RNA–Protein interactions for RNA: ENST00000586164.1

TCF3-207, Transcript of transcription factor 3, humanhuman

TSL 3

Gene TCF3, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-207ENST00000586164 NISCHQ9Y2I1 1504 aa44.27■■■■■ 4.68
TCF3-207ENST00000586164 CCDC180Q9P1Z9 1646 aa39.36■■■■□ 3.89
TCF3-207ENST00000586164 ABCC9O60706 1549 aa38.71■■■■□ 3.79
TCF3-207ENST00000586164 DCAF8L2P0C7V8 631 aa37.14■■■■□ 3.54
TCF3-207ENST00000586164 RB1CC1Q8TDY2 1594 aa37.12■■■■□ 3.53
TCF3-207ENST00000586164 NACADO15069 1562 aa37.04■■■■□ 3.52
TCF3-207ENST00000586164 ZCCHC6Q5VYS8 1495 aaKnown RBP36.84■■■■□ 3.49
TCF3-207ENST00000586164 MYO15BQ96JP2 1530 aa36.73■■■■□ 3.47
TCF3-207ENST00000586164 DCAF1Q9Y4B6 1507 aa36.56■■■■□ 3.44
TCF3-207ENST00000586164 UNC13AQ9UPW8 1703 aa36.37■■■■□ 3.41
TCF3-207ENST00000586164 PABPN1Q86U42 306 aaKnown RBP eCLIP36.2■■■■□ 3.393e-7■□□□□ 8.9
TCF3-207ENST00000586164 BICRAQ9NZM4 1560 aa36.05■■■■□ 3.36
TCF3-207ENST00000586164 SCRIBQ14160 1630 aa36■■■■□ 3.35
TCF3-207ENST00000586164 DNAJC5BQ9UF47 199 aa35.67■■■■□ 3.3
TCF3-207ENST00000586164 SHROOM4Q9ULL8 1493 aa35.52■■■■□ 3.28
TCF3-207ENST00000586164 EIF4G1Q04637 1599 aaKnown RBP35.08■■■■□ 3.21
TCF3-207ENST00000586164 CC2D2AQ9P2K1 1620 aa34.99■■■■□ 3.19
TCF3-207ENST00000586164 CECR2Q9BXF3 1484 aa34.76■■■■□ 3.15
TCF3-207ENST00000586164 SMARCA4P51532 1647 aa34.38■■■■□ 3.09
TCF3-207ENST00000586164 BAZ1AQ9NRL2 1556 aaPredicted RBP34.3■■■■□ 3.08
TCF3-207ENST00000586164 ATAD2BQ9ULI0 1458 aa34.21■■■■□ 3.07
TCF3-207ENST00000586164 NCAPD3P42695 1498 aa34.19■■■■□ 3.06
TCF3-207ENST00000586164 MROH2BQ7Z745 1585 aa34.16■■■■□ 3.06
TCF3-207ENST00000586164 SMARCA2P51531 1590 aa34.14■■■■□ 3.06
TCF3-207ENST00000586164 PEG3Q9GZU2 1588 aa34■■■■□ 3.03
TCF3-207ENST00000586164 HMGXB3Q12766 1538 aa33.99■■■■□ 3.03
TCF3-207ENST00000586164 BAZ1BQ9UIG0 1483 aaKnown RBP33.93■■■■□ 3.02
TCF3-207ENST00000586164 WIZO95785 1651 aa33.81■■■■□ 3
TCF3-207ENST00000586164 RSF1Q96T23 1441 aaPredicted RBP33.71■■■□□ 2.99
TCF3-207ENST00000586164 NESP48681 1621 aa33.49■■■□□ 2.95
TCF3-207ENST00000586164 TOP2AP11388 1531 aaKnown RBP33.38■■■□□ 2.93
TCF3-207ENST00000586164 ERCC6Q03468 1493 aa33.33■■■□□ 2.93
TCF3-207ENST00000586164 LAMC3Q9Y6N6 1575 aa33.3■■■□□ 2.92
TCF3-207ENST00000586164 CADPSQ9ULU8 1353 aa33.21■■■□□ 2.91
TCF3-207ENST00000586164 PDS5BQ9NTI5 1447 aa33.08■■■□□ 2.89
TCF3-207ENST00000586164 KIF21AQ7Z4S6 1674 aa33.07■■■□□ 2.89
TCF3-207ENST00000586164 CCDC88BA6NC98 1476 aa33.03■■■□□ 2.88
TCF3-207ENST00000586164 CFTRP13569 1480 aa32.98■■■□□ 2.87
TCF3-207ENST00000586164 CUX2O14529 1486 aa32.96■■■□□ 2.87
TCF3-207ENST00000586164 THOC2Q8NI27 1593 aaKnown RBP32.94■■■□□ 2.86
TCF3-207ENST00000586164 SUPT5HO00267 1087 aaKnown RBP32.87■■■□□ 2.85
TCF3-207ENST00000586164 FANCD2Q9BXW9 1451 aa32.84■■■□□ 2.85
TCF3-207ENST00000586164 CEP164Q9UPV0 1460 aa32.79■■■□□ 2.84
TCF3-207ENST00000586164 MRC2Q9UBG0 1479 aa32.76■■■□□ 2.84
TCF3-207ENST00000586164 PRDM2Q13029 1718 aa32.74■■■□□ 2.83
TCF3-207ENST00000586164 WDR62O43379 1518 aa32.65■■■□□ 2.82
TCF3-207ENST00000586164 URB2Q14146 1524 aaKnown RBP32.53■■■□□ 2.8
TCF3-207ENST00000586164 TOPBP1Q92547 1522 aa32.31■■■□□ 2.76
TCF3-207ENST00000586164 ABCC8Q09428 1581 aa32.24■■■□□ 2.75
TCF3-207ENST00000586164 DNMBPQ6XZF7 1577 aa32.24■■■□□ 2.75
TCF3-207ENST00000586164 DNAJC5Q9H3Z4 198 aa32.13■■■□□ 2.73
TCF3-207ENST00000586164 IFT140Q96RY7 1462 aa32.1■■■□□ 2.73
TCF3-207ENST00000586164 CUX1P39880 1505 aa32.05■■■□□ 2.72
TCF3-207ENST00000586164 ZNF608Q9ULD9 1512 aaPredicted RBP32.03■■■□□ 2.72
TCF3-207ENST00000586164 POLA1P09884 1462 aaPredicted RBP32.02■■■□□ 2.72
TCF3-207ENST00000586164 TARBP1Q13395 1621 aaKnown RBP31.97■■■□□ 2.71
TCF3-207ENST00000586164 FGD5Q6ZNL6 1462 aa31.94■■■□□ 2.7
TCF3-207ENST00000586164 RAD54L2Q9Y4B4 1467 aa31.93■■■□□ 2.7
TCF3-207ENST00000586164 SOGA1O94964 1423 aa31.9■■■□□ 2.7
TCF3-207ENST00000586164 EIF4G3O43432 1585 aaKnown RBP31.86■■■□□ 2.69
TCF3-207ENST00000586164 AQRO60306 1485 aaKnown RBP eCLIP31.84■■■□□ 2.693e-8■■■■□ 23.3
TCF3-207ENST00000586164 WRNQ14191 1432 aaPredicted RBP eCLIP31.77■■■□□ 2.68
TCF3-207ENST00000586164 TDRD9Q8NDG6 1382 aaKnown RBP31.76■■■□□ 2.67
TCF3-207ENST00000586164 SYNJ1O43426 1573 aa31.74■■■□□ 2.67
TCF3-207ENST00000586164 TOP2BQ02880 1626 aa31.71■■■□□ 2.67
TCF3-207ENST00000586164 BIVM-ERCC5R4GMW8 1640 aa31.71■■■□□ 2.67
TCF3-207ENST00000586164 WDR97A6NE52 1622 aa31.67■■■□□ 2.66
TCF3-207ENST00000586164 OSCARQ8IYS5 282 aa31.64■■■□□ 2.66
TCF3-207ENST00000586164 ABCA10Q8WWZ4 1543 aa31.59■■■□□ 2.65
TCF3-207ENST00000586164 CHD1O14646 1710 aa31.52■■■□□ 2.64
TCF3-207ENST00000586164 GAPVD1Q14C86 1478 aa31.52■■■□□ 2.64
TCF3-207ENST00000586164 GRIN2BQ13224 1484 aa31.51■■■□□ 2.63
TCF3-207ENST00000586164 SNAPC4Q5SXM2 1469 aa31.51■■■□□ 2.63
TCF3-207ENST00000586164 ABCA5Q8WWZ7 1642 aa31.49■■■□□ 2.63
TCF3-207ENST00000586164 FBLN2P98095 1184 aa31.49■■■□□ 2.63
TCF3-207ENST00000586164 PBRM1Q86U86 1689 aa31.48■■■□□ 2.63
TCF3-207ENST00000586164 MAGI1Q96QZ7 1491 aaPredicted RBP31.41■■■□□ 2.62
TCF3-207ENST00000586164 CHMP7Q8WUX9 453 aaPredicted RBP31.35■■■□□ 2.61
TCF3-207ENST00000586164 SYNJ2O15056 1496 aa31.31■■■□□ 2.6
TCF3-207ENST00000586164 ERICH3Q5RHP9 1530 aa31.2■■■□□ 2.59
TCF3-207ENST00000586164 ADAMTS12P58397 1594 aa31.2■■■□□ 2.58
TCF3-207ENST00000586164 RIMBP3CA6NJZ7 1639 aa31.16■■■□□ 2.58
TCF3-207ENST00000586164 RIMBP3BA6NNM3 1639 aa31.16■■■□□ 2.58
TCF3-207ENST00000586164 RIMBP3Q9UFD9 1639 aa31.16■■■□□ 2.58
TCF3-207ENST00000586164 FHAD1B1AJZ9 1412 aa31.13■■■□□ 2.57
TCF3-207ENST00000586164 ARHGEF11O15085 1522 aa31.12■■■□□ 2.57
TCF3-207ENST00000586164 CLASP1Q7Z460 1538 aa31.12■■■□□ 2.57
TCF3-207ENST00000586164 GRIN2AQ12879 1464 aa31.11■■■□□ 2.57
TCF3-207ENST00000586164 KIF27Q86VH2 1401 aa31.1■■■□□ 2.57
TCF3-207ENST00000586164 TRIM41Q8WV44 630 aa31.1■■■□□ 2.57
TCF3-207ENST00000586164 IGF1RP08069 1367 aa31.03■■■□□ 2.56
TCF3-207ENST00000586164 CEP170Q5SW79 1584 aa30.99■■■□□ 2.55
TCF3-207ENST00000586164 NUP160Q12769 1436 aa30.97■■■□□ 2.55
TCF3-207ENST00000586164 CUL7Q14999 1698 aa30.9■■■□□ 2.54
TCF3-207ENST00000586164 RUSC2Q8N2Y8 1516 aa30.89■■■□□ 2.54
TCF3-207ENST00000586164 CYB5RLQ6IPT4 315 aa30.89■■■□□ 2.54
TCF3-207ENST00000586164 ARAP1Q96P48 1450 aa30.87■■■□□ 2.53
TCF3-207ENST00000586164 CARMIL1Q5VZK9 1371 aa30.83■■■□□ 2.53
TCF3-207ENST00000586164 SHROOM2Q13796 1616 aa30.76■■■□□ 2.51
TCF3-207ENST00000586164 ERCC6L2Q5T890 1561 aa30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms