RNA–Protein interactions for RNA: ENST00000586443.1

GRN-205, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 1,557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-205ENST00000586443 NISCHQ9Y2I1 1504 aa42.86■■■■■ 4.45
GRN-205ENST00000586443 CCDC180Q9P1Z9 1646 aa37.47■■■■□ 3.59
GRN-205ENST00000586443 ZCCHC6Q5VYS8 1495 aaKnown RBP36.02■■■■□ 3.36
GRN-205ENST00000586443 DCAF1Q9Y4B6 1507 aa35.53■■■■□ 3.28
GRN-205ENST00000586443 ABCC9O60706 1549 aa35.29■■■■□ 3.24
GRN-205ENST00000586443 DCAF8L2P0C7V8 631 aa35.21■■■■□ 3.23
GRN-205ENST00000586443 MYO15BQ96JP2 1530 aa35.15■■■■□ 3.22
GRN-205ENST00000586443 NACADO15069 1562 aa34.88■■■■□ 3.17
GRN-205ENST00000586443 SHROOM4Q9ULL8 1493 aa34.77■■■■□ 3.16
GRN-205ENST00000586443 RB1CC1Q8TDY2 1594 aa34.57■■■■□ 3.12
GRN-205ENST00000586443 SCRIBQ14160 1630 aa34.32■■■■□ 3.09
GRN-205ENST00000586443 UNC13AQ9UPW8 1703 aa33.84■■■■□ 3.01
GRN-205ENST00000586443 BICRAQ9NZM4 1560 aa33.49■■■□□ 2.95
GRN-205ENST00000586443 SUPT5HO00267 1087 aaKnown RBP33.45■■■□□ 2.95
GRN-205ENST00000586443 CECR2Q9BXF3 1484 aa33.25■■■□□ 2.91
GRN-205ENST00000586443 PABPN1Q86U42 306 aaKnown RBP eCLIP33.21■■■□□ 2.91
GRN-205ENST00000586443 RSF1Q96T23 1441 aaPredicted RBP33.21■■■□□ 2.91
GRN-205ENST00000586443 BAZ1AQ9NRL2 1556 aaPredicted RBP33.13■■■□□ 2.89
GRN-205ENST00000586443 MROH2BQ7Z745 1585 aa33.07■■■□□ 2.89
GRN-205ENST00000586443 SMARCA4P51532 1647 aa32.97■■■□□ 2.87
GRN-205ENST00000586443 WIZO95785 1651 aa32.79■■■□□ 2.84
GRN-205ENST00000586443 PEG3Q9GZU2 1588 aa32.63■■■□□ 2.81
GRN-205ENST00000586443 TOP2AP11388 1531 aaKnown RBP32.52■■■□□ 2.8
GRN-205ENST00000586443 EIF4G1Q04637 1599 aaKnown RBP32.48■■■□□ 2.79
GRN-205ENST00000586443 SMARCA2P51531 1590 aa32.43■■■□□ 2.78
GRN-205ENST00000586443 ATAD2BQ9ULI0 1458 aa32.41■■■□□ 2.78
GRN-205ENST00000586443 BAZ1BQ9UIG0 1483 aaKnown RBP32.23■■■□□ 2.75
GRN-205ENST00000586443 NCAPD3P42695 1498 aa32.17■■■□□ 2.74
GRN-205ENST00000586443 HMGXB3Q12766 1538 aa32.16■■■□□ 2.74
GRN-205ENST00000586443 CCDC88BA6NC98 1476 aa32.13■■■□□ 2.73
GRN-205ENST00000586443 CHIC1Q5VXU3 224 aa32.08■■■□□ 2.73
GRN-205ENST00000586443 CC2D2AQ9P2K1 1620 aa31.99■■■□□ 2.71
GRN-205ENST00000586443 TRIM41Q8WV44 630 aa31.52■■■□□ 2.64
GRN-205ENST00000586443 CFTRP13569 1480 aa31.44■■■□□ 2.62
GRN-205ENST00000586443 ABCC8Q09428 1581 aa31.41■■■□□ 2.62
GRN-205ENST00000586443 PRDM2Q13029 1718 aa31.32■■■□□ 2.6
GRN-205ENST00000586443 CADPSQ9ULU8 1353 aa31.31■■■□□ 2.6
GRN-205ENST00000586443 WRNQ14191 1432 aaPredicted RBP eCLIP31.28■■■□□ 2.6
GRN-205ENST00000586443 SYNJ1O43426 1573 aa31.13■■■□□ 2.57
GRN-205ENST00000586443 LAMC3Q9Y6N6 1575 aa31.1■■■□□ 2.57
GRN-205ENST00000586443 DNAJC5BQ9UF47 199 aa31.08■■■□□ 2.57
GRN-205ENST00000586443 TOP2BQ02880 1626 aa31.06■■■□□ 2.56
GRN-205ENST00000586443 BIVM-ERCC5R4GMW8 1640 aa31.04■■■□□ 2.56
GRN-205ENST00000586443 NESP48681 1621 aa30.97■■■□□ 2.55
GRN-205ENST00000586443 FANCD2Q9BXW9 1451 aa30.96■■■□□ 2.55
GRN-205ENST00000586443 CUX1P39880 1505 aa30.94■■■□□ 2.54
GRN-205ENST00000586443 EEA1Q15075 1411 aa30.88■■■□□ 2.53
GRN-205ENST00000586443 FAM9AQ8IZU1 332 aaPredicted RBP30.84■■■□□ 2.53
GRN-205ENST00000586443 SOGA1O94964 1423 aa30.82■■■□□ 2.52
GRN-205ENST00000586443 PDS5BQ9NTI5 1447 aa30.82■■■□□ 2.52
GRN-205ENST00000586443 CEP164Q9UPV0 1460 aa30.78■■■□□ 2.52
GRN-205ENST00000586443 LOC105371045A0A1W2PR82 267 aa30.76■■■□□ 2.52
GRN-205ENST00000586443 DNMBPQ6XZF7 1577 aa30.72■■■□□ 2.51
GRN-205ENST00000586443 RUSC2Q8N2Y8 1516 aa30.68■■■□□ 2.5
GRN-205ENST00000586443 KIF21AQ7Z4S6 1674 aa30.66■■■□□ 2.5
GRN-205ENST00000586443 TOPBP1Q92547 1522 aa30.63■■■□□ 2.49
GRN-205ENST00000586443 CSRNP3Q8WYN3 585 aa30.61■■■□□ 2.49
GRN-205ENST00000586443 FGD5Q6ZNL6 1462 aa30.61■■■□□ 2.49
GRN-205ENST00000586443 URB2Q14146 1524 aaKnown RBP30.57■■■□□ 2.48
GRN-205ENST00000586443 KIF27Q86VH2 1401 aa30.49■■■□□ 2.47
GRN-205ENST00000586443 POLA1P09884 1462 aaPredicted RBP30.47■■■□□ 2.47
GRN-205ENST00000586443 KIF21BO75037 1637 aa30.46■■■□□ 2.47
GRN-205ENST00000586443 MRC2Q9UBG0 1479 aa30.43■■■□□ 2.46
GRN-205ENST00000586443 GOLGA3Q08378 1498 aa30.4■■■□□ 2.46
GRN-205ENST00000586443 CUX2O14529 1486 aa30.38■■■□□ 2.45
GRN-205ENST00000586443 ABCA10Q8WWZ4 1543 aa30.38■■■□□ 2.45
GRN-205ENST00000586443 EHMT2Q96KQ7 1210 aa30.32■■■□□ 2.45
GRN-205ENST00000586443 RAD54L2Q9Y4B4 1467 aa30.32■■■□□ 2.44
GRN-205ENST00000586443 TNIKQ9UKE5 1360 aa30.3■■■□□ 2.44
GRN-205ENST00000586443 WDR62O43379 1518 aa30.29■■■□□ 2.44
GRN-205ENST00000586443 PRXQ9BXM0 1461 aa30.29■■■□□ 2.44
GRN-205ENST00000586443 WDR97A6NE52 1622 aa30.29■■■□□ 2.44
GRN-205ENST00000586443 ERCC6Q03468 1493 aa30.29■■■□□ 2.44
GRN-205ENST00000586443 ERICH3Q5RHP9 1530 aa30.28■■■□□ 2.44
GRN-205ENST00000586443 RAPGEF2Q9Y4G8 1499 aa30.22■■■□□ 2.43
GRN-205ENST00000586443 IGF1RP08069 1367 aa30.2■■■□□ 2.42
GRN-205ENST00000586443 THOC2Q8NI27 1593 aaKnown RBP30.19■■■□□ 2.42
GRN-205ENST00000586443 TARBP1Q13395 1621 aaKnown RBP30.19■■■□□ 2.42
GRN-205ENST00000586443 UBTFP17480 764 aaKnown RBP30.16■■■□□ 2.42
GRN-205ENST00000586443 ABCA5Q8WWZ7 1642 aa30.14■■■□□ 2.42
GRN-205ENST00000586443 CEP162Q5TB80 1403 aa30.1■■■□□ 2.41
GRN-205ENST00000586443 IFT140Q96RY7 1462 aa30.07■■■□□ 2.4
GRN-205ENST00000586443 CUL7Q14999 1698 aa30.05■■■□□ 2.4
GRN-205ENST00000586443 CARMIL1Q5VZK9 1371 aa30.05■■■□□ 2.4
GRN-205ENST00000586443 GAPVD1Q14C86 1478 aa30.03■■■□□ 2.4
GRN-205ENST00000586443 TDRD9Q8NDG6 1382 aaKnown RBP30.01■■■□□ 2.39
GRN-205ENST00000586443 PBRM1Q86U86 1689 aa29.89■■■□□ 2.38
GRN-205ENST00000586443 CLIP1P30622 1438 aa29.89■■■□□ 2.37
GRN-205ENST00000586443 AQRO60306 1485 aaKnown RBP eCLIP29.84■■■□□ 2.374e-6■■■■□ 21.9
GRN-205ENST00000586443 GRIN2BQ13224 1484 aa29.82■■■□□ 2.36
GRN-205ENST00000586443 ZNF608Q9ULD9 1512 aaPredicted RBP29.82■■■□□ 2.36
GRN-205ENST00000586443 EIF4G3O43432 1585 aaKnown RBP29.78■■■□□ 2.36
GRN-205ENST00000586443 ADAMTS12P58397 1594 aa29.74■■■□□ 2.35
GRN-205ENST00000586443 FHAD1B1AJZ9 1412 aa29.73■■■□□ 2.35
GRN-205ENST00000586443 CTTNBP2Q8WZ74 1663 aa29.69■■■□□ 2.34
GRN-205ENST00000586443 VPS8Q8N3P4 1428 aa29.64■■■□□ 2.34
GRN-205ENST00000586443 MAGI1Q96QZ7 1491 aaPredicted RBP29.61■■■□□ 2.33
GRN-205ENST00000586443 ARAP1Q96P48 1450 aa29.6■■■□□ 2.33
GRN-205ENST00000586443 ARHGAP35Q9NRY4 1499 aa29.6■■■□□ 2.33
GRN-205ENST00000586443 SNAPC4Q5SXM2 1469 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms