RNA–Protein interactions for RNA: ENST00000586690.1

PPP6R1-202, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-202ENST00000586690 NISCHQ9Y2I1 1504 aa29.82■■■□□ 2.36
PPP6R1-202ENST00000586690 CCDC180Q9P1Z9 1646 aa26.49■■□□□ 1.83
PPP6R1-202ENST00000586690 ABCC9O60706 1549 aa25.63■■□□□ 1.69
PPP6R1-202ENST00000586690 ZCCHC6Q5VYS8 1495 aaKnown RBP24.9■■□□□ 1.58
PPP6R1-202ENST00000586690 NACADO15069 1562 aa24.82■■□□□ 1.56
PPP6R1-202ENST00000586690 RB1CC1Q8TDY2 1594 aa24.8■■□□□ 1.56
PPP6R1-202ENST00000586690 MYO15BQ96JP2 1530 aa24.76■■□□□ 1.55
PPP6R1-202ENST00000586690 DCAF1Q9Y4B6 1507 aa24.73■■□□□ 1.55
PPP6R1-202ENST00000586690 DCAF8L2P0C7V8 631 aa24.7■■□□□ 1.54
PPP6R1-202ENST00000586690 UNC13AQ9UPW8 1703 aa24.26■■□□□ 1.47
PPP6R1-202ENST00000586690 SCRIBQ14160 1630 aa24.11■■□□□ 1.45
PPP6R1-202ENST00000586690 BICRAQ9NZM4 1560 aa24.04■■□□□ 1.44
PPP6R1-202ENST00000586690 PABPN1Q86U42 306 aaKnown RBP eCLIP23.93■■□□□ 1.421e-9■□□□□ 10.5
PPP6R1-202ENST00000586690 SHROOM4Q9ULL8 1493 aa23.84■■□□□ 1.41
PPP6R1-202ENST00000586690 EIF4G1Q04637 1599 aaKnown RBP23.38■■□□□ 1.33
PPP6R1-202ENST00000586690 DNAJC5BQ9UF47 199 aa23.32■■□□□ 1.32
PPP6R1-202ENST00000586690 CC2D2AQ9P2K1 1620 aa23.23■■□□□ 1.31
PPP6R1-202ENST00000586690 CECR2Q9BXF3 1484 aa23.18■■□□□ 1.3
PPP6R1-202ENST00000586690 SMARCA4P51532 1647 aa23.11■■□□□ 1.29
PPP6R1-202ENST00000586690 BAZ1AQ9NRL2 1556 aaPredicted RBP23.11■■□□□ 1.29
PPP6R1-202ENST00000586690 MROH2BQ7Z745 1585 aa22.97■■□□□ 1.27
PPP6R1-202ENST00000586690 ATAD2BQ9ULI0 1458 aa22.92■■□□□ 1.26
PPP6R1-202ENST00000586690 SMARCA2P51531 1590 aa22.91■■□□□ 1.26
PPP6R1-202ENST00000586690 PEG3Q9GZU2 1588 aa22.91■■□□□ 1.26
PPP6R1-202ENST00000586690 NCAPD3P42695 1498 aa22.89■■□□□ 1.25
PPP6R1-202ENST00000586690 HMGXB3Q12766 1538 aa22.82■■□□□ 1.24
PPP6R1-202ENST00000586690 RSF1Q96T23 1441 aaPredicted RBP22.77■■□□□ 1.24
PPP6R1-202ENST00000586690 WIZO95785 1651 aa22.74■■□□□ 1.23
PPP6R1-202ENST00000586690 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
PPP6R1-202ENST00000586690 TOP2AP11388 1531 aaKnown RBP22.53■■□□□ 1.2
PPP6R1-202ENST00000586690 LAMC3Q9Y6N6 1575 aa22.26■■□□□ 1.15
PPP6R1-202ENST00000586690 SUPT5HO00267 1087 aaKnown RBP22.25■■□□□ 1.15
PPP6R1-202ENST00000586690 NESP48681 1621 aa22.24■■□□□ 1.15
PPP6R1-202ENST00000586690 CCDC88BA6NC98 1476 aa22.23■■□□□ 1.15
PPP6R1-202ENST00000586690 CADPSQ9ULU8 1353 aa22.2■■□□□ 1.14
PPP6R1-202ENST00000586690 CFTRP13569 1480 aa22.14■■□□□ 1.13
PPP6R1-202ENST00000586690 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
PPP6R1-202ENST00000586690 ERCC6Q03468 1493 aa22.06■■□□□ 1.12
PPP6R1-202ENST00000586690 PRDM2Q13029 1718 aa22.04■■□□□ 1.12
PPP6R1-202ENST00000586690 KIF21AQ7Z4S6 1674 aa22.03■■□□□ 1.12
PPP6R1-202ENST00000586690 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
PPP6R1-202ENST00000586690 THOC2Q8NI27 1593 aaKnown RBP21.92■■□□□ 1.1
PPP6R1-202ENST00000586690 CEP164Q9UPV0 1460 aa21.91■■□□□ 1.1
PPP6R1-202ENST00000586690 MRC2Q9UBG0 1479 aa21.85■■□□□ 1.09
PPP6R1-202ENST00000586690 CUX2O14529 1486 aa21.81■■□□□ 1.08
PPP6R1-202ENST00000586690 WDR62O43379 1518 aa21.8■■□□□ 1.08
PPP6R1-202ENST00000586690 URB2Q14146 1524 aaKnown RBP21.73■■□□□ 1.07
PPP6R1-202ENST00000586690 ABCC8Q09428 1581 aa21.66■■□□□ 1.06
PPP6R1-202ENST00000586690 DNMBPQ6XZF7 1577 aa21.65■■□□□ 1.06
PPP6R1-202ENST00000586690 TOPBP1Q92547 1522 aa21.64■■□□□ 1.05
PPP6R1-202ENST00000586690 CUX1P39880 1505 aa21.55■■□□□ 1.04
PPP6R1-202ENST00000586690 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
PPP6R1-202ENST00000586690 POLA1P09884 1462 aaPredicted RBP21.46■■□□□ 1.03
PPP6R1-202ENST00000586690 IFT140Q96RY7 1462 aa21.45■■□□□ 1.03
PPP6R1-202ENST00000586690 BIVM-ERCC5R4GMW8 1640 aa21.45■■□□□ 1.02
PPP6R1-202ENST00000586690 FGD5Q6ZNL6 1462 aa21.44■■□□□ 1.02
PPP6R1-202ENST00000586690 TOP2BQ02880 1626 aa21.44■■□□□ 1.02
PPP6R1-202ENST00000586690 SYNJ1O43426 1573 aa21.43■■□□□ 1.02
PPP6R1-202ENST00000586690 TARBP1Q13395 1621 aaKnown RBP21.41■■□□□ 1.02
PPP6R1-202ENST00000586690 SOGA1O94964 1423 aa21.36■■□□□ 1.01
PPP6R1-202ENST00000586690 RAD54L2Q9Y4B4 1467 aa21.34■■□□□ 1.01
PPP6R1-202ENST00000586690 ZNF608Q9ULD9 1512 aaPredicted RBP21.32■■□□□ 1
PPP6R1-202ENST00000586690 WDR97A6NE52 1622 aa21.31■■□□□ 1
PPP6R1-202ENST00000586690 EIF4G3O43432 1585 aaKnown RBP21.28■■□□□ 1
PPP6R1-202ENST00000586690 ABCA10Q8WWZ4 1543 aa21.25■□□□□ 0.99
PPP6R1-202ENST00000586690 AQRO60306 1485 aaKnown RBP eCLIP21.2■□□□□ 0.981e-7■■■■□ 21.1
PPP6R1-202ENST00000586690 TDRD9Q8NDG6 1382 aaKnown RBP21.19■□□□□ 0.98
PPP6R1-202ENST00000586690 ABCA5Q8WWZ7 1642 aa21.18■□□□□ 0.98
PPP6R1-202ENST00000586690 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
PPP6R1-202ENST00000586690 PBRM1Q86U86 1689 aa21.11■□□□□ 0.97
PPP6R1-202ENST00000586690 GRIN2BQ13224 1484 aa21.1■□□□□ 0.97
PPP6R1-202ENST00000586690 TRIM41Q8WV44 630 aa21.04■□□□□ 0.96
PPP6R1-202ENST00000586690 SNAPC4Q5SXM2 1469 aa21.04■□□□□ 0.96
PPP6R1-202ENST00000586690 MAGI1Q96QZ7 1491 aaPredicted RBP21.04■□□□□ 0.96
PPP6R1-202ENST00000586690 ERICH3Q5RHP9 1530 aa21.01■□□□□ 0.95
PPP6R1-202ENST00000586690 KIF27Q86VH2 1401 aa21■□□□□ 0.95
PPP6R1-202ENST00000586690 CHD1O14646 1710 aa20.98■□□□□ 0.95
PPP6R1-202ENST00000586690 ADAMTS12P58397 1594 aa20.95■□□□□ 0.94
PPP6R1-202ENST00000586690 SYNJ2O15056 1496 aa20.94■□□□□ 0.94
PPP6R1-202ENST00000586690 CHIC1Q5VXU3 224 aa20.92■□□□□ 0.94
PPP6R1-202ENST00000586690 FHAD1B1AJZ9 1412 aa20.89■□□□□ 0.94
PPP6R1-202ENST00000586690 IGF1RP08069 1367 aa20.88■□□□□ 0.93
PPP6R1-202ENST00000586690 OSCARQ8IYS5 282 aa20.88■□□□□ 0.93
PPP6R1-202ENST00000586690 CUL7Q14999 1698 aa20.87■□□□□ 0.93
PPP6R1-202ENST00000586690 CHMP7Q8WUX9 453 aaPredicted RBP20.86■□□□□ 0.93
PPP6R1-202ENST00000586690 DNAJC5Q9H3Z4 198 aa20.86■□□□□ 0.93
PPP6R1-202ENST00000586690 RUSC2Q8N2Y8 1516 aa20.86■□□□□ 0.93
PPP6R1-202ENST00000586690 FBLN2P98095 1184 aa20.85■□□□□ 0.93
PPP6R1-202ENST00000586690 GRIN2AQ12879 1464 aa20.83■□□□□ 0.93
PPP6R1-202ENST00000586690 CLASP1Q7Z460 1538 aa20.76■□□□□ 0.91
PPP6R1-202ENST00000586690 EEA1Q15075 1411 aa20.76■□□□□ 0.91
PPP6R1-202ENST00000586690 CARMIL1Q5VZK9 1371 aa20.75■□□□□ 0.91
PPP6R1-202ENST00000586690 NUP160Q12769 1436 aa20.75■□□□□ 0.91
PPP6R1-202ENST00000586690 CEP170Q5SW79 1584 aa20.73■□□□□ 0.91
PPP6R1-202ENST00000586690 RAPGEF2Q9Y4G8 1499 aa20.68■□□□□ 0.9
PPP6R1-202ENST00000586690 PRXQ9BXM0 1461 aa20.67■□□□□ 0.9
PPP6R1-202ENST00000586690 CSRNP3Q8WYN3 585 aa20.64■□□□□ 0.89
PPP6R1-202ENST00000586690 SHROOM2Q13796 1616 aa20.6■□□□□ 0.89
PPP6R1-202ENST00000586690 ARHGEF11O15085 1522 aa20.59■□□□□ 0.89
PPP6R1-202ENST00000586690 KIAA0586Q9BVV6 1533 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms