RNA–Protein interactions for RNA: ENST00000586613.1

TK1-202, Transcript of thymidine kinase 1, humanhuman

TSL 3

Gene TK1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TK1-202ENST00000586613 NISCHQ9Y2I1 1504 aa41.93■■■■■ 4.3
TK1-202ENST00000586613 CCDC180Q9P1Z9 1646 aa37.28■■■■□ 3.56
TK1-202ENST00000586613 ABCC9O60706 1549 aa36.69■■■■□ 3.46
TK1-202ENST00000586613 RB1CC1Q8TDY2 1594 aa35.21■■■■□ 3.23
TK1-202ENST00000586613 DCAF8L2P0C7V8 631 aa35.15■■■■□ 3.22
TK1-202ENST00000586613 NACADO15069 1562 aa35.15■■■■□ 3.22
TK1-202ENST00000586613 MYO15BQ96JP2 1530 aa34.91■■■■□ 3.18
TK1-202ENST00000586613 ZCCHC6Q5VYS8 1495 aaKnown RBP34.87■■■■□ 3.17
TK1-202ENST00000586613 DCAF1Q9Y4B6 1507 aa34.7■■■■□ 3.14
TK1-202ENST00000586613 UNC13AQ9UPW8 1703 aa34.33■■■■□ 3.09
TK1-202ENST00000586613 PABPN1Q86U42 306 aaKnown RBP eCLIP34.3■■■■□ 3.08
TK1-202ENST00000586613 BICRAQ9NZM4 1560 aa34.15■■■■□ 3.06
TK1-202ENST00000586613 SCRIBQ14160 1630 aa34.01■■■■□ 3.03
TK1-202ENST00000586613 DNAJC5BQ9UF47 199 aa33.89■■■■□ 3.02
TK1-202ENST00000586613 SHROOM4Q9ULL8 1493 aa33.8■■■■□ 3
TK1-202ENST00000586613 EIF4G1Q04637 1599 aaKnown RBP33.26■■■□□ 2.91
TK1-202ENST00000586613 CC2D2AQ9P2K1 1620 aa33.15■■■□□ 2.9
TK1-202ENST00000586613 CECR2Q9BXF3 1484 aa32.99■■■□□ 2.87
TK1-202ENST00000586613 SMARCA4P51532 1647 aa32.53■■■□□ 2.8
TK1-202ENST00000586613 BAZ1AQ9NRL2 1556 aaPredicted RBP32.49■■■□□ 2.79
TK1-202ENST00000586613 NCAPD3P42695 1498 aa32.48■■■□□ 2.79
TK1-202ENST00000586613 ATAD2BQ9ULI0 1458 aa32.44■■■□□ 2.78
TK1-202ENST00000586613 SMARCA2P51531 1590 aa32.38■■■□□ 2.77
TK1-202ENST00000586613 MROH2BQ7Z745 1585 aa32.3■■■□□ 2.76
TK1-202ENST00000586613 PEG3Q9GZU2 1588 aa32.24■■■□□ 2.75
TK1-202ENST00000586613 HMGXB3Q12766 1538 aa32.24■■■□□ 2.75
TK1-202ENST00000586613 BAZ1BQ9UIG0 1483 aaKnown RBP32.15■■■□□ 2.74
TK1-202ENST00000586613 WIZO95785 1651 aa31.91■■■□□ 2.7
TK1-202ENST00000586613 RSF1Q96T23 1441 aaPredicted RBP31.91■■■□□ 2.7
TK1-202ENST00000586613 NESP48681 1621 aa31.69■■■□□ 2.66
TK1-202ENST00000586613 ERCC6Q03468 1493 aa31.64■■■□□ 2.66
TK1-202ENST00000586613 LAMC3Q9Y6N6 1575 aa31.59■■■□□ 2.65
TK1-202ENST00000586613 TOP2AP11388 1531 aaKnown RBP31.58■■■□□ 2.65
TK1-202ENST00000586613 CADPSQ9ULU8 1353 aa31.53■■■□□ 2.64
TK1-202ENST00000586613 PDS5BQ9NTI5 1447 aa31.43■■■□□ 2.62
TK1-202ENST00000586613 CUX2O14529 1486 aa31.37■■■□□ 2.61
TK1-202ENST00000586613 CFTRP13569 1480 aa31.28■■■□□ 2.6
TK1-202ENST00000586613 CCDC88BA6NC98 1476 aa31.25■■■□□ 2.59
TK1-202ENST00000586613 KIF21AQ7Z4S6 1674 aa31.25■■■□□ 2.59
TK1-202ENST00000586613 THOC2Q8NI27 1593 aaKnown RBP31.2■■■□□ 2.58
TK1-202ENST00000586613 FANCD2Q9BXW9 1451 aa31.13■■■□□ 2.57
TK1-202ENST00000586613 MRC2Q9UBG0 1479 aa31.08■■■□□ 2.57
TK1-202ENST00000586613 CEP164Q9UPV0 1460 aa31.08■■■□□ 2.57
TK1-202ENST00000586613 SUPT5HO00267 1087 aaKnown RBP31■■■□□ 2.55
TK1-202ENST00000586613 WDR62O43379 1518 aa30.97■■■□□ 2.55
TK1-202ENST00000586613 PRDM2Q13029 1718 aa30.91■■■□□ 2.54
TK1-202ENST00000586613 URB2Q14146 1524 aaKnown RBP30.81■■■□□ 2.52
TK1-202ENST00000586613 DNAJC5Q9H3Z4 198 aa30.67■■■□□ 2.5
TK1-202ENST00000586613 ABCC8Q09428 1581 aa30.62■■■□□ 2.49
TK1-202ENST00000586613 TOPBP1Q92547 1522 aa30.6■■■□□ 2.49
TK1-202ENST00000586613 DNMBPQ6XZF7 1577 aa30.54■■■□□ 2.48
TK1-202ENST00000586613 IFT140Q96RY7 1462 aa30.47■■■□□ 2.47
TK1-202ENST00000586613 POLA1P09884 1462 aaPredicted RBP30.33■■■□□ 2.45
TK1-202ENST00000586613 ZNF608Q9ULD9 1512 aaPredicted RBP30.32■■■□□ 2.44
TK1-202ENST00000586613 CUX1P39880 1505 aa30.3■■■□□ 2.44
TK1-202ENST00000586613 TARBP1Q13395 1621 aaKnown RBP30.26■■■□□ 2.44
TK1-202ENST00000586613 SOGA1O94964 1423 aa30.24■■■□□ 2.43
TK1-202ENST00000586613 FGD5Q6ZNL6 1462 aa30.23■■■□□ 2.43
TK1-202ENST00000586613 RAD54L2Q9Y4B4 1467 aa30.21■■■□□ 2.43
TK1-202ENST00000586613 AQRO60306 1485 aaKnown RBP eCLIP30.16■■■□□ 2.423e-7■■■■□ 22.8
TK1-202ENST00000586613 EIF4G3O43432 1585 aaKnown RBP30.15■■■□□ 2.42
TK1-202ENST00000586613 OSCARQ8IYS5 282 aa30.11■■■□□ 2.41
TK1-202ENST00000586613 TDRD9Q8NDG6 1382 aaKnown RBP30.1■■■□□ 2.41
TK1-202ENST00000586613 WRNQ14191 1432 aaPredicted RBP eCLIP30.08■■■□□ 2.41
TK1-202ENST00000586613 WDR97A6NE52 1622 aa30.01■■■□□ 2.39
TK1-202ENST00000586613 TOP2BQ02880 1626 aa30■■■□□ 2.39
TK1-202ENST00000586613 BIVM-ERCC5R4GMW8 1640 aa29.96■■■□□ 2.39
TK1-202ENST00000586613 SYNJ1O43426 1573 aa29.96■■■□□ 2.39
TK1-202ENST00000586613 ABCA10Q8WWZ4 1543 aa29.95■■■□□ 2.38
TK1-202ENST00000586613 GRIN2BQ13224 1484 aa29.89■■■□□ 2.38
TK1-202ENST00000586613 GAPVD1Q14C86 1478 aa29.87■■■□□ 2.37
TK1-202ENST00000586613 FBLN2P98095 1184 aa29.85■■■□□ 2.37
TK1-202ENST00000586613 SNAPC4Q5SXM2 1469 aa29.84■■■□□ 2.37
TK1-202ENST00000586613 MAGI1Q96QZ7 1491 aaPredicted RBP29.81■■■□□ 2.36
TK1-202ENST00000586613 ABCA5Q8WWZ7 1642 aa29.79■■■□□ 2.36
TK1-202ENST00000586613 CHD1O14646 1710 aa29.77■■■□□ 2.36
TK1-202ENST00000586613 CHMP7Q8WUX9 453 aaPredicted RBP29.76■■■□□ 2.35
TK1-202ENST00000586613 PBRM1Q86U86 1689 aa29.72■■■□□ 2.35
TK1-202ENST00000586613 SYNJ2O15056 1496 aa29.71■■■□□ 2.35
TK1-202ENST00000586613 ERICH3Q5RHP9 1530 aa29.58■■■□□ 2.33
TK1-202ENST00000586613 TRIM41Q8WV44 630 aa29.54■■■□□ 2.32
TK1-202ENST00000586613 ARHGEF11O15085 1522 aa29.54■■■□□ 2.32
TK1-202ENST00000586613 RIMBP3CA6NJZ7 1639 aa29.53■■■□□ 2.32
TK1-202ENST00000586613 RIMBP3BA6NNM3 1639 aa29.53■■■□□ 2.32
TK1-202ENST00000586613 RIMBP3Q9UFD9 1639 aa29.53■■■□□ 2.32
TK1-202ENST00000586613 FHAD1B1AJZ9 1412 aa29.53■■■□□ 2.32
TK1-202ENST00000586613 ADAMTS12P58397 1594 aa29.52■■■□□ 2.32
TK1-202ENST00000586613 CLASP1Q7Z460 1538 aa29.5■■■□□ 2.31
TK1-202ENST00000586613 GRIN2AQ12879 1464 aa29.48■■■□□ 2.31
TK1-202ENST00000586613 KIF27Q86VH2 1401 aa29.47■■■□□ 2.31
TK1-202ENST00000586613 IGF1RP08069 1367 aa29.41■■■□□ 2.3
TK1-202ENST00000586613 NUP160Q12769 1436 aa29.38■■■□□ 2.29
TK1-202ENST00000586613 CYB5RLQ6IPT4 315 aa29.35■■■□□ 2.29
TK1-202ENST00000586613 CEP170Q5SW79 1584 aa29.32■■■□□ 2.28
TK1-202ENST00000586613 ARAP1Q96P48 1450 aa29.29■■■□□ 2.28
TK1-202ENST00000586613 CUL7Q14999 1698 aa29.24■■■□□ 2.27
TK1-202ENST00000586613 CARMIL1Q5VZK9 1371 aa29.22■■■□□ 2.27
TK1-202ENST00000586613 JPH4Q96JJ6 628 aa29.14■■■□□ 2.26
TK1-202ENST00000586613 RUSC2Q8N2Y8 1516 aa29.14■■■□□ 2.25
TK1-202ENST00000586613 SHROOM2Q13796 1616 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms