00000587110 SCRIBQ14160 1630 aa22.05■■□□□ 1.12
AC055813.1-201ENST00000587110 PABPN1Q86U42 306 aaKnown RBP eCLIP21.69■■□□□ 1.06
AC055813.1-201ENST00000587110 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
AC055813.1-201ENST00000587110 BICRAQ9NZM4 1560 aa21.54■■□□□ 1.04
AC055813.1-201ENST00000587110 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
AC055813.1-201ENST00000587110 CECR2Q9BXF3 1484 aa21.38■■□□□ 1.01
AC055813.1-201ENST00000587110 RSF1Q96T23 1441 aaPredicted RBP21.26■□□□□ 0.99
AC055813.1-201ENST00000587110 MROH2BQ7Z745 1585 aa21.21■□□□□ 0.99
AC055813.1-201ENST00000587110 BAZ1AQ9NRL2 1556 aaPredicted RBP21.18■□□□□ 0.98
AC055813.1-201ENST00000587110 SMARCA4P51532 1647 aa21.08■□□□□ 0.96
AC055813.1-201ENST00000587110 WIZO95785 1651 aa20.99■□□□□ 0.95
AC055813.1-201ENST00000587110 EIF4G1Q04637 1599 aaKnown RBP20.93■□□□□ 0.94
AC055813.1-201ENST00000587110 ATAD2BQ9ULI0 1458 aa20.84■□□□□ 0.93
AC055813.1-201ENST00000587110 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
AC055813.1-201ENST00000587110 SMARCA2P51531 1590 aa20.79■□□□□ 0.92
AC055813.1-201ENST00000587110 TOP2AP11388 1531 aaKnown RBP20.74■□□□□ 0.91
AC055813.1-201ENST00000587110 BAZ1BQ9UIG0 1483 aaKnown RBP20.73■□□□□ 0.91
AC055813.1-201ENST00000587110 NCAPD3P42695 1498 aa20.69■□□□□ 0.9
AC055813.1-201ENST00000587110 CC2D2AQ9P2K1 1620 aa20.68■□□□□ 0.9
AC055813.1-201ENST00000587110 CCDC88BA6NC98 1476 aa20.61■□□□□ 0.89
AC055813.1-201ENST00000587110 HMGXB3Q12766 1538 aa20.58■□□□□ 0.88
AC055813.1-201ENST00000587110 DNAJC5BQ9UF47 199 aa20.48■□□□□ 0.87
AC055813.1-201ENST00000587110 CHIC1Q5VXU3 224 aa20.44■□□□□ 0.86
AC055813.1-201ENST00000587110 TRIM41Q8WV44 630 aa20.23■□□□□ 0.83
AC055813.1-201ENST00000587110 CADPSQ9ULU8 1353 aa20.2■□□□□ 0.82
AC055813.1-201ENST00000587110 CFTRP13569 1480 aa20.19■□□□□ 0.82
AC055813.1-201ENST00000587110 ABCC8Q09428 1581 aa20.1■□□□□ 0.81
AC055813.1-201ENST00000587110 NESP48681 1621 aa20.06■□□□□ 0.8
AC055813.1-201ENST00000587110 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.8
AC055813.1-201ENST00000587110 LAMC3Q9Y6N6 1575 aa19.96■□□□□ 0.79
AC055813.1-201ENST00000587110 FANCD2Q9BXW9 1451 aa19.95■□□□□ 0.78
AC055813.1-201ENST00000587110 PDS5BQ9NTI5 1447 aa19.91■□□□□ 0.78
AC055813.1-201ENST00000587110 FAM9AQ8IZU1 332 aaPredicted RBP19.89■□□□□ 0.77
AC055813.1-201ENST00000587110 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
AC055813.1-201ENST00000587110 SYNJ1O43426 1573 aa19.88■□□□□ 0.77
AC055813.1-201ENST00000587110 CUX1P39880 1505 aa19.82■□□□□ 0.76
AC055813.1-201ENST00000587110 CEP164Q9UPV0 1460 aa19.82■□□□□ 0.76
AC055813.1-201ENST00000587110 TOP2BQ02880 1626 aa19.79■□□□□ 0.76
AC055813.1-201ENST00000587110 SOGA1O94964 1423 aa19.75■□□□□ 0.75
AC055813.1-201ENST00000587110 BIVM-ERCC5R4GMW8 1640 aa19.73■□□□□ 0.75
AC055813.1-201ENST00000587110 LOC105371045A0A1W2PR82 267 aa19.72■□□□□ 0.75
AC055813.1-201ENST00000587110 KIF21AQ7Z4S6 1674 aa19.71■□□□□ 0.75
AC055813.1-201ENST00000587110 ERCC6Q03468 1493 aa19.69■□□□□ 0.74
AC055813.1-201ENST00000587110 TOPBP1Q92547 1522 aa19.69■□□□□ 0.74
AC055813.1-201ENST00000587110 URB2Q14146 1524 aaKnown RBP19.68■□□□□ 0.74
AC055813.1-201ENST00000587110 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
AC055813.1-201ENST00000587110 DNMBPQ6XZF7 1577 aa19.67■□□□□ 0.74
AC055813.1-201ENST00000587110 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
AC055813.1-201ENST00000587110 FGD5Q6ZNL6 1462 aa19.66■□□□□ 0.74
AC055813.1-201ENST00000587110 CSRNP3Q8WYN3 585 aa19.63■□□□□ 0.73
AC055813.1-201ENST00000587110 MRC2Q9UBG0 1479 aa19.61■□□□□ 0.73
AC055813.1-201ENST00000587110 EEA1Q15075 1411 aa19.59■□□□□ 0.73
AC055813.1-201ENST00000587110 POLA1P09884 1462 aaPredicted RBP19.59■□□□□ 0.73
AC055813.1-201ENST00000587110 RAD54L2Q9Y4B4 1467 aa19.56■□□□□ 0.72
AC055813.1-201ENST00000587110 KIF27Q86VH2 1401 aa19.54■□□□□ 0.72
AC055813.1-201ENST00000587110 CUX2O14529 1486 aa19.53■□□□□ 0.72
AC055813.1-201ENST00000587110 WDR62O43379 1518 aa19.47■□□□□ 0.71
AC055813.1-201ENST00000587110 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
AC055813.1-201ENST00000587110 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
AC055813.1-201ENST00000587110 THOC2Q8NI27 1593 aaKnown RBP19.42■□□□□ 0.7
AC055813.1-201ENST00000587110 IGF1RP08069 1367 aa19.42■□□□□ 0.7
AC055813.1-201ENST00000587110 UBTFP17480 764 aaKnown RBP19.42■□□□□ 0.7
AC055813.1-201ENST00000587110 TARBP1Q13395 1621 aaKnown RBP19.35■□□□□ 0.69
AC055813.1-201ENST00000587110 IFT140Q96RY7 1462 aa19.35■□□□□ 0.69
AC055813.1-201ENST00000587110 GOLGA3Q08378 1498 aa19.33■□□□□ 0.68
AC055813.1-201ENST00000587110 AQRO60306 1485 aaKnown RBP eCLIP19.32■□□□□ 0.68
AC055813.1-201ENST00000587110 GAPVD1Q14C86 1478 aa19.32■□□□□ 0.68
AC055813.1-201ENST00000587110 PRXQ9BXM0 1461 aa19.32■□□□□ 0.68
AC055813.1-201ENST00000587110 RAPGEF2Q9Y4G8 1499 aa19.32■□□□□ 0.68
AC055813.1-201ENST00000587110 CARMIL1Q5VZK9 1371 aa19.31■□□□□ 0.68
AC055813.1-201ENST00000587110 ZNF608Q9ULD9 1512 aaPredicted RBP19.29■□□□□ 0.68
AC055813.1-201ENST00000587110 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
AC055813.1-201ENST00000587110 KIF21BO75037 1637 aa19.28■□□□□ 0.68
AC055813.1-201ENST00000587110 TNIKQ9UKE5 1360 aa19.27■□□□□ 0.67
AC055813.1-201ENST00000587110 ABCA5Q8WWZ7 1642 aa19.25■□□□□ 0.67
AC055813.1-201ENST00000587110 ERICH3Q5RHP9 1530 aa19.21■□□□□ 0.67
AC055813.1-201ENST00000587110 RANGAP1P46060 587 aaPredicted RBP19.21■□□□□ 0.67
AC055813.1-201ENST00000587110 GRIN2BQ13224 1484 aa19.19■□□□□ 0.66
AC055813.1-201ENST00000587110 CEP162Q5TB80 1403 aa19.15■□□□□ 0.66
AC055813.1-201ENST00000587110 EIF4G3O43432 1585 aaKnown RBP19.13■□□□□ 0.65
AC055813.1-201ENST00000587110 CUL7Q14999 1698 aa19.13■□□□□ 0.65
AC055813.1-201ENST00000587110 FHAD1B1AJZ9 1412 aa19.11■□□□□ 0.65
AC055813.1-201ENST00000587110 PBRM1Q86U86 1689 aa19.09■□□□□ 0.65
AC055813.1-201ENST00000587110 FBLN2P98095 1184 aa19.09■□□□□ 0.65
AC055813.1-201ENST00000587110 SNAPC4Q5SXM2 1469 aa19.08■□□□□ 0.65
AC055813.1-201ENST00000587110 HRCP23327 699 aa19.07■□□□□ 0.64
AC055813.1-201ENST00000587110 CLIP1P30622 1438 aa19.06■□□□□ 0.64
AC055813.1-201ENST00000587110 CHMP7Q8WUX9 453 aaPredicted RBP19.06■□□□□ 0.64
AC055813.1-201ENST00000587110 ADAMTS12P58397 1594 aa19.02■□□□□ 0.64
AC055813.1-201ENST00000587110 MAGI1Q96QZ7 1491 aaPredicted RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms