RNA–Protein interactions for RNA: ENST00000585986.1

SMAD7-203, Transcript of SMAD family member 7, humanhuman

TSL 4

Gene SMAD7, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-203ENST00000585986 NISCHQ9Y2I1 1504 aa34.93■■■■□ 3.18
SMAD7-203ENST00000585986 ABCC9O60706 1549 aa31.56■■■□□ 2.64
SMAD7-203ENST00000585986 CCDC180Q9P1Z9 1646 aa31.42■■■□□ 2.62
SMAD7-203ENST00000585986 RB1CC1Q8TDY2 1594 aa30.02■■■□□ 2.4
SMAD7-203ENST00000585986 NACADO15069 1562 aa29.78■■■□□ 2.36
SMAD7-203ENST00000585986 DNAJC5BQ9UF47 199 aa29.7■■■□□ 2.35
SMAD7-203ENST00000585986 DCAF8L2P0C7V8 631 aa29.55■■■□□ 2.32
SMAD7-203ENST00000585986 PABPN1Q86U42 306 aaKnown RBP eCLIP29.36■■■□□ 2.29
SMAD7-203ENST00000585986 MYO15BQ96JP2 1530 aa29.35■■■□□ 2.29
SMAD7-203ENST00000585986 UNC13AQ9UPW8 1703 aa29.17■■■□□ 2.26
SMAD7-203ENST00000585986 BICRAQ9NZM4 1560 aa29.07■■■□□ 2.24
SMAD7-203ENST00000585986 ZCCHC6Q5VYS8 1495 aaKnown RBP28.92■■■□□ 2.22
SMAD7-203ENST00000585986 DCAF1Q9Y4B6 1507 aa28.89■■■□□ 2.22
SMAD7-203ENST00000585986 SHROOM4Q9ULL8 1493 aa28.82■■■□□ 2.2
SMAD7-203ENST00000585986 SCRIBQ14160 1630 aa28.58■■■□□ 2.17
SMAD7-203ENST00000585986 CECR2Q9BXF3 1484 aa28.49■■■□□ 2.15
SMAD7-203ENST00000585986 CC2D2AQ9P2K1 1620 aa28.48■■■□□ 2.15
SMAD7-203ENST00000585986 EIF4G1Q04637 1599 aaKnown RBP28.41■■■□□ 2.14
SMAD7-203ENST00000585986 NCAPD3P42695 1498 aa27.5■■□□□ 1.99
SMAD7-203ENST00000585986 DNAJC5Q9H3Z4 198 aa27.49■■□□□ 1.99
SMAD7-203ENST00000585986 ATAD2BQ9ULI0 1458 aa27.36■■□□□ 1.97
SMAD7-203ENST00000585986 CUX2O14529 1486 aa27.35■■□□□ 1.97
SMAD7-203ENST00000585986 ERCC6Q03468 1493 aa27.33■■□□□ 1.97
SMAD7-203ENST00000585986 SMARCA2P51531 1590 aa27.31■■□□□ 1.96
SMAD7-203ENST00000585986 HMGXB3Q12766 1538 aa27.26■■□□□ 1.96
SMAD7-203ENST00000585986 SMARCA4P51532 1647 aa27.26■■□□□ 1.95
SMAD7-203ENST00000585986 BAZ1AQ9NRL2 1556 aaPredicted RBP27.15■■□□□ 1.94
SMAD7-203ENST00000585986 BAZ1BQ9UIG0 1483 aaKnown RBP27.11■■□□□ 1.93
SMAD7-203ENST00000585986 NESP48681 1621 aa27.03■■□□□ 1.92
SMAD7-203ENST00000585986 PEG3Q9GZU2 1588 aa27.03■■□□□ 1.92
SMAD7-203ENST00000585986 LAMC3Q9Y6N6 1575 aa26.89■■□□□ 1.9
SMAD7-203ENST00000585986 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
SMAD7-203ENST00000585986 THOC2Q8NI27 1593 aaKnown RBP26.8■■□□□ 1.88
SMAD7-203ENST00000585986 PDS5BQ9NTI5 1447 aa26.8■■□□□ 1.88
SMAD7-203ENST00000585986 CADPSQ9ULU8 1353 aa26.65■■□□□ 1.86
SMAD7-203ENST00000585986 KIF21AQ7Z4S6 1674 aa26.64■■□□□ 1.86
SMAD7-203ENST00000585986 MRC2Q9UBG0 1479 aa26.54■■□□□ 1.84
SMAD7-203ENST00000585986 WIZO95785 1651 aa26.5■■□□□ 1.83
SMAD7-203ENST00000585986 WDR62O43379 1518 aa26.45■■□□□ 1.83
SMAD7-203ENST00000585986 CEP164Q9UPV0 1460 aa26.4■■□□□ 1.82
SMAD7-203ENST00000585986 FANCD2Q9BXW9 1451 aa26.34■■□□□ 1.81
SMAD7-203ENST00000585986 CFTRP13569 1480 aa26.3■■□□□ 1.8
SMAD7-203ENST00000585986 RSF1Q96T23 1441 aaPredicted RBP26.3■■□□□ 1.8
SMAD7-203ENST00000585986 TOP2AP11388 1531 aaKnown RBP26.24■■□□□ 1.79
SMAD7-203ENST00000585986 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
SMAD7-203ENST00000585986 URB2Q14146 1524 aaKnown RBP26.09■■□□□ 1.77
SMAD7-203ENST00000585986 OSCARQ8IYS5 282 aa26.07■■□□□ 1.76
SMAD7-203ENST00000585986 PRDM2Q13029 1718 aa25.93■■□□□ 1.74
SMAD7-203ENST00000585986 CCDC88BA6NC98 1476 aa25.92■■□□□ 1.74
SMAD7-203ENST00000585986 IFT140Q96RY7 1462 aa25.9■■□□□ 1.74
SMAD7-203ENST00000585986 ABCC8Q09428 1581 aa25.82■■□□□ 1.72
SMAD7-203ENST00000585986 TOPBP1Q92547 1522 aa25.8■■□□□ 1.72
SMAD7-203ENST00000585986 ZNF608Q9ULD9 1512 aaPredicted RBP25.79■■□□□ 1.72
SMAD7-203ENST00000585986 DNMBPQ6XZF7 1577 aa25.7■■□□□ 1.71
SMAD7-203ENST00000585986 RIMBP3CA6NJZ7 1639 aa25.66■■□□□ 1.7
SMAD7-203ENST00000585986 RIMBP3BA6NNM3 1639 aa25.66■■□□□ 1.7
SMAD7-203ENST00000585986 RIMBP3Q9UFD9 1639 aa25.66■■□□□ 1.7
SMAD7-203ENST00000585986 EIF4G3O43432 1585 aaKnown RBP25.65■■□□□ 1.7
SMAD7-203ENST00000585986 ARHGEF11O15085 1522 aa25.6■■□□□ 1.69
SMAD7-203ENST00000585986 TARBP1Q13395 1621 aaKnown RBP25.55■■□□□ 1.68
SMAD7-203ENST00000585986 AQRO60306 1485 aaKnown RBP eCLIP25.54■■□□□ 1.68
SMAD7-203ENST00000585986 POLA1P09884 1462 aaPredicted RBP25.53■■□□□ 1.68
SMAD7-203ENST00000585986 FBLN2P98095 1184 aa25.46■■□□□ 1.67
SMAD7-203ENST00000585986 CYB5RLQ6IPT4 315 aa25.44■■□□□ 1.66
SMAD7-203ENST00000585986 SOGA1O94964 1423 aa25.44■■□□□ 1.66
SMAD7-203ENST00000585986 CHD1O14646 1710 aa25.43■■□□□ 1.66
SMAD7-203ENST00000585986 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
SMAD7-203ENST00000585986 TDRD9Q8NDG6 1382 aaKnown RBP25.38■■□□□ 1.65
SMAD7-203ENST00000585986 WDR97A6NE52 1622 aa25.37■■□□□ 1.65
SMAD7-203ENST00000585986 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
SMAD7-203ENST00000585986 ARAP1Q96P48 1450 aa25.33■■□□□ 1.65
SMAD7-203ENST00000585986 SNAPC4Q5SXM2 1469 aa25.31■■□□□ 1.64
SMAD7-203ENST00000585986 MAGI1Q96QZ7 1491 aaPredicted RBP25.28■■□□□ 1.64
SMAD7-203ENST00000585986 CUX1P39880 1505 aa25.27■■□□□ 1.64
SMAD7-203ENST00000585986 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
SMAD7-203ENST00000585986 GRIN2BQ13224 1484 aa25.26■■□□□ 1.63
SMAD7-203ENST00000585986 TRHP20396 242 aaPredicted RBP25.23■■□□□ 1.63
SMAD7-203ENST00000585986 SYNJ1O43426 1573 aa25.22■■□□□ 1.63
SMAD7-203ENST00000585986 CLASP1Q7Z460 1538 aa25.21■■□□□ 1.63
SMAD7-203ENST00000585986 SYNJ2O15056 1496 aa25.19■■□□□ 1.62
SMAD7-203ENST00000585986 GAPVD1Q14C86 1478 aa25.12■■□□□ 1.61
SMAD7-203ENST00000585986 ABCA10Q8WWZ4 1543 aa25.07■■□□□ 1.6
SMAD7-203ENST00000585986 PBRM1Q86U86 1689 aa25.04■■□□□ 1.6
SMAD7-203ENST00000585986 ABCA5Q8WWZ7 1642 aa25.01■■□□□ 1.59
SMAD7-203ENST00000585986 SUPT5HO00267 1087 aaKnown RBP25■■□□□ 1.59
SMAD7-203ENST00000585986 WRNQ14191 1432 aaPredicted RBP eCLIP24.98■■□□□ 1.59
SMAD7-203ENST00000585986 GRIN2AQ12879 1464 aa24.9■■□□□ 1.58
SMAD7-203ENST00000585986 ADAMTS12P58397 1594 aa24.84■■□□□ 1.57
SMAD7-203ENST00000585986 TOP2BQ02880 1626 aa24.84■■□□□ 1.57
SMAD7-203ENST00000585986 NUP160Q12769 1436 aa24.83■■□□□ 1.57
SMAD7-203ENST00000585986 FHAD1B1AJZ9 1412 aa24.82■■□□□ 1.56
SMAD7-203ENST00000585986 BIVM-ERCC5R4GMW8 1640 aa24.82■■□□□ 1.56
SMAD7-203ENST00000585986 CEP170Q5SW79 1584 aa24.78■■□□□ 1.56
SMAD7-203ENST00000585986 ERICH3Q5RHP9 1530 aa24.76■■□□□ 1.55
SMAD7-203ENST00000585986 ERCC6L2Q5T890 1561 aa24.74■■□□□ 1.55
SMAD7-203ENST00000585986 SHROOM2Q13796 1616 aa24.7■■□□□ 1.54
SMAD7-203ENST00000585986 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
SMAD7-203ENST00000585986 PRG4Q92954 1404 aaPredicted RBP24.61■■□□□ 1.53
SMAD7-203ENST00000585986 JPH4Q96JJ6 628 aa24.58■■□□□ 1.53
SMAD7-203ENST00000585986 RUSC2Q8N2Y8 1516 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms