RNA–Protein interactions for RNA: ENST00000585887.3

LSM14A-204, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 445 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-204ENST00000585887 NISCHQ9Y2I1 1504 aa41.02■■■■■ 4.16
LSM14A-204ENST00000585887 CCDC180Q9P1Z9 1646 aa36.69■■■■□ 3.46
LSM14A-204ENST00000585887 ABCC9O60706 1549 aa36.17■■■■□ 3.38
LSM14A-204ENST00000585887 RB1CC1Q8TDY2 1594 aa34.64■■■■□ 3.14
LSM14A-204ENST00000585887 NACADO15069 1562 aa34.5■■■■□ 3.11
LSM14A-204ENST00000585887 DCAF8L2P0C7V8 631 aa34.35■■■■□ 3.09
LSM14A-204ENST00000585887 MYO15BQ96JP2 1530 aa34.13■■■■□ 3.05
LSM14A-204ENST00000585887 ZCCHC6Q5VYS8 1495 aaKnown RBP34.12■■■■□ 3.05
LSM14A-204ENST00000585887 UNC13AQ9UPW8 1703 aa34■■■■□ 3.03
LSM14A-204ENST00000585887 DCAF1Q9Y4B6 1507 aa33.89■■■■□ 3.02
LSM14A-204ENST00000585887 PABPN1Q86U42 306 aaKnown RBP eCLIP33.69■■■□□ 2.98
LSM14A-204ENST00000585887 BICRAQ9NZM4 1560 aa33.63■■■□□ 2.97
LSM14A-204ENST00000585887 SCRIBQ14160 1630 aa33.47■■■□□ 2.95
LSM14A-204ENST00000585887 DNAJC5BQ9UF47 199 aa33.41■■■□□ 2.94
LSM14A-204ENST00000585887 SHROOM4Q9ULL8 1493 aa33.16■■■□□ 2.9
LSM14A-204ENST00000585887 EIF4G1Q04637 1599 aaKnown RBP32.75■■■□□ 2.83
LSM14A-204ENST00000585887 CC2D2AQ9P2K1 1620 aa32.73■■■□□ 2.83
LSM14A-204ENST00000585887 CECR2Q9BXF3 1484 aa32.5■■■□□ 2.79
LSM14A-204ENST00000585887 SMARCA4P51532 1647 aa31.96■■■□□ 2.71
LSM14A-204ENST00000585887 BAZ1AQ9NRL2 1556 aaPredicted RBP31.82■■■□□ 2.68
LSM14A-204ENST00000585887 ATAD2BQ9ULI0 1458 aa31.79■■■□□ 2.68
LSM14A-204ENST00000585887 NCAPD3P42695 1498 aa31.78■■■□□ 2.68
LSM14A-204ENST00000585887 SMARCA2P51531 1590 aa31.76■■■□□ 2.67
LSM14A-204ENST00000585887 HMGXB3Q12766 1538 aa31.66■■■□□ 2.66
LSM14A-204ENST00000585887 MROH2BQ7Z745 1585 aa31.64■■■□□ 2.65
LSM14A-204ENST00000585887 PEG3Q9GZU2 1588 aa31.6■■■□□ 2.65
LSM14A-204ENST00000585887 BAZ1BQ9UIG0 1483 aaKnown RBP31.53■■■□□ 2.64
LSM14A-204ENST00000585887 WIZO95785 1651 aa31.33■■■□□ 2.61
LSM14A-204ENST00000585887 NESP48681 1621 aa31.21■■■□□ 2.59
LSM14A-204ENST00000585887 ERCC6Q03468 1493 aa31.19■■■□□ 2.58
LSM14A-204ENST00000585887 RSF1Q96T23 1441 aaPredicted RBP31.1■■■□□ 2.57
LSM14A-204ENST00000585887 LAMC3Q9Y6N6 1575 aa31.06■■■□□ 2.56
LSM14A-204ENST00000585887 CUX2O14529 1486 aa30.94■■■□□ 2.54
LSM14A-204ENST00000585887 TOP2AP11388 1531 aaKnown RBP30.93■■■□□ 2.54
LSM14A-204ENST00000585887 KIF21AQ7Z4S6 1674 aa30.92■■■□□ 2.54
LSM14A-204ENST00000585887 THOC2Q8NI27 1593 aaKnown RBP30.85■■■□□ 2.53
LSM14A-204ENST00000585887 CADPSQ9ULU8 1353 aa30.84■■■□□ 2.53
LSM14A-204ENST00000585887 PDS5BQ9NTI5 1447 aa30.81■■■□□ 2.52
LSM14A-204ENST00000585887 CFTRP13569 1480 aa30.62■■■□□ 2.49
LSM14A-204ENST00000585887 MRC2Q9UBG0 1479 aa30.57■■■□□ 2.48
LSM14A-204ENST00000585887 CEP164Q9UPV0 1460 aa30.55■■■□□ 2.48
LSM14A-204ENST00000585887 PRDM2Q13029 1718 aa30.54■■■□□ 2.48
LSM14A-204ENST00000585887 FANCD2Q9BXW9 1451 aa30.54■■■□□ 2.48
LSM14A-204ENST00000585887 CCDC88BA6NC98 1476 aa30.53■■■□□ 2.48
LSM14A-204ENST00000585887 WDR62O43379 1518 aa30.5■■■□□ 2.47
LSM14A-204ENST00000585887 DNAJC5Q9H3Z4 198 aa30.3■■■□□ 2.44
LSM14A-204ENST00000585887 URB2Q14146 1524 aaKnown RBP30.28■■■□□ 2.44
LSM14A-204ENST00000585887 SUPT5HO00267 1087 aaKnown RBP30.07■■■□□ 2.4
LSM14A-204ENST00000585887 TOPBP1Q92547 1522 aa30.04■■■□□ 2.4
LSM14A-204ENST00000585887 DNMBPQ6XZF7 1577 aa29.99■■■□□ 2.39
LSM14A-204ENST00000585887 ABCC8Q09428 1581 aa29.94■■■□□ 2.38
LSM14A-204ENST00000585887 IFT140Q96RY7 1462 aa29.89■■■□□ 2.38
LSM14A-204ENST00000585887 ZNF608Q9ULD9 1512 aaPredicted RBP29.82■■■□□ 2.36
LSM14A-204ENST00000585887 TARBP1Q13395 1621 aaKnown RBP29.76■■■□□ 2.35
LSM14A-204ENST00000585887 EIF4G3O43432 1585 aaKnown RBP29.75■■■□□ 2.35
LSM14A-204ENST00000585887 POLA1P09884 1462 aaPredicted RBP29.74■■■□□ 2.35
LSM14A-204ENST00000585887 CUX1P39880 1505 aa29.71■■■□□ 2.35
LSM14A-204ENST00000585887 FGD5Q6ZNL6 1462 aa29.65■■■□□ 2.34
LSM14A-204ENST00000585887 RAD54L2Q9Y4B4 1467 aa29.63■■■□□ 2.33
LSM14A-204ENST00000585887 AQRO60306 1485 aaKnown RBP eCLIP29.58■■■□□ 2.33
LSM14A-204ENST00000585887 SOGA1O94964 1423 aa29.58■■■□□ 2.33
LSM14A-204ENST00000585887 OSCARQ8IYS5 282 aa29.53■■■□□ 2.32
LSM14A-204ENST00000585887 WDR97A6NE52 1622 aa29.5■■■□□ 2.31
LSM14A-204ENST00000585887 CHD1O14646 1710 aa29.49■■■□□ 2.31
LSM14A-204ENST00000585887 TDRD9Q8NDG6 1382 aaKnown RBP29.47■■■□□ 2.31
LSM14A-204ENST00000585887 BIVM-ERCC5R4GMW8 1640 aa29.4■■■□□ 2.3
LSM14A-204ENST00000585887 SYNJ1O43426 1573 aa29.38■■■□□ 2.29
LSM14A-204ENST00000585887 TOP2BQ02880 1626 aa29.37■■■□□ 2.29
LSM14A-204ENST00000585887 PBRM1Q86U86 1689 aa29.35■■■□□ 2.29
LSM14A-204ENST00000585887 WRNQ14191 1432 aaPredicted RBP eCLIP29.35■■■□□ 2.29
LSM14A-204ENST00000585887 SNAPC4Q5SXM2 1469 aa29.35■■■□□ 2.29
LSM14A-204ENST00000585887 ABCA10Q8WWZ4 1543 aa29.31■■■□□ 2.28
LSM14A-204ENST00000585887 ABCA5Q8WWZ7 1642 aa29.3■■■□□ 2.28
LSM14A-204ENST00000585887 GRIN2BQ13224 1484 aa29.29■■■□□ 2.28
LSM14A-204ENST00000585887 FBLN2P98095 1184 aa29.27■■■□□ 2.28
LSM14A-204ENST00000585887 GAPVD1Q14C86 1478 aa29.26■■■□□ 2.27
LSM14A-204ENST00000585887 MAGI1Q96QZ7 1491 aaPredicted RBP29.26■■■□□ 2.27
LSM14A-204ENST00000585887 RIMBP3CA6NJZ7 1639 aa29.25■■■□□ 2.27
LSM14A-204ENST00000585887 RIMBP3BA6NNM3 1639 aa29.25■■■□□ 2.27
LSM14A-204ENST00000585887 RIMBP3Q9UFD9 1639 aa29.25■■■□□ 2.27
LSM14A-204ENST00000585887 TRIM41Q8WV44 630 aa29.24■■■□□ 2.27
LSM14A-204ENST00000585887 ARHGEF11O15085 1522 aa29.16■■■□□ 2.26
LSM14A-204ENST00000585887 SYNJ2O15056 1496 aa29.14■■■□□ 2.26
LSM14A-204ENST00000585887 CHMP7Q8WUX9 453 aaPredicted RBP29.1■■■□□ 2.25
LSM14A-204ENST00000585887 CLASP1Q7Z460 1538 aa29.07■■■□□ 2.24
LSM14A-204ENST00000585887 ADAMTS12P58397 1594 aa29.05■■■□□ 2.24
LSM14A-204ENST00000585887 ERICH3Q5RHP9 1530 aa28.96■■■□□ 2.23
LSM14A-204ENST00000585887 GRIN2AQ12879 1464 aa28.94■■■□□ 2.22
LSM14A-204ENST00000585887 ARAP1Q96P48 1450 aa28.91■■■□□ 2.22
LSM14A-204ENST00000585887 FHAD1B1AJZ9 1412 aa28.89■■■□□ 2.22
LSM14A-204ENST00000585887 CEP170Q5SW79 1584 aa28.86■■■□□ 2.21
LSM14A-204ENST00000585887 CYB5RLQ6IPT4 315 aa28.84■■■□□ 2.21
LSM14A-204ENST00000585887 NUP160Q12769 1436 aa28.8■■■□□ 2.2
LSM14A-204ENST00000585887 KIF27Q86VH2 1401 aa28.75■■■□□ 2.19
LSM14A-204ENST00000585887 CUL7Q14999 1698 aa28.69■■■□□ 2.18
LSM14A-204ENST00000585887 SHROOM2Q13796 1616 aa28.69■■■□□ 2.18
LSM14A-204ENST00000585887 ERCC6L2Q5T890 1561 aa28.68■■■□□ 2.18
LSM14A-204ENST00000585887 IGF1RP08069 1367 aa28.63■■■□□ 2.17
LSM14A-204ENST00000585887 RUSC2Q8N2Y8 1516 aa28.63■■■□□ 2.17
LSM14A-204ENST00000585887 CARMIL1Q5VZK9 1371 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms