RNA–Protein interactions for RNA: ENST00000586250.1

TMEM259-203, Transcript of transmembrane protein 259, humanhuman

TSL 3

Gene TMEM259, Length 418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-203ENST00000586250 NISCHQ9Y2I1 1504 aa32.31■■■□□ 2.76
TMEM259-203ENST00000586250 CCDC180Q9P1Z9 1646 aa28.79■■■□□ 2.2
TMEM259-203ENST00000586250 ABCC9O60706 1549 aa28.28■■■□□ 2.12
TMEM259-203ENST00000586250 RB1CC1Q8TDY2 1594 aa27.1■■□□□ 1.93
TMEM259-203ENST00000586250 NACADO15069 1562 aa27.04■■□□□ 1.92
TMEM259-203ENST00000586250 ZCCHC6Q5VYS8 1495 aaKnown RBP26.92■■□□□ 1.9
TMEM259-203ENST00000586250 DCAF8L2P0C7V8 631 aa26.9■■□□□ 1.9
TMEM259-203ENST00000586250 MYO15BQ96JP2 1530 aa26.84■■□□□ 1.89
TMEM259-203ENST00000586250 DCAF1Q9Y4B6 1507 aa26.7■■□□□ 1.86
TMEM259-203ENST00000586250 UNC13AQ9UPW8 1703 aa26.64■■□□□ 1.85
TMEM259-203ENST00000586250 BICRAQ9NZM4 1560 aa26.41■■□□□ 1.82
TMEM259-203ENST00000586250 PABPN1Q86U42 306 aaKnown RBP eCLIP26.37■■□□□ 1.81
TMEM259-203ENST00000586250 SCRIBQ14160 1630 aa26.28■■□□□ 1.8
TMEM259-203ENST00000586250 DNAJC5BQ9UF47 199 aa26.1■■□□□ 1.77
TMEM259-203ENST00000586250 SHROOM4Q9ULL8 1493 aa25.98■■□□□ 1.75
TMEM259-203ENST00000586250 EIF4G1Q04637 1599 aaKnown RBP25.66■■□□□ 1.7
TMEM259-203ENST00000586250 CC2D2AQ9P2K1 1620 aa25.59■■□□□ 1.69
TMEM259-203ENST00000586250 CECR2Q9BXF3 1484 aa25.39■■□□□ 1.65
TMEM259-203ENST00000586250 SMARCA4P51532 1647 aa25.12■■□□□ 1.61
TMEM259-203ENST00000586250 BAZ1AQ9NRL2 1556 aaPredicted RBP25.01■■□□□ 1.59
TMEM259-203ENST00000586250 ATAD2BQ9ULI0 1458 aa24.98■■□□□ 1.59
TMEM259-203ENST00000586250 NCAPD3P42695 1498 aa24.96■■□□□ 1.59
TMEM259-203ENST00000586250 MROH2BQ7Z745 1585 aa24.94■■□□□ 1.58
TMEM259-203ENST00000586250 SMARCA2P51531 1590 aa24.91■■□□□ 1.58
TMEM259-203ENST00000586250 PEG3Q9GZU2 1588 aa24.87■■□□□ 1.57
TMEM259-203ENST00000586250 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
TMEM259-203ENST00000586250 BAZ1BQ9UIG0 1483 aaKnown RBP24.74■■□□□ 1.55
TMEM259-203ENST00000586250 WIZO95785 1651 aa24.68■■□□□ 1.54
TMEM259-203ENST00000586250 RSF1Q96T23 1441 aaPredicted RBP24.57■■□□□ 1.52
TMEM259-203ENST00000586250 NESP48681 1621 aa24.48■■□□□ 1.51
TMEM259-203ENST00000586250 TOP2AP11388 1531 aaKnown RBP24.36■■□□□ 1.49
TMEM259-203ENST00000586250 LAMC3Q9Y6N6 1575 aa24.33■■□□□ 1.48
TMEM259-203ENST00000586250 ERCC6Q03468 1493 aa24.31■■□□□ 1.48
TMEM259-203ENST00000586250 KIF21AQ7Z4S6 1674 aa24.21■■□□□ 1.47
TMEM259-203ENST00000586250 CADPSQ9ULU8 1353 aa24.2■■□□□ 1.46
TMEM259-203ENST00000586250 THOC2Q8NI27 1593 aaKnown RBP24.16■■□□□ 1.46
TMEM259-203ENST00000586250 CUX2O14529 1486 aa24.11■■□□□ 1.45
TMEM259-203ENST00000586250 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
TMEM259-203ENST00000586250 CFTRP13569 1480 aa24.07■■□□□ 1.44
TMEM259-203ENST00000586250 CCDC88BA6NC98 1476 aa24.07■■□□□ 1.44
TMEM259-203ENST00000586250 FANCD2Q9BXW9 1451 aa23.96■■□□□ 1.43
TMEM259-203ENST00000586250 PRDM2Q13029 1718 aa23.95■■□□□ 1.42
TMEM259-203ENST00000586250 MRC2Q9UBG0 1479 aa23.93■■□□□ 1.42
TMEM259-203ENST00000586250 CEP164Q9UPV0 1460 aa23.93■■□□□ 1.42
TMEM259-203ENST00000586250 WDR62O43379 1518 aa23.89■■□□□ 1.42
TMEM259-203ENST00000586250 DNAJC5Q9H3Z4 198 aa23.87■■□□□ 1.41
TMEM259-203ENST00000586250 URB2Q14146 1524 aaKnown RBP23.79■■□□□ 1.4
TMEM259-203ENST00000586250 SUPT5HO00267 1087 aaKnown RBP23.77■■□□□ 1.4
TMEM259-203ENST00000586250 TOPBP1Q92547 1522 aa23.59■■□□□ 1.37
TMEM259-203ENST00000586250 DNMBPQ6XZF7 1577 aa23.55■■□□□ 1.36
TMEM259-203ENST00000586250 ABCC8Q09428 1581 aa23.47■■□□□ 1.35
TMEM259-203ENST00000586250 IFT140Q96RY7 1462 aa23.42■■□□□ 1.34
TMEM259-203ENST00000586250 ZNF608Q9ULD9 1512 aaPredicted RBP23.41■■□□□ 1.34
TMEM259-203ENST00000586250 CUX1P39880 1505 aa23.4■■□□□ 1.34
TMEM259-203ENST00000586250 POLA1P09884 1462 aaPredicted RBP23.39■■□□□ 1.34
TMEM259-203ENST00000586250 TARBP1Q13395 1621 aaKnown RBP23.38■■□□□ 1.33
TMEM259-203ENST00000586250 EIF4G3O43432 1585 aaKnown RBP23.31■■□□□ 1.32
TMEM259-203ENST00000586250 FGD5Q6ZNL6 1462 aa23.3■■□□□ 1.32
TMEM259-203ENST00000586250 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
TMEM259-203ENST00000586250 SOGA1O94964 1423 aa23.22■■□□□ 1.31
TMEM259-203ENST00000586250 AQRO60306 1485 aaKnown RBP eCLIP23.22■■□□□ 1.317e-14■■■■□ 21.4
TMEM259-203ENST00000586250 WDR97A6NE52 1622 aa23.2■■□□□ 1.3
TMEM259-203ENST00000586250 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
TMEM259-203ENST00000586250 BIVM-ERCC5R4GMW8 1640 aa23.16■■□□□ 1.3
TMEM259-203ENST00000586250 TOP2BQ02880 1626 aa23.14■■□□□ 1.29
TMEM259-203ENST00000586250 WRNQ14191 1432 aaPredicted RBP eCLIP23.13■■□□□ 1.293e-7■□□□□ 11.1
TMEM259-203ENST00000586250 TDRD9Q8NDG6 1382 aaKnown RBP23.13■■□□□ 1.29
TMEM259-203ENST00000586250 CHD1O14646 1710 aa23.06■■□□□ 1.28
TMEM259-203ENST00000586250 ABCA10Q8WWZ4 1543 aa23.06■■□□□ 1.28
TMEM259-203ENST00000586250 ABCA5Q8WWZ7 1642 aa23.04■■□□□ 1.28
TMEM259-203ENST00000586250 PBRM1Q86U86 1689 aa23.01■■□□□ 1.27
TMEM259-203ENST00000586250 SNAPC4Q5SXM2 1469 aa23.01■■□□□ 1.27
TMEM259-203ENST00000586250 OSCARQ8IYS5 282 aa23.01■■□□□ 1.27
TMEM259-203ENST00000586250 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
TMEM259-203ENST00000586250 GAPVD1Q14C86 1478 aa22.97■■□□□ 1.27
TMEM259-203ENST00000586250 MAGI1Q96QZ7 1491 aaPredicted RBP22.93■■□□□ 1.26
TMEM259-203ENST00000586250 TRIM41Q8WV44 630 aa22.89■■□□□ 1.25
TMEM259-203ENST00000586250 FBLN2P98095 1184 aa22.85■■□□□ 1.25
TMEM259-203ENST00000586250 SYNJ2O15056 1496 aa22.85■■□□□ 1.25
TMEM259-203ENST00000586250 ADAMTS12P58397 1594 aa22.82■■□□□ 1.24
TMEM259-203ENST00000586250 RIMBP3CA6NJZ7 1639 aa22.82■■□□□ 1.24
TMEM259-203ENST00000586250 RIMBP3BA6NNM3 1639 aa22.82■■□□□ 1.24
TMEM259-203ENST00000586250 RIMBP3Q9UFD9 1639 aa22.82■■□□□ 1.24
TMEM259-203ENST00000586250 CLASP1Q7Z460 1538 aa22.79■■□□□ 1.24
TMEM259-203ENST00000586250 ARHGEF11O15085 1522 aa22.77■■□□□ 1.24
TMEM259-203ENST00000586250 ERICH3Q5RHP9 1530 aa22.77■■□□□ 1.24
TMEM259-203ENST00000586250 CHMP7Q8WUX9 453 aaPredicted RBP22.76■■□□□ 1.23
TMEM259-203ENST00000586250 GRIN2AQ12879 1464 aa22.72■■□□□ 1.23
TMEM259-203ENST00000586250 FHAD1B1AJZ9 1412 aa22.68■■□□□ 1.22
TMEM259-203ENST00000586250 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
TMEM259-203ENST00000586250 NUP160Q12769 1436 aa22.63■■□□□ 1.21
TMEM259-203ENST00000586250 KIF27Q86VH2 1401 aa22.62■■□□□ 1.21
TMEM259-203ENST00000586250 ARAP1Q96P48 1450 aa22.61■■□□□ 1.21
TMEM259-203ENST00000586250 IGF1RP08069 1367 aa22.58■■□□□ 1.21
TMEM259-203ENST00000586250 CUL7Q14999 1698 aa22.55■■□□□ 1.2
TMEM259-203ENST00000586250 ERCC6L2Q5T890 1561 aa22.51■■□□□ 1.19
TMEM259-203ENST00000586250 SHROOM2Q13796 1616 aa22.51■■□□□ 1.19
TMEM259-203ENST00000586250 RUSC2Q8N2Y8 1516 aa22.51■■□□□ 1.19
TMEM259-203ENST00000586250 CYB5RLQ6IPT4 315 aa22.47■■□□□ 1.19
TMEM259-203ENST00000586250 CARMIL1Q5VZK9 1371 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms