RNA–Protein interactions for RNA: ENST00000586776.1

PALM-204, Transcript of paralemmin, humanhuman

TSL 4

Gene PALM, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM-204ENST00000586776 NISCHQ9Y2I1 1504 aa43.29■■■■■ 4.52
PALM-204ENST00000586776 CCDC180Q9P1Z9 1646 aa38.86■■■■□ 3.81
PALM-204ENST00000586776 ABCC9O60706 1549 aa38.8■■■■□ 3.8
PALM-204ENST00000586776 RB1CC1Q8TDY2 1594 aa36.93■■■■□ 3.5
PALM-204ENST00000586776 NACADO15069 1562 aa36.69■■■■□ 3.46
PALM-204ENST00000586776 DCAF8L2P0C7V8 631 aa36.4■■■■□ 3.42
PALM-204ENST00000586776 DNAJC5BQ9UF47 199 aa36.39■■■■□ 3.42
PALM-204ENST00000586776 UNC13AQ9UPW8 1703 aa36.22■■■■□ 3.39
PALM-204ENST00000586776 MYO15BQ96JP2 1530 aa36.19■■■■□ 3.38
PALM-204ENST00000586776 PABPN1Q86U42 306 aaKnown RBP eCLIP36.09■■■■□ 3.37
PALM-204ENST00000586776 BICRAQ9NZM4 1560 aa35.93■■■■□ 3.34
PALM-204ENST00000586776 ZCCHC6Q5VYS8 1495 aaKnown RBP35.91■■■■□ 3.34
PALM-204ENST00000586776 DCAF1Q9Y4B6 1507 aa35.75■■■■□ 3.31
PALM-204ENST00000586776 SCRIBQ14160 1630 aa35.41■■■■□ 3.26
PALM-204ENST00000586776 SHROOM4Q9ULL8 1493 aa35.36■■■■□ 3.25
PALM-204ENST00000586776 CC2D2AQ9P2K1 1620 aa35.08■■■■□ 3.21
PALM-204ENST00000586776 EIF4G1Q04637 1599 aaKnown RBP35■■■■□ 3.19
PALM-204ENST00000586776 CECR2Q9BXF3 1484 aa34.93■■■■□ 3.18
PALM-204ENST00000586776 NCAPD3P42695 1498 aa33.86■■■■□ 3.01
PALM-204ENST00000586776 SMARCA4P51532 1647 aa33.79■■■■□ 3
PALM-204ENST00000586776 ATAD2BQ9ULI0 1458 aa33.78■■■■□ 3
PALM-204ENST00000586776 SMARCA2P51531 1590 aa33.67■■■□□ 2.98
PALM-204ENST00000586776 HMGXB3Q12766 1538 aa33.64■■■□□ 2.98
PALM-204ENST00000586776 BAZ1AQ9NRL2 1556 aaPredicted RBP33.58■■■□□ 2.97
PALM-204ENST00000586776 PEG3Q9GZU2 1588 aa33.46■■■□□ 2.95
PALM-204ENST00000586776 ERCC6Q03468 1493 aa33.44■■■□□ 2.94
PALM-204ENST00000586776 BAZ1BQ9UIG0 1483 aaKnown RBP33.44■■■□□ 2.94
PALM-204ENST00000586776 CUX2O14529 1486 aa33.39■■■□□ 2.94
PALM-204ENST00000586776 MROH2BQ7Z745 1585 aa33.38■■■□□ 2.93
PALM-204ENST00000586776 NESP48681 1621 aa33.37■■■□□ 2.93
PALM-204ENST00000586776 DNAJC5Q9H3Z4 198 aa33.32■■■□□ 2.92
PALM-204ENST00000586776 LAMC3Q9Y6N6 1575 aa33.11■■■□□ 2.89
PALM-204ENST00000586776 THOC2Q8NI27 1593 aaKnown RBP33.05■■■□□ 2.88
PALM-204ENST00000586776 WIZO95785 1651 aa33.01■■■□□ 2.87
PALM-204ENST00000586776 KIF21AQ7Z4S6 1674 aa32.97■■■□□ 2.87
PALM-204ENST00000586776 PDS5BQ9NTI5 1447 aa32.85■■■□□ 2.85
PALM-204ENST00000586776 CADPSQ9ULU8 1353 aa32.82■■■□□ 2.84
PALM-204ENST00000586776 RSF1Q96T23 1441 aaPredicted RBP32.67■■■□□ 2.82
PALM-204ENST00000586776 MRC2Q9UBG0 1479 aa32.62■■■□□ 2.81
PALM-204ENST00000586776 WDR62O43379 1518 aa32.57■■■□□ 2.8
PALM-204ENST00000586776 TOP2AP11388 1531 aaKnown RBP32.56■■■□□ 2.8
PALM-204ENST00000586776 CEP164Q9UPV0 1460 aa32.48■■■□□ 2.79
PALM-204ENST00000586776 CFTRP13569 1480 aa32.48■■■□□ 2.79
PALM-204ENST00000586776 FANCD2Q9BXW9 1451 aa32.47■■■□□ 2.79
PALM-204ENST00000586776 URB2Q14146 1524 aaKnown RBP32.24■■■□□ 2.75
PALM-204ENST00000586776 PRDM2Q13029 1718 aa32.23■■■□□ 2.75
PALM-204ENST00000586776 CCDC88BA6NC98 1476 aa32.17■■■□□ 2.74
PALM-204ENST00000586776 TOPBP1Q92547 1522 aa31.88■■■□□ 2.69
PALM-204ENST00000586776 TRIM41Q8WV44 630 aa31.85■■■□□ 2.69
PALM-204ENST00000586776 ZNF608Q9ULD9 1512 aaPredicted RBP31.84■■■□□ 2.69
PALM-204ENST00000586776 IFT140Q96RY7 1462 aa31.84■■■□□ 2.69
PALM-204ENST00000586776 OSCARQ8IYS5 282 aa31.81■■■□□ 2.68
PALM-204ENST00000586776 DNMBPQ6XZF7 1577 aa31.77■■■□□ 2.68
PALM-204ENST00000586776 ABCC8Q09428 1581 aa31.74■■■□□ 2.67
PALM-204ENST00000586776 EIF4G3O43432 1585 aaKnown RBP31.68■■■□□ 2.66
PALM-204ENST00000586776 TARBP1Q13395 1621 aaKnown RBP31.63■■■□□ 2.65
PALM-204ENST00000586776 POLA1P09884 1462 aaPredicted RBP31.55■■■□□ 2.64
PALM-204ENST00000586776 RIMBP3CA6NJZ7 1639 aa31.52■■■□□ 2.64
PALM-204ENST00000586776 RIMBP3BA6NNM3 1639 aa31.52■■■□□ 2.64
PALM-204ENST00000586776 RIMBP3Q9UFD9 1639 aa31.52■■■□□ 2.64
PALM-204ENST00000586776 AQRO60306 1485 aaKnown RBP eCLIP31.52■■■□□ 2.64
PALM-204ENST00000586776 CHD1O14646 1710 aa31.46■■■□□ 2.63
PALM-204ENST00000586776 RAD54L2Q9Y4B4 1467 aa31.44■■■□□ 2.62
PALM-204ENST00000586776 ARHGEF11O15085 1522 aa31.4■■■□□ 2.62
PALM-204ENST00000586776 CUX1P39880 1505 aa31.36■■■□□ 2.61
PALM-204ENST00000586776 FGD5Q6ZNL6 1462 aa31.36■■■□□ 2.61
PALM-204ENST00000586776 SOGA1O94964 1423 aa31.36■■■□□ 2.61
PALM-204ENST00000586776 TDRD9Q8NDG6 1382 aaKnown RBP31.31■■■□□ 2.6
PALM-204ENST00000586776 WDR97A6NE52 1622 aa31.25■■■□□ 2.59
PALM-204ENST00000586776 FBLN2P98095 1184 aa31.22■■■□□ 2.59
PALM-204ENST00000586776 SNAPC4Q5SXM2 1469 aa31.21■■■□□ 2.59
PALM-204ENST00000586776 SUPT5HO00267 1087 aaKnown RBP31.18■■■□□ 2.58
PALM-204ENST00000586776 ARAP1Q96P48 1450 aa31.11■■■□□ 2.57
PALM-204ENST00000586776 GRIN2BQ13224 1484 aa31.1■■■□□ 2.57
PALM-204ENST00000586776 MAGI1Q96QZ7 1491 aaPredicted RBP31.1■■■□□ 2.57
PALM-204ENST00000586776 CYB5RLQ6IPT4 315 aa31.09■■■□□ 2.57
PALM-204ENST00000586776 CLASP1Q7Z460 1538 aa31.08■■■□□ 2.57
PALM-204ENST00000586776 PBRM1Q86U86 1689 aa31.06■■■□□ 2.56
PALM-204ENST00000586776 ABCA10Q8WWZ4 1543 aa31■■■□□ 2.55
PALM-204ENST00000586776 ABCA5Q8WWZ7 1642 aa31■■■□□ 2.55
PALM-204ENST00000586776 SYNJ2O15056 1496 aa31■■■□□ 2.55
PALM-204ENST00000586776 GAPVD1Q14C86 1478 aa31■■■□□ 2.55
PALM-204ENST00000586776 SYNJ1O43426 1573 aa31■■■□□ 2.55
PALM-204ENST00000586776 CHMP7Q8WUX9 453 aaPredicted RBP30.99■■■□□ 2.55
PALM-204ENST00000586776 BIVM-ERCC5R4GMW8 1640 aa30.88■■■□□ 2.53
PALM-204ENST00000586776 TOP2BQ02880 1626 aa30.86■■■□□ 2.53
PALM-204ENST00000586776 WRNQ14191 1432 aaPredicted RBP eCLIP30.83■■■□□ 2.53
PALM-204ENST00000586776 ADAMTS12P58397 1594 aa30.75■■■□□ 2.51
PALM-204ENST00000586776 GRIN2AQ12879 1464 aa30.72■■■□□ 2.51
PALM-204ENST00000586776 TRHP20396 242 aaPredicted RBP30.69■■■□□ 2.5
PALM-204ENST00000586776 CEP170Q5SW79 1584 aa30.66■■■□□ 2.5
PALM-204ENST00000586776 NUP160Q12769 1436 aa30.63■■■□□ 2.49
PALM-204ENST00000586776 ERCC6L2Q5T890 1561 aa30.62■■■□□ 2.49
PALM-204ENST00000586776 FHAD1B1AJZ9 1412 aa30.6■■■□□ 2.49
PALM-204ENST00000586776 ERICH3Q5RHP9 1530 aa30.6■■■□□ 2.49
PALM-204ENST00000586776 SHROOM2Q13796 1616 aa30.53■■■□□ 2.48
PALM-204ENST00000586776 RUSC2Q8N2Y8 1516 aa30.32■■■□□ 2.44
PALM-204ENST00000586776 PRG4Q92954 1404 aaPredicted RBP30.3■■■□□ 2.44
PALM-204ENST00000586776 JPH4Q96JJ6 628 aa30.24■■■□□ 2.43
PALM-204ENST00000586776 IGF1RP08069 1367 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms