RNA–Protein interactions for RNA: ENST00000585864.1

SEC11C-203, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11C, Length 1,088 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-203ENST00000585864 NISCHQ9Y2I1 1504 aa39.91■■■■□ 3.98
SEC11C-203ENST00000585864 CCDC180Q9P1Z9 1646 aa35.72■■■■□ 3.31
SEC11C-203ENST00000585864 ABCC9O60706 1549 aa35.52■■■■□ 3.28
SEC11C-203ENST00000585864 RB1CC1Q8TDY2 1594 aa33.98■■■■□ 3.03
SEC11C-203ENST00000585864 NACADO15069 1562 aa33.81■■■■□ 3
SEC11C-203ENST00000585864 DCAF8L2P0C7V8 631 aa33.7■■■□□ 2.99
SEC11C-203ENST00000585864 MYO15BQ96JP2 1530 aa33.45■■■□□ 2.95
SEC11C-203ENST00000585864 DNAJC5BQ9UF47 199 aa33.15■■■□□ 2.9
SEC11C-203ENST00000585864 PABPN1Q86U42 306 aaKnown RBP eCLIP33.13■■■□□ 2.89
SEC11C-203ENST00000585864 ZCCHC6Q5VYS8 1495 aaKnown RBP33.07■■■□□ 2.88
SEC11C-203ENST00000585864 DCAF1Q9Y4B6 1507 aa33.04■■■□□ 2.88
SEC11C-203ENST00000585864 UNC13AQ9UPW8 1703 aa32.97■■■□□ 2.87
SEC11C-203ENST00000585864 BICRAQ9NZM4 1560 aa32.83■■■□□ 2.85
SEC11C-203ENST00000585864 SHROOM4Q9ULL8 1493 aa32.65■■■□□ 2.82
SEC11C-203ENST00000585864 SCRIBQ14160 1630 aa32.46■■■□□ 2.79
SEC11C-203ENST00000585864 CC2D2AQ9P2K1 1620 aa32.08■■■□□ 2.73
SEC11C-203ENST00000585864 EIF4G1Q04637 1599 aaKnown RBP32.08■■■□□ 2.73
SEC11C-203ENST00000585864 CECR2Q9BXF3 1484 aa32.04■■■□□ 2.72
SEC11C-203ENST00000585864 NCAPD3P42695 1498 aa31.22■■■□□ 2.59
SEC11C-203ENST00000585864 ATAD2BQ9ULI0 1458 aa31.08■■■□□ 2.57
SEC11C-203ENST00000585864 SMARCA2P51531 1590 aa31.06■■■□□ 2.56
SEC11C-203ENST00000585864 SMARCA4P51532 1647 aa31.03■■■□□ 2.56
SEC11C-203ENST00000585864 BAZ1AQ9NRL2 1556 aaPredicted RBP31■■■□□ 2.55
SEC11C-203ENST00000585864 HMGXB3Q12766 1538 aa30.95■■■□□ 2.55
SEC11C-203ENST00000585864 BAZ1BQ9UIG0 1483 aaKnown RBP30.82■■■□□ 2.52
SEC11C-203ENST00000585864 PEG3Q9GZU2 1588 aa30.79■■■□□ 2.52
SEC11C-203ENST00000585864 ERCC6Q03468 1493 aa30.75■■■□□ 2.51
SEC11C-203ENST00000585864 MROH2BQ7Z745 1585 aa30.67■■■□□ 2.5
SEC11C-203ENST00000585864 CUX2O14529 1486 aa30.66■■■□□ 2.5
SEC11C-203ENST00000585864 NESP48681 1621 aa30.51■■■□□ 2.47
SEC11C-203ENST00000585864 DNAJC5Q9H3Z4 198 aa30.49■■■□□ 2.47
SEC11C-203ENST00000585864 LAMC3Q9Y6N6 1575 aa30.45■■■□□ 2.47
SEC11C-203ENST00000585864 PDS5BQ9NTI5 1447 aa30.37■■■□□ 2.45
SEC11C-203ENST00000585864 CADPSQ9ULU8 1353 aa30.29■■■□□ 2.44
SEC11C-203ENST00000585864 WIZO95785 1651 aa30.27■■■□□ 2.44
SEC11C-203ENST00000585864 RSF1Q96T23 1441 aaPredicted RBP30.17■■■□□ 2.42
SEC11C-203ENST00000585864 THOC2Q8NI27 1593 aaKnown RBP30.16■■■□□ 2.42
SEC11C-203ENST00000585864 KIF21AQ7Z4S6 1674 aa30.07■■■□□ 2.41
SEC11C-203ENST00000585864 TOP2AP11388 1531 aaKnown RBP30■■■□□ 2.39
SEC11C-203ENST00000585864 MRC2Q9UBG0 1479 aa29.99■■■□□ 2.39
SEC11C-203ENST00000585864 CFTRP13569 1480 aa29.94■■■□□ 2.38
SEC11C-203ENST00000585864 CEP164Q9UPV0 1460 aa29.92■■■□□ 2.38
SEC11C-203ENST00000585864 FANCD2Q9BXW9 1451 aa29.88■■■□□ 2.37
SEC11C-203ENST00000585864 WDR62O43379 1518 aa29.87■■■□□ 2.37
SEC11C-203ENST00000585864 CCDC88BA6NC98 1476 aa29.67■■■□□ 2.34
SEC11C-203ENST00000585864 URB2Q14146 1524 aaKnown RBP29.55■■■□□ 2.32
SEC11C-203ENST00000585864 PRDM2Q13029 1718 aa29.51■■■□□ 2.32
SEC11C-203ENST00000585864 ABCC8Q09428 1581 aa29.43■■■□□ 2.3
SEC11C-203ENST00000585864 OSCARQ8IYS5 282 aa29.38■■■□□ 2.29
SEC11C-203ENST00000585864 IFT140Q96RY7 1462 aa29.35■■■□□ 2.29
SEC11C-203ENST00000585864 TOPBP1Q92547 1522 aa29.3■■■□□ 2.28
SEC11C-203ENST00000585864 DNMBPQ6XZF7 1577 aa29.22■■■□□ 2.27
SEC11C-203ENST00000585864 TRIM41Q8WV44 630 aa29.15■■■□□ 2.26
SEC11C-203ENST00000585864 ZNF608Q9ULD9 1512 aaPredicted RBP29.15■■■□□ 2.26
SEC11C-203ENST00000585864 POLA1P09884 1462 aaPredicted RBP29.01■■■□□ 2.23
SEC11C-203ENST00000585864 SUPT5HO00267 1087 aaKnown RBP29■■■□□ 2.23
SEC11C-203ENST00000585864 EIF4G3O43432 1585 aaKnown RBP28.99■■■□□ 2.23
SEC11C-203ENST00000585864 TARBP1Q13395 1621 aaKnown RBP28.98■■■□□ 2.23
SEC11C-203ENST00000585864 SOGA1O94964 1423 aa28.97■■■□□ 2.23
SEC11C-203ENST00000585864 AQRO60306 1485 aaKnown RBP eCLIP28.97■■■□□ 2.233e-6■■□□□ 13.8
SEC11C-203ENST00000585864 RAD54L2Q9Y4B4 1467 aa28.87■■■□□ 2.21
SEC11C-203ENST00000585864 FGD5Q6ZNL6 1462 aa28.85■■■□□ 2.21
SEC11C-203ENST00000585864 WDR97A6NE52 1622 aa28.85■■■□□ 2.21
SEC11C-203ENST00000585864 FBLN2P98095 1184 aa28.84■■■□□ 2.21
SEC11C-203ENST00000585864 TDRD9Q8NDG6 1382 aaKnown RBP28.84■■■□□ 2.21
SEC11C-203ENST00000585864 CUX1P39880 1505 aa28.81■■■□□ 2.2
SEC11C-203ENST00000585864 RIMBP3CA6NJZ7 1639 aa28.75■■■□□ 2.19
SEC11C-203ENST00000585864 RIMBP3BA6NNM3 1639 aa28.75■■■□□ 2.19
SEC11C-203ENST00000585864 RIMBP3Q9UFD9 1639 aa28.75■■■□□ 2.19
SEC11C-203ENST00000585864 ARHGEF11O15085 1522 aa28.73■■■□□ 2.19
SEC11C-203ENST00000585864 CHMP7Q8WUX9 453 aaPredicted RBP28.71■■■□□ 2.19
SEC11C-203ENST00000585864 GRIN2BQ13224 1484 aa28.7■■■□□ 2.18
SEC11C-203ENST00000585864 CHD1O14646 1710 aa28.69■■■□□ 2.18
SEC11C-203ENST00000585864 MAGI1Q96QZ7 1491 aaPredicted RBP28.68■■■□□ 2.18
SEC11C-203ENST00000585864 SNAPC4Q5SXM2 1469 aa28.66■■■□□ 2.18
SEC11C-203ENST00000585864 CYB5RLQ6IPT4 315 aa28.6■■■□□ 2.17
SEC11C-203ENST00000585864 GAPVD1Q14C86 1478 aa28.59■■■□□ 2.17
SEC11C-203ENST00000585864 ABCA10Q8WWZ4 1543 aa28.59■■■□□ 2.17
SEC11C-203ENST00000585864 WRNQ14191 1432 aaPredicted RBP eCLIP28.58■■■□□ 2.17
SEC11C-203ENST00000585864 SYNJ2O15056 1496 aa28.57■■■□□ 2.16
SEC11C-203ENST00000585864 SYNJ1O43426 1573 aa28.53■■■□□ 2.16
SEC11C-203ENST00000585864 CLASP1Q7Z460 1538 aa28.44■■■□□ 2.14
SEC11C-203ENST00000585864 TOP2BQ02880 1626 aa28.44■■■□□ 2.14
SEC11C-203ENST00000585864 ABCA5Q8WWZ7 1642 aa28.43■■■□□ 2.14
SEC11C-203ENST00000585864 ARAP1Q96P48 1450 aa28.43■■■□□ 2.14
SEC11C-203ENST00000585864 PBRM1Q86U86 1689 aa28.42■■■□□ 2.14
SEC11C-203ENST00000585864 BIVM-ERCC5R4GMW8 1640 aa28.4■■■□□ 2.14
SEC11C-203ENST00000585864 GRIN2AQ12879 1464 aa28.27■■■□□ 2.12
SEC11C-203ENST00000585864 FHAD1B1AJZ9 1412 aa28.27■■■□□ 2.12
SEC11C-203ENST00000585864 TRHP20396 242 aaPredicted RBP28.27■■■□□ 2.12
SEC11C-203ENST00000585864 ERICH3Q5RHP9 1530 aa28.25■■■□□ 2.11
SEC11C-203ENST00000585864 ADAMTS12P58397 1594 aa28.21■■■□□ 2.11
SEC11C-203ENST00000585864 NUP160Q12769 1436 aa28.18■■■□□ 2.1
SEC11C-203ENST00000585864 CEP170Q5SW79 1584 aa28.08■■■□□ 2.09
SEC11C-203ENST00000585864 KIF27Q86VH2 1401 aa28.01■■■□□ 2.07
SEC11C-203ENST00000585864 JPH4Q96JJ6 628 aa28■■■□□ 2.07
SEC11C-203ENST00000585864 SHROOM2Q13796 1616 aa27.98■■■□□ 2.07
SEC11C-203ENST00000585864 IGF1RP08069 1367 aa27.94■■■□□ 2.06
SEC11C-203ENST00000585864 PRG4Q92954 1404 aaPredicted RBP27.92■■■□□ 2.06
SEC11C-203ENST00000585864 ERCC6L2Q5T890 1561 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms