RNA–Protein interactions for RNA: ENST00000586915.1

CLPTM1-205, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-205ENST00000586915 NISCHQ9Y2I1 1504 aa42.1■■■■■ 4.33
CLPTM1-205ENST00000586915 CCDC180Q9P1Z9 1646 aa37.55■■■■□ 3.6
CLPTM1-205ENST00000586915 ABCC9O60706 1549 aa36.62■■■■□ 3.45
CLPTM1-205ENST00000586915 RB1CC1Q8TDY2 1594 aa35.3■■■■□ 3.24
CLPTM1-205ENST00000586915 NACADO15069 1562 aa35.25■■■■□ 3.23
CLPTM1-205ENST00000586915 ZCCHC6Q5VYS8 1495 aaKnown RBP35.1■■■■□ 3.21
CLPTM1-205ENST00000586915 MYO15BQ96JP2 1530 aa35.06■■■■□ 3.2
CLPTM1-205ENST00000586915 DCAF8L2P0C7V8 631 aa34.96■■■■□ 3.19
CLPTM1-205ENST00000586915 DCAF1Q9Y4B6 1507 aa34.89■■■■□ 3.18
CLPTM1-205ENST00000586915 UNC13AQ9UPW8 1703 aa34.52■■■■□ 3.12
CLPTM1-205ENST00000586915 BICRAQ9NZM4 1560 aa34.23■■■■□ 3.07
CLPTM1-205ENST00000586915 SCRIBQ14160 1630 aa34.18■■■■□ 3.06
CLPTM1-205ENST00000586915 PABPN1Q86U42 306 aaKnown RBP eCLIP34.12■■■■□ 3.05
CLPTM1-205ENST00000586915 SHROOM4Q9ULL8 1493 aa33.95■■■■□ 3.03
CLPTM1-205ENST00000586915 DNAJC5BQ9UF47 199 aa33.54■■■□□ 2.96
CLPTM1-205ENST00000586915 EIF4G1Q04637 1599 aaKnown RBP33.33■■■□□ 2.93
CLPTM1-205ENST00000586915 CC2D2AQ9P2K1 1620 aa33.18■■■□□ 2.9
CLPTM1-205ENST00000586915 CECR2Q9BXF3 1484 aa32.93■■■□□ 2.86
CLPTM1-205ENST00000586915 SMARCA4P51532 1647 aa32.71■■■□□ 2.83
CLPTM1-205ENST00000586915 BAZ1AQ9NRL2 1556 aaPredicted RBP32.66■■■□□ 2.82
CLPTM1-205ENST00000586915 SMARCA2P51531 1590 aa32.5■■■□□ 2.79
CLPTM1-205ENST00000586915 NCAPD3P42695 1498 aa32.48■■■□□ 2.79
CLPTM1-205ENST00000586915 ATAD2BQ9ULI0 1458 aa32.48■■■□□ 2.79
CLPTM1-205ENST00000586915 MROH2BQ7Z745 1585 aa32.42■■■□□ 2.78
CLPTM1-205ENST00000586915 PEG3Q9GZU2 1588 aa32.42■■■□□ 2.78
CLPTM1-205ENST00000586915 HMGXB3Q12766 1538 aa32.4■■■□□ 2.78
CLPTM1-205ENST00000586915 BAZ1BQ9UIG0 1483 aaKnown RBP32.24■■■□□ 2.75
CLPTM1-205ENST00000586915 WIZO95785 1651 aa32.08■■■□□ 2.73
CLPTM1-205ENST00000586915 RSF1Q96T23 1441 aaPredicted RBP32.01■■■□□ 2.72
CLPTM1-205ENST00000586915 TOP2AP11388 1531 aaKnown RBP31.79■■■□□ 2.68
CLPTM1-205ENST00000586915 LAMC3Q9Y6N6 1575 aa31.68■■■□□ 2.66
CLPTM1-205ENST00000586915 NESP48681 1621 aa31.68■■■□□ 2.66
CLPTM1-205ENST00000586915 ERCC6Q03468 1493 aa31.59■■■□□ 2.65
CLPTM1-205ENST00000586915 CADPSQ9ULU8 1353 aa31.5■■■□□ 2.63
CLPTM1-205ENST00000586915 PDS5BQ9NTI5 1447 aa31.41■■■□□ 2.62
CLPTM1-205ENST00000586915 KIF21AQ7Z4S6 1674 aa31.39■■■□□ 2.62
CLPTM1-205ENST00000586915 CFTRP13569 1480 aa31.35■■■□□ 2.61
CLPTM1-205ENST00000586915 CUX2O14529 1486 aa31.33■■■□□ 2.61
CLPTM1-205ENST00000586915 THOC2Q8NI27 1593 aaKnown RBP31.33■■■□□ 2.61
CLPTM1-205ENST00000586915 CCDC88BA6NC98 1476 aa31.33■■■□□ 2.61
CLPTM1-205ENST00000586915 PRDM2Q13029 1718 aa31.22■■■□□ 2.59
CLPTM1-205ENST00000586915 FANCD2Q9BXW9 1451 aa31.17■■■□□ 2.58
CLPTM1-205ENST00000586915 CEP164Q9UPV0 1460 aa31.16■■■□□ 2.58
CLPTM1-205ENST00000586915 MRC2Q9UBG0 1479 aa31.14■■■□□ 2.57
CLPTM1-205ENST00000586915 WDR62O43379 1518 aa31.07■■■□□ 2.56
CLPTM1-205ENST00000586915 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
CLPTM1-205ENST00000586915 URB2Q14146 1524 aaKnown RBP30.87■■■□□ 2.53
CLPTM1-205ENST00000586915 DNMBPQ6XZF7 1577 aa30.68■■■□□ 2.5
CLPTM1-205ENST00000586915 TOPBP1Q92547 1522 aa30.68■■■□□ 2.5
CLPTM1-205ENST00000586915 ABCC8Q09428 1581 aa30.67■■■□□ 2.5
CLPTM1-205ENST00000586915 IFT140Q96RY7 1462 aa30.5■■■□□ 2.47
CLPTM1-205ENST00000586915 CUX1P39880 1505 aa30.44■■■□□ 2.46
CLPTM1-205ENST00000586915 POLA1P09884 1462 aaPredicted RBP30.42■■■□□ 2.46
CLPTM1-205ENST00000586915 TARBP1Q13395 1621 aaKnown RBP30.38■■■□□ 2.45
CLPTM1-205ENST00000586915 ZNF608Q9ULD9 1512 aaPredicted RBP30.33■■■□□ 2.45
CLPTM1-205ENST00000586915 FGD5Q6ZNL6 1462 aa30.33■■■□□ 2.45
CLPTM1-205ENST00000586915 EIF4G3O43432 1585 aaKnown RBP30.3■■■□□ 2.44
CLPTM1-205ENST00000586915 DNAJC5Q9H3Z4 198 aa30.27■■■□□ 2.44
CLPTM1-205ENST00000586915 RAD54L2Q9Y4B4 1467 aa30.23■■■□□ 2.43
CLPTM1-205ENST00000586915 SOGA1O94964 1423 aa30.22■■■□□ 2.43
CLPTM1-205ENST00000586915 BIVM-ERCC5R4GMW8 1640 aa30.22■■■□□ 2.43
CLPTM1-205ENST00000586915 WDR97A6NE52 1622 aa30.21■■■□□ 2.43
CLPTM1-205ENST00000586915 WRNQ14191 1432 aaPredicted RBP eCLIP30.21■■■□□ 2.43
CLPTM1-205ENST00000586915 TOP2BQ02880 1626 aa30.19■■■□□ 2.42
CLPTM1-205ENST00000586915 SYNJ1O43426 1573 aa30.17■■■□□ 2.42
CLPTM1-205ENST00000586915 AQRO60306 1485 aaKnown RBP eCLIP30.12■■■□□ 2.41
CLPTM1-205ENST00000586915 ABCA10Q8WWZ4 1543 aa30.06■■■□□ 2.4
CLPTM1-205ENST00000586915 TDRD9Q8NDG6 1382 aaKnown RBP30.03■■■□□ 2.4
CLPTM1-205ENST00000586915 ABCA5Q8WWZ7 1642 aa29.99■■■□□ 2.39
CLPTM1-205ENST00000586915 PBRM1Q86U86 1689 aa29.95■■■□□ 2.38
CLPTM1-205ENST00000586915 GRIN2BQ13224 1484 aa29.93■■■□□ 2.38
CLPTM1-205ENST00000586915 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
CLPTM1-205ENST00000586915 CHD1O14646 1710 aa29.91■■■□□ 2.38
CLPTM1-205ENST00000586915 SNAPC4Q5SXM2 1469 aa29.91■■■□□ 2.38
CLPTM1-205ENST00000586915 MAGI1Q96QZ7 1491 aaPredicted RBP29.9■■■□□ 2.38
CLPTM1-205ENST00000586915 OSCARQ8IYS5 282 aa29.88■■■□□ 2.37
CLPTM1-205ENST00000586915 SYNJ2O15056 1496 aa29.76■■■□□ 2.35
CLPTM1-205ENST00000586915 ERICH3Q5RHP9 1530 aa29.71■■■□□ 2.35
CLPTM1-205ENST00000586915 ADAMTS12P58397 1594 aa29.71■■■□□ 2.35
CLPTM1-205ENST00000586915 FBLN2P98095 1184 aa29.68■■■□□ 2.34
CLPTM1-205ENST00000586915 CHMP7Q8WUX9 453 aaPredicted RBP29.63■■■□□ 2.33
CLPTM1-205ENST00000586915 CLASP1Q7Z460 1538 aa29.6■■■□□ 2.33
CLPTM1-205ENST00000586915 FHAD1B1AJZ9 1412 aa29.58■■■□□ 2.33
CLPTM1-205ENST00000586915 GRIN2AQ12879 1464 aa29.57■■■□□ 2.32
CLPTM1-205ENST00000586915 KIF27Q86VH2 1401 aa29.57■■■□□ 2.32
CLPTM1-205ENST00000586915 RIMBP3CA6NJZ7 1639 aa29.53■■■□□ 2.32
CLPTM1-205ENST00000586915 RIMBP3BA6NNM3 1639 aa29.53■■■□□ 2.32
CLPTM1-205ENST00000586915 RIMBP3Q9UFD9 1639 aa29.53■■■□□ 2.32
CLPTM1-205ENST00000586915 ARHGEF11O15085 1522 aa29.52■■■□□ 2.32
CLPTM1-205ENST00000586915 CUL7Q14999 1698 aa29.47■■■□□ 2.31
CLPTM1-205ENST00000586915 NUP160Q12769 1436 aa29.45■■■□□ 2.3
CLPTM1-205ENST00000586915 CEP170Q5SW79 1584 aa29.43■■■□□ 2.3
CLPTM1-205ENST00000586915 IGF1RP08069 1367 aa29.39■■■□□ 2.3
CLPTM1-205ENST00000586915 TRIM41Q8WV44 630 aa29.33■■■□□ 2.29
CLPTM1-205ENST00000586915 RUSC2Q8N2Y8 1516 aa29.28■■■□□ 2.28
CLPTM1-205ENST00000586915 ARAP1Q96P48 1450 aa29.28■■■□□ 2.28
CLPTM1-205ENST00000586915 SHROOM2Q13796 1616 aa29.27■■■□□ 2.28
CLPTM1-205ENST00000586915 CARMIL1Q5VZK9 1371 aa29.24■■■□□ 2.27
CLPTM1-205ENST00000586915 KIAA0586Q9BVV6 1533 aa29.13■■■□□ 2.25
CLPTM1-205ENST00000586915 ERCC6L2Q5T890 1561 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms