RNA–Protein interactions for RNA: ENST00000586344.5

RANBP3-206, Transcript of RAN binding protein 3, humanhuman

TSL 2

Gene RANBP3, Length 2,554 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-206ENST00000586344 NISCHQ9Y2I1 1504 aa28.03■■■□□ 2.08
RANBP3-206ENST00000586344 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
RANBP3-206ENST00000586344 ZCCHC6Q5VYS8 1495 aaKnown RBP23.54■■□□□ 1.36
RANBP3-206ENST00000586344 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
RANBP3-206ENST00000586344 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
RANBP3-206ENST00000586344 ABCC9O60706 1549 aa23.21■■□□□ 1.31
RANBP3-206ENST00000586344 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.29
RANBP3-206ENST00000586344 DCAF1Q9Y4B6 1507 aa23■■□□□ 1.27
RANBP3-206ENST00000586344 MYO15BQ96JP2 1530 aa22.65■■□□□ 1.22
RANBP3-206ENST00000586344 NACADO15069 1562 aa22.61■■□□□ 1.21
RANBP3-206ENST00000586344 SCRIBQ14160 1630 aa22.58■■□□□ 1.21
RANBP3-206ENST00000586344 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
RANBP3-206ENST00000586344 RB1CC1Q8TDY2 1594 aa22.44■■□□□ 1.18
RANBP3-206ENST00000586344 HRCP23327 699 aa22.09■■□□□ 1.13
RANBP3-206ENST00000586344 UNC13AQ9UPW8 1703 aa22.08■■□□□ 1.13
RANBP3-206ENST00000586344 PCGF6Q9BYE7 350 aa22.03■■□□□ 1.12
RANBP3-206ENST00000586344 PABPN1Q86U42 306 aaKnown RBP eCLIP22■■□□□ 1.118e-7■■□□□ 12.1
RANBP3-206ENST00000586344 CECR2Q9BXF3 1484 aa21.93■■□□□ 1.1
RANBP3-206ENST00000586344 LOC105371045A0A1W2PR82 267 aa21.93■■□□□ 1.1
RANBP3-206ENST00000586344 BICRAQ9NZM4 1560 aa21.85■■□□□ 1.09
RANBP3-206ENST00000586344 RSF1Q96T23 1441 aaPredicted RBP21.84■■□□□ 1.09
RANBP3-206ENST00000586344 MROH2BQ7Z745 1585 aa21.75■■□□□ 1.07
RANBP3-206ENST00000586344 PPARGC1BQ86YN6 1023 aaKnown RBP21.75■■□□□ 1.07
RANBP3-206ENST00000586344 BAZ1AQ9NRL2 1556 aaPredicted RBP21.6■■□□□ 1.05
RANBP3-206ENST00000586344 WIZO95785 1651 aa21.59■■□□□ 1.05
RANBP3-206ENST00000586344 SMARCA4P51532 1647 aa21.53■■□□□ 1.04
RANBP3-206ENST00000586344 TRIM26Q12899 539 aaPredicted RBP21.46■■□□□ 1.03
RANBP3-206ENST00000586344 TRIM41Q8WV44 630 aa21.41■■□□□ 1.02
RANBP3-206ENST00000586344 FAM9AQ8IZU1 332 aaPredicted RBP21.35■■□□□ 1.01
RANBP3-206ENST00000586344 EHMT2Q96KQ7 1210 aa21.25■□□□□ 0.99
RANBP3-206ENST00000586344 TOP2AP11388 1531 aaKnown RBP21.23■□□□□ 0.99
RANBP3-206ENST00000586344 EIF4G1Q04637 1599 aaKnown RBP21.2■□□□□ 0.98
RANBP3-206ENST00000586344 ATAD2BQ9ULI0 1458 aa21.19■□□□□ 0.98
RANBP3-206ENST00000586344 PEG3Q9GZU2 1588 aa21.16■□□□□ 0.98
RANBP3-206ENST00000586344 CCDC88BA6NC98 1476 aa21.12■□□□□ 0.97
RANBP3-206ENST00000586344 SMARCA2P51531 1590 aa21.1■□□□□ 0.97
RANBP3-206ENST00000586344 BAZ1BQ9UIG0 1483 aaKnown RBP21.08■□□□□ 0.97
RANBP3-206ENST00000586344 ZEB1P37275 1124 aaPredicted RBP20.98■□□□□ 0.95
RANBP3-206ENST00000586344 NCAPD3P42695 1498 aa20.93■□□□□ 0.94
RANBP3-206ENST00000586344 CC2D2AQ9P2K1 1620 aa20.9■□□□□ 0.94
RANBP3-206ENST00000586344 HMGXB3Q12766 1538 aa20.86■□□□□ 0.93
RANBP3-206ENST00000586344 ABCC8Q09428 1581 aa20.8■□□□□ 0.92
RANBP3-206ENST00000586344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.68■□□□□ 0.9
RANBP3-206ENST00000586344 DNAJC5BQ9UF47 199 aa20.64■□□□□ 0.89
RANBP3-206ENST00000586344 TTBK1Q5TCY1 1321 aaPredicted RBP20.58■□□□□ 0.89
RANBP3-206ENST00000586344 CCER1Q8TC90 406 aaPredicted RBP20.56■□□□□ 0.88
RANBP3-206ENST00000586344 WRNQ14191 1432 aaPredicted RBP eCLIP20.55■□□□□ 0.88
RANBP3-206ENST00000586344 SCAF1Q9H7N4 1312 aaKnown RBP20.54■□□□□ 0.88
RANBP3-206ENST00000586344 SOGA1O94964 1423 aa20.53■□□□□ 0.88
RANBP3-206ENST00000586344 CFTRP13569 1480 aa20.52■□□□□ 0.88
RANBP3-206ENST00000586344 SYNJ1O43426 1573 aa20.49■□□□□ 0.87
RANBP3-206ENST00000586344 CEP162Q5TB80 1403 aa20.46■□□□□ 0.87
RANBP3-206ENST00000586344 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
RANBP3-206ENST00000586344 RUSC2Q8N2Y8 1516 aa20.44■□□□□ 0.86
RANBP3-206ENST00000586344 NESP48681 1621 aa20.42■□□□□ 0.86
RANBP3-206ENST00000586344 CSRNP3Q8WYN3 585 aa20.41■□□□□ 0.86
RANBP3-206ENST00000586344 TNIKQ9UKE5 1360 aa20.39■□□□□ 0.86
RANBP3-206ENST00000586344 UBTFP17480 764 aaKnown RBP20.38■□□□□ 0.85
RANBP3-206ENST00000586344 CUX1P39880 1505 aa20.31■□□□□ 0.84
RANBP3-206ENST00000586344 TOP2BQ02880 1626 aa20.3■□□□□ 0.84
RANBP3-206ENST00000586344 PRDM2Q13029 1718 aa20.29■□□□□ 0.84
RANBP3-206ENST00000586344 EEA1Q15075 1411 aa20.27■□□□□ 0.84
RANBP3-206ENST00000586344 DIEXFQ68CQ4 756 aaKnown RBP20.27■□□□□ 0.83
RANBP3-206ENST00000586344 FANCD2Q9BXW9 1451 aa20.27■□□□□ 0.83
RANBP3-206ENST00000586344 NEUROD1Q13562 356 aa20.24■□□□□ 0.83
RANBP3-206ENST00000586344 BIVM-ERCC5R4GMW8 1640 aa20.23■□□□□ 0.83
RANBP3-206ENST00000586344 ACIN1Q9UKV3 1341 aaKnown RBP20.22■□□□□ 0.83
RANBP3-206ENST00000586344 GOLGA3Q08378 1498 aa20.21■□□□□ 0.83
RANBP3-206ENST00000586344 LAMC3Q9Y6N6 1575 aa20.17■□□□□ 0.82
RANBP3-206ENST00000586344 CEP164Q9UPV0 1460 aa20.1■□□□□ 0.81
RANBP3-206ENST00000586344 PELP1Q8IZL8 1130 aaKnown RBP20.1■□□□□ 0.81
RANBP3-206ENST00000586344 HNRNPUL2Q1KMD3 747 aaKnown RBP20.09■□□□□ 0.81
RANBP3-206ENST00000586344 FGD5Q6ZNL6 1462 aa20.09■□□□□ 0.81
RANBP3-206ENST00000586344 PDS5BQ9NTI5 1447 aa20.07■□□□□ 0.8
RANBP3-206ENST00000586344 KIF21AQ7Z4S6 1674 aa20.05■□□□□ 0.8
RANBP3-206ENST00000586344 ZNF316A6NFI3 1004 aaPredicted RBP20.04■□□□□ 0.8
RANBP3-206ENST00000586344 RANGAP1P46060 587 aaPredicted RBP20.04■□□□□ 0.8
RANBP3-206ENST00000586344 CLIP1P30622 1438 aa20.04■□□□□ 0.8
RANBP3-206ENST00000586344 TOPBP1Q92547 1522 aa20.04■□□□□ 0.8
RANBP3-206ENST00000586344 GTF3C3Q9Y5Q9 886 aa20.03■□□□□ 0.8
RANBP3-206ENST00000586344 URB2Q14146 1524 aaKnown RBP20.03■□□□□ 0.8
RANBP3-206ENST00000586344 DNMBPQ6XZF7 1577 aa20.01■□□□□ 0.79
RANBP3-206ENST00000586344 RAD54L2Q9Y4B4 1467 aa20■□□□□ 0.79
RANBP3-206ENST00000586344 CUX2O14529 1486 aa19.99■□□□□ 0.79
RANBP3-206ENST00000586344 CENPBP07199 599 aaPredicted RBP19.99■□□□□ 0.79
RANBP3-206ENST00000586344 RAPGEF2Q9Y4G8 1499 aa19.98■□□□□ 0.79
RANBP3-206ENST00000586344 KIF21BO75037 1637 aa19.98■□□□□ 0.79
RANBP3-206ENST00000586344 KIF27Q86VH2 1401 aa19.98■□□□□ 0.79
RANBP3-206ENST00000586344 POLA1P09884 1462 aaPredicted RBP19.97■□□□□ 0.79
RANBP3-206ENST00000586344 VPS8Q8N3P4 1428 aa19.95■□□□□ 0.78
RANBP3-206ENST00000586344 APLP2Q06481 763 aa19.89■□□□□ 0.77
RANBP3-206ENST00000586344 YTHDC1Q96MU7 727 aaKnown RBP19.88■□□□□ 0.77
RANBP3-206ENST00000586344 MIER1Q8N108 512 aa19.86■□□□□ 0.77
RANBP3-206ENST00000586344 PRXQ9BXM0 1461 aa19.86■□□□□ 0.77
RANBP3-206ENST00000586344 IGF1RP08069 1367 aa19.85■□□□□ 0.77
RANBP3-206ENST00000586344 ERCC6Q03468 1493 aa19.83■□□□□ 0.76
RANBP3-206ENST00000586344 ABCA10Q8WWZ4 1543 aa19.82■□□□□ 0.76
RANBP3-206ENST00000586344 MRC2Q9UBG0 1479 aa19.82■□□□□ 0.76
RANBP3-206ENST00000586344 TDRD9Q8NDG6 1382 aaKnown RBP19.82■□□□□ 0.76
RANBP3-206ENST00000586344 ERICH3Q5RHP9 1530 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms