RNA–Protein interactions for RNA: ENST00000586093.1

SMAD7-204, Transcript of SMAD family member 7, humanhuman

TSL 2

Gene SMAD7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-204ENST00000586093 NISCHQ9Y2I1 1504 aa31.61■■■□□ 2.65
SMAD7-204ENST00000586093 CCDC180Q9P1Z9 1646 aa28.06■■■□□ 2.08
SMAD7-204ENST00000586093 ABCC9O60706 1549 aa27.56■■■□□ 2
SMAD7-204ENST00000586093 RB1CC1Q8TDY2 1594 aa26.48■■□□□ 1.83
SMAD7-204ENST00000586093 NACADO15069 1562 aa26.47■■□□□ 1.83
SMAD7-204ENST00000586093 DCAF8L2P0C7V8 631 aa26.41■■□□□ 1.82
SMAD7-204ENST00000586093 MYO15BQ96JP2 1530 aa26.36■■□□□ 1.81
SMAD7-204ENST00000586093 ZCCHC6Q5VYS8 1495 aaKnown RBP26.29■■□□□ 1.8
SMAD7-204ENST00000586093 DCAF1Q9Y4B6 1507 aa26.19■■□□□ 1.78
SMAD7-204ENST00000586093 UNC13AQ9UPW8 1703 aa25.82■■□□□ 1.72
SMAD7-204ENST00000586093 PABPN1Q86U42 306 aaKnown RBP eCLIP25.8■■□□□ 1.72
SMAD7-204ENST00000586093 BICRAQ9NZM4 1560 aa25.73■■□□□ 1.71
SMAD7-204ENST00000586093 SCRIBQ14160 1630 aa25.55■■□□□ 1.68
SMAD7-204ENST00000586093 DNAJC5BQ9UF47 199 aa25.53■■□□□ 1.68
SMAD7-204ENST00000586093 SHROOM4Q9ULL8 1493 aa25.46■■□□□ 1.67
SMAD7-204ENST00000586093 EIF4G1Q04637 1599 aaKnown RBP25.01■■□□□ 1.59
SMAD7-204ENST00000586093 CC2D2AQ9P2K1 1620 aa24.92■■□□□ 1.58
SMAD7-204ENST00000586093 CECR2Q9BXF3 1484 aa24.8■■□□□ 1.56
SMAD7-204ENST00000586093 NCAPD3P42695 1498 aa24.5■■□□□ 1.51
SMAD7-204ENST00000586093 SMARCA4P51532 1647 aa24.49■■□□□ 1.51
SMAD7-204ENST00000586093 BAZ1AQ9NRL2 1556 aaPredicted RBP24.46■■□□□ 1.51
SMAD7-204ENST00000586093 ATAD2BQ9ULI0 1458 aa24.45■■□□□ 1.51
SMAD7-204ENST00000586093 SMARCA2P51531 1590 aa24.36■■□□□ 1.49
SMAD7-204ENST00000586093 MROH2BQ7Z745 1585 aa24.34■■□□□ 1.49
SMAD7-204ENST00000586093 PEG3Q9GZU2 1588 aa24.32■■□□□ 1.48
SMAD7-204ENST00000586093 HMGXB3Q12766 1538 aa24.28■■□□□ 1.48
SMAD7-204ENST00000586093 BAZ1BQ9UIG0 1483 aaKnown RBP24.18■■□□□ 1.46
SMAD7-204ENST00000586093 RSF1Q96T23 1441 aaPredicted RBP24.08■■□□□ 1.44
SMAD7-204ENST00000586093 WIZO95785 1651 aa24.02■■□□□ 1.44
SMAD7-204ENST00000586093 NESP48681 1621 aa23.84■■□□□ 1.41
SMAD7-204ENST00000586093 TOP2AP11388 1531 aaKnown RBP23.78■■□□□ 1.4
SMAD7-204ENST00000586093 LAMC3Q9Y6N6 1575 aa23.77■■□□□ 1.4
SMAD7-204ENST00000586093 CADPSQ9ULU8 1353 aa23.77■■□□□ 1.4
SMAD7-204ENST00000586093 ERCC6Q03468 1493 aa23.72■■□□□ 1.39
SMAD7-204ENST00000586093 PDS5BQ9NTI5 1447 aa23.65■■□□□ 1.38
SMAD7-204ENST00000586093 CFTRP13569 1480 aa23.59■■□□□ 1.37
SMAD7-204ENST00000586093 CUX2O14529 1486 aa23.58■■□□□ 1.37
SMAD7-204ENST00000586093 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
SMAD7-204ENST00000586093 KIF21AQ7Z4S6 1674 aa23.48■■□□□ 1.35
SMAD7-204ENST00000586093 THOC2Q8NI27 1593 aaKnown RBP23.46■■□□□ 1.35
SMAD7-204ENST00000586093 FANCD2Q9BXW9 1451 aa23.42■■□□□ 1.34
SMAD7-204ENST00000586093 MRC2Q9UBG0 1479 aa23.36■■□□□ 1.33
SMAD7-204ENST00000586093 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
SMAD7-204ENST00000586093 SUPT5HO00267 1087 aaKnown RBP23.32■■□□□ 1.32
SMAD7-204ENST00000586093 WDR62O43379 1518 aa23.3■■□□□ 1.32
SMAD7-204ENST00000586093 PRDM2Q13029 1718 aa23.24■■□□□ 1.31
SMAD7-204ENST00000586093 URB2Q14146 1524 aaKnown RBP23.2■■□□□ 1.3
SMAD7-204ENST00000586093 DNAJC5Q9H3Z4 198 aa23.08■■□□□ 1.29
SMAD7-204ENST00000586093 ABCC8Q09428 1581 aa23.07■■□□□ 1.28
SMAD7-204ENST00000586093 TOPBP1Q92547 1522 aa23.03■■□□□ 1.28
SMAD7-204ENST00000586093 DNMBPQ6XZF7 1577 aa22.97■■□□□ 1.27
SMAD7-204ENST00000586093 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
SMAD7-204ENST00000586093 POLA1P09884 1462 aaPredicted RBP22.84■■□□□ 1.25
SMAD7-204ENST00000586093 CUX1P39880 1505 aa22.82■■□□□ 1.24
SMAD7-204ENST00000586093 ZNF608Q9ULD9 1512 aaPredicted RBP22.82■■□□□ 1.24
SMAD7-204ENST00000586093 TARBP1Q13395 1621 aaKnown RBP22.79■■□□□ 1.24
SMAD7-204ENST00000586093 SOGA1O94964 1423 aa22.78■■□□□ 1.24
SMAD7-204ENST00000586093 FGD5Q6ZNL6 1462 aa22.74■■□□□ 1.23
SMAD7-204ENST00000586093 RAD54L2Q9Y4B4 1467 aa22.74■■□□□ 1.23
SMAD7-204ENST00000586093 AQRO60306 1485 aaKnown RBP eCLIP22.7■■□□□ 1.22
SMAD7-204ENST00000586093 OSCARQ8IYS5 282 aa22.66■■□□□ 1.22
SMAD7-204ENST00000586093 TDRD9Q8NDG6 1382 aaKnown RBP22.65■■□□□ 1.22
SMAD7-204ENST00000586093 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
SMAD7-204ENST00000586093 EIF4G3O43432 1585 aaKnown RBP22.64■■□□□ 1.22
SMAD7-204ENST00000586093 WDR97A6NE52 1622 aa22.6■■□□□ 1.21
SMAD7-204ENST00000586093 TOP2BQ02880 1626 aa22.6■■□□□ 1.21
SMAD7-204ENST00000586093 ABCA10Q8WWZ4 1543 aa22.57■■□□□ 1.2
SMAD7-204ENST00000586093 BIVM-ERCC5R4GMW8 1640 aa22.57■■□□□ 1.2
SMAD7-204ENST00000586093 SYNJ1O43426 1573 aa22.56■■□□□ 1.2
SMAD7-204ENST00000586093 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
SMAD7-204ENST00000586093 GAPVD1Q14C86 1478 aa22.48■■□□□ 1.19
SMAD7-204ENST00000586093 MAGI1Q96QZ7 1491 aaPredicted RBP22.44■■□□□ 1.18
SMAD7-204ENST00000586093 SNAPC4Q5SXM2 1469 aa22.43■■□□□ 1.18
SMAD7-204ENST00000586093 ABCA5Q8WWZ7 1642 aa22.42■■□□□ 1.18
SMAD7-204ENST00000586093 FBLN2P98095 1184 aa22.4■■□□□ 1.18
SMAD7-204ENST00000586093 CHMP7Q8WUX9 453 aaPredicted RBP22.38■■□□□ 1.17
SMAD7-204ENST00000586093 SYNJ2O15056 1496 aa22.35■■□□□ 1.17
SMAD7-204ENST00000586093 CHD1O14646 1710 aa22.35■■□□□ 1.17
SMAD7-204ENST00000586093 PBRM1Q86U86 1689 aa22.33■■□□□ 1.16
SMAD7-204ENST00000586093 ERICH3Q5RHP9 1530 aa22.28■■□□□ 1.16
SMAD7-204ENST00000586093 FHAD1B1AJZ9 1412 aa22.24■■□□□ 1.15
SMAD7-204ENST00000586093 IGF1RP08069 1367 aa22.21■■□□□ 1.15
SMAD7-204ENST00000586093 CLASP1Q7Z460 1538 aa22.21■■□□□ 1.15
SMAD7-204ENST00000586093 KIF27Q86VH2 1401 aa22.2■■□□□ 1.14
SMAD7-204ENST00000586093 GRIN2AQ12879 1464 aa22.19■■□□□ 1.14
SMAD7-204ENST00000586093 ARHGEF11O15085 1522 aa22.19■■□□□ 1.14
SMAD7-204ENST00000586093 ADAMTS12P58397 1594 aa22.19■■□□□ 1.14
SMAD7-204ENST00000586093 RIMBP3CA6NJZ7 1639 aa22.18■■□□□ 1.14
SMAD7-204ENST00000586093 RIMBP3BA6NNM3 1639 aa22.18■■□□□ 1.14
SMAD7-204ENST00000586093 RIMBP3Q9UFD9 1639 aa22.18■■□□□ 1.14
SMAD7-204ENST00000586093 NUP160Q12769 1436 aa22.14■■□□□ 1.14
SMAD7-204ENST00000586093 TRIM41Q8WV44 630 aa22.12■■□□□ 1.13
SMAD7-204ENST00000586093 CEP170Q5SW79 1584 aa22.05■■□□□ 1.12
SMAD7-204ENST00000586093 CYB5RLQ6IPT4 315 aa22.05■■□□□ 1.12
SMAD7-204ENST00000586093 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
SMAD7-204ENST00000586093 CARMIL1Q5VZK9 1371 aa22.02■■□□□ 1.12
SMAD7-204ENST00000586093 CUL7Q14999 1698 aa21.99■■□□□ 1.11
SMAD7-204ENST00000586093 RUSC2Q8N2Y8 1516 aa21.97■■□□□ 1.11
SMAD7-204ENST00000586093 JPH4Q96JJ6 628 aa21.96■■□□□ 1.11
SMAD7-204ENST00000586093 SHROOM2Q13796 1616 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms