RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 NISCHQ9Y2I1 1504 aa20.17■□□□□ 0.82
CAPNS1-203ENST00000586963 ABCC9O60706 1549 aa18.14■□□□□ 0.49
CAPNS1-203ENST00000586963 CCDC180Q9P1Z9 1646 aa18.05■□□□□ 0.48
CAPNS1-203ENST00000586963 RB1CC1Q8TDY2 1594 aa17.25■□□□□ 0.35
CAPNS1-203ENST00000586963 NACADO15069 1562 aa17.15■□□□□ 0.34
CAPNS1-203ENST00000586963 DNAJC5BQ9UF47 199 aa17.12■□□□□ 0.33
CAPNS1-203ENST00000586963 DCAF8L2P0C7V8 631 aa17.05■□□□□ 0.32
CAPNS1-203ENST00000586963 MYO15BQ96JP2 1530 aa16.93■□□□□ 0.3
CAPNS1-203ENST00000586963 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
CAPNS1-203ENST00000586963 UNC13AQ9UPW8 1703 aa16.76■□□□□ 0.27
CAPNS1-203ENST00000586963 BICRAQ9NZM4 1560 aa16.74■□□□□ 0.27
CAPNS1-203ENST00000586963 ZCCHC6Q5VYS8 1495 aaKnown RBP16.68■□□□□ 0.26
CAPNS1-203ENST00000586963 DCAF1Q9Y4B6 1507 aa16.68■□□□□ 0.26
CAPNS1-203ENST00000586963 SHROOM4Q9ULL8 1493 aa16.57■□□□□ 0.24
CAPNS1-203ENST00000586963 SCRIBQ14160 1630 aa16.43■□□□□ 0.22
CAPNS1-203ENST00000586963 CECR2Q9BXF3 1484 aa16.37■□□□□ 0.21
CAPNS1-203ENST00000586963 CC2D2AQ9P2K1 1620 aa16.37■□□□□ 0.21
CAPNS1-203ENST00000586963 EIF4G1Q04637 1599 aaKnown RBP16.34■□□□□ 0.21
CAPNS1-203ENST00000586963 NCAPD3P42695 1498 aa15.86■□□□□ 0.13
CAPNS1-203ENST00000586963 ATAD2BQ9ULI0 1458 aa15.78■□□□□ 0.12
CAPNS1-203ENST00000586963 DNAJC5Q9H3Z4 198 aa15.78■□□□□ 0.12
CAPNS1-203ENST00000586963 SMARCA2P51531 1590 aa15.71■□□□□ 0.11
CAPNS1-203ENST00000586963 SMARCA4P51532 1647 aa15.7■□□□□ 0.1
CAPNS1-203ENST00000586963 CUX2O14529 1486 aa15.7■□□□□ 0.1
CAPNS1-203ENST00000586963 HMGXB3Q12766 1538 aa15.69■□□□□ 0.1
CAPNS1-203ENST00000586963 ERCC6Q03468 1493 aa15.68■□□□□ 0.1
CAPNS1-203ENST00000586963 BAZ1AQ9NRL2 1556 aaPredicted RBP15.65■□□□□ 0.1
CAPNS1-203ENST00000586963 BAZ1BQ9UIG0 1483 aaKnown RBP15.6■□□□□ 0.09
CAPNS1-203ENST00000586963 PEG3Q9GZU2 1588 aa15.58■□□□□ 0.09
CAPNS1-203ENST00000586963 NESP48681 1621 aa15.56■□□□□ 0.08
CAPNS1-203ENST00000586963 MROH2BQ7Z745 1585 aa15.52■□□□□ 0.07
CAPNS1-203ENST00000586963 LAMC3Q9Y6N6 1575 aa15.46■□□□□ 0.07
CAPNS1-203ENST00000586963 PDS5BQ9NTI5 1447 aa15.43■□□□□ 0.06
CAPNS1-203ENST00000586963 THOC2Q8NI27 1593 aaKnown RBP15.39■□□□□ 0.05
CAPNS1-203ENST00000586963 CADPSQ9ULU8 1353 aa15.38■□□□□ 0.05
CAPNS1-203ENST00000586963 KIF21AQ7Z4S6 1674 aa15.29■□□□□ 0.04
CAPNS1-203ENST00000586963 WIZO95785 1651 aa15.28■□□□□ 0.04
CAPNS1-203ENST00000586963 MRC2Q9UBG0 1479 aa15.25■□□□□ 0.03
CAPNS1-203ENST00000586963 RSF1Q96T23 1441 aaPredicted RBP15.21■□□□□ 0.03
CAPNS1-203ENST00000586963 WDR62O43379 1518 aa15.2■□□□□ 0.02
CAPNS1-203ENST00000586963 CFTRP13569 1480 aa15.18■□□□□ 0.02
CAPNS1-203ENST00000586963 CEP164Q9UPV0 1460 aa15.18■□□□□ 0.02
CAPNS1-203ENST00000586963 FANCD2Q9BXW9 1451 aa15.17■□□□□ 0.02
CAPNS1-203ENST00000586963 TOP2AP11388 1531 aaKnown RBP15.12■□□□□ 0.01
CAPNS1-203ENST00000586963 URB2Q14146 1524 aaKnown RBP15.03■□□□□ -0
CAPNS1-203ENST00000586963 TRIM41Q8WV44 630 aa15.02■□□□□ -0
CAPNS1-203ENST00000586963 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
CAPNS1-203ENST00000586963 CCDC88BA6NC98 1476 aa14.98□□□□□ -0.01
CAPNS1-203ENST00000586963 IFT140Q96RY7 1462 aa14.89□□□□□ -0.03
CAPNS1-203ENST00000586963 PRDM2Q13029 1718 aa14.89□□□□□ -0.03
CAPNS1-203ENST00000586963 ABCC8Q09428 1581 aa14.87□□□□□ -0.03
CAPNS1-203ENST00000586963 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
CAPNS1-203ENST00000586963 ZNF608Q9ULD9 1512 aaPredicted RBP14.85□□□□□ -0.03
CAPNS1-203ENST00000586963 DNMBPQ6XZF7 1577 aa14.79□□□□□ -0.04
CAPNS1-203ENST00000586963 AQRO60306 1485 aaKnown RBP eCLIP14.73□□□□□ -0.051e-9■□□□□ 10.3
CAPNS1-203ENST00000586963 EIF4G3O43432 1585 aaKnown RBP14.73□□□□□ -0.05
CAPNS1-203ENST00000586963 RIMBP3CA6NJZ7 1639 aa14.72□□□□□ -0.05
CAPNS1-203ENST00000586963 RIMBP3BA6NNM3 1639 aa14.72□□□□□ -0.05
CAPNS1-203ENST00000586963 RIMBP3Q9UFD9 1639 aa14.72□□□□□ -0.05
CAPNS1-203ENST00000586963 POLA1P09884 1462 aaPredicted RBP14.71□□□□□ -0.05
CAPNS1-203ENST00000586963 TARBP1Q13395 1621 aaKnown RBP14.71□□□□□ -0.05
CAPNS1-203ENST00000586963 ARHGEF11O15085 1522 aa14.7□□□□□ -0.06
CAPNS1-203ENST00000586963 SOGA1O94964 1423 aa14.67□□□□□ -0.06
CAPNS1-203ENST00000586963 RAD54L2Q9Y4B4 1467 aa14.65□□□□□ -0.06
CAPNS1-203ENST00000586963 FBLN2P98095 1184 aa14.65□□□□□ -0.06
CAPNS1-203ENST00000586963 TDRD9Q8NDG6 1382 aaKnown RBP14.64□□□□□ -0.07
CAPNS1-203ENST00000586963 CYB5RLQ6IPT4 315 aa14.64□□□□□ -0.07
CAPNS1-203ENST00000586963 FGD5Q6ZNL6 1462 aa14.6□□□□□ -0.07
CAPNS1-203ENST00000586963 WDR97A6NE52 1622 aa14.59□□□□□ -0.07
CAPNS1-203ENST00000586963 CHD1O14646 1710 aa14.58□□□□□ -0.07
CAPNS1-203ENST00000586963 CUX1P39880 1505 aa14.58□□□□□ -0.08
CAPNS1-203ENST00000586963 CHMP7Q8WUX9 453 aaPredicted RBP14.56□□□□□ -0.08
CAPNS1-203ENST00000586963 SNAPC4Q5SXM2 1469 aa14.56□□□□□ -0.08
CAPNS1-203ENST00000586963 ARAP1Q96P48 1450 aa14.56□□□□□ -0.08
CAPNS1-203ENST00000586963 GRIN2BQ13224 1484 aa14.54□□□□□ -0.08
CAPNS1-203ENST00000586963 MAGI1Q96QZ7 1491 aaPredicted RBP14.54□□□□□ -0.08
CAPNS1-203ENST00000586963 SYNJ2O15056 1496 aa14.5□□□□□ -0.09
CAPNS1-203ENST00000586963 SUPT5HO00267 1087 aaKnown RBP14.49□□□□□ -0.09
CAPNS1-203ENST00000586963 CLASP1Q7Z460 1538 aa14.49□□□□□ -0.09
CAPNS1-203ENST00000586963 SYNJ1O43426 1573 aa14.48□□□□□ -0.09
CAPNS1-203ENST00000586963 TRHP20396 242 aaPredicted RBP14.48□□□□□ -0.09
CAPNS1-203ENST00000586963 GAPVD1Q14C86 1478 aa14.48□□□□□ -0.09
CAPNS1-203ENST00000586963 ABCA10Q8WWZ4 1543 aa14.46□□□□□ -0.1
CAPNS1-203ENST00000586963 WRNQ14191 1432 aaPredicted RBP eCLIP14.41□□□□□ -0.1
CAPNS1-203ENST00000586963 ABCA5Q8WWZ7 1642 aa14.39□□□□□ -0.11
CAPNS1-203ENST00000586963 PBRM1Q86U86 1689 aa14.38□□□□□ -0.11
CAPNS1-203ENST00000586963 GRIN2AQ12879 1464 aa14.34□□□□□ -0.11
CAPNS1-203ENST00000586963 TOP2BQ02880 1626 aa14.33□□□□□ -0.12
CAPNS1-203ENST00000586963 NUP160Q12769 1436 aa14.32□□□□□ -0.12
CAPNS1-203ENST00000586963 FHAD1B1AJZ9 1412 aa14.31□□□□□ -0.12
CAPNS1-203ENST00000586963 BIVM-ERCC5R4GMW8 1640 aa14.3□□□□□ -0.12
CAPNS1-203ENST00000586963 ADAMTS12P58397 1594 aa14.28□□□□□ -0.12
CAPNS1-203ENST00000586963 ERICH3Q5RHP9 1530 aa14.27□□□□□ -0.12
CAPNS1-203ENST00000586963 CEP170Q5SW79 1584 aa14.26□□□□□ -0.13
CAPNS1-203ENST00000586963 ERCC6L2Q5T890 1561 aa14.24□□□□□ -0.13
CAPNS1-203ENST00000586963 SHROOM2Q13796 1616 aa14.2□□□□□ -0.14
CAPNS1-203ENST00000586963 JPH4Q96JJ6 628 aa14.2□□□□□ -0.14
CAPNS1-203ENST00000586963 PRG4Q92954 1404 aaPredicted RBP14.17□□□□□ -0.14
CAPNS1-203ENST00000586963 IGF1RP08069 1367 aa14.12□□□□□ -0.15
CAPNS1-203ENST00000586963 AEBP2Q6ZN18 517 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms