RNA–Protein interactions for RNA: ENST00000585760.5

GCDH-204, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-204ENST00000585760 NISCHQ9Y2I1 1504 aa35.4■■■■□ 3.26
GCDH-204ENST00000585760 ABCC9O60706 1549 aa32.1■■■□□ 2.73
GCDH-204ENST00000585760 CCDC180Q9P1Z9 1646 aa31.61■■■□□ 2.65
GCDH-204ENST00000585760 DNAJC5BQ9UF47 199 aa30.53■■■□□ 2.48
GCDH-204ENST00000585760 RB1CC1Q8TDY2 1594 aa30.35■■■□□ 2.45
GCDH-204ENST00000585760 NACADO15069 1562 aa30.05■■■□□ 2.4
GCDH-204ENST00000585760 DCAF8L2P0C7V8 631 aa29.86■■■□□ 2.37
GCDH-204ENST00000585760 PABPN1Q86U42 306 aaKnown RBP eCLIP29.86■■■□□ 2.37
GCDH-204ENST00000585760 UNC13AQ9UPW8 1703 aa29.56■■■□□ 2.32
GCDH-204ENST00000585760 MYO15BQ96JP2 1530 aa29.5■■■□□ 2.31
GCDH-204ENST00000585760 BICRAQ9NZM4 1560 aa29.45■■■□□ 2.31
GCDH-204ENST00000585760 ZCCHC6Q5VYS8 1495 aaKnown RBP29.42■■■□□ 2.3
GCDH-204ENST00000585760 DCAF1Q9Y4B6 1507 aa29.27■■■□□ 2.28
GCDH-204ENST00000585760 SHROOM4Q9ULL8 1493 aa29.07■■■□□ 2.24
GCDH-204ENST00000585760 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
GCDH-204ENST00000585760 CC2D2AQ9P2K1 1620 aa28.94■■■□□ 2.22
GCDH-204ENST00000585760 SCRIBQ14160 1630 aa28.79■■■□□ 2.2
GCDH-204ENST00000585760 EIF4G1Q04637 1599 aaKnown RBP28.79■■■□□ 2.2
GCDH-204ENST00000585760 DNAJC5Q9H3Z4 198 aa28.4■■■□□ 2.14
GCDH-204ENST00000585760 CUX2O14529 1486 aa27.88■■■□□ 2.05
GCDH-204ENST00000585760 ERCC6Q03468 1493 aa27.78■■■□□ 2.04
GCDH-204ENST00000585760 NCAPD3P42695 1498 aa27.76■■■□□ 2.04
GCDH-204ENST00000585760 ATAD2BQ9ULI0 1458 aa27.6■■■□□ 2.01
GCDH-204ENST00000585760 SMARCA2P51531 1590 aa27.5■■□□□ 1.99
GCDH-204ENST00000585760 HMGXB3Q12766 1538 aa27.49■■□□□ 1.99
GCDH-204ENST00000585760 SMARCA4P51532 1647 aa27.48■■□□□ 1.99
GCDH-204ENST00000585760 NESP48681 1621 aa27.44■■□□□ 1.98
GCDH-204ENST00000585760 BAZ1AQ9NRL2 1556 aaPredicted RBP27.43■■□□□ 1.98
GCDH-204ENST00000585760 BAZ1BQ9UIG0 1483 aaKnown RBP27.32■■□□□ 1.96
GCDH-204ENST00000585760 MROH2BQ7Z745 1585 aa27.27■■□□□ 1.96
GCDH-204ENST00000585760 PEG3Q9GZU2 1588 aa27.22■■□□□ 1.95
GCDH-204ENST00000585760 THOC2Q8NI27 1593 aaKnown RBP27.22■■□□□ 1.95
GCDH-204ENST00000585760 LAMC3Q9Y6N6 1575 aa27.18■■□□□ 1.94
GCDH-204ENST00000585760 PDS5BQ9NTI5 1447 aa27.09■■□□□ 1.93
GCDH-204ENST00000585760 KIF21AQ7Z4S6 1674 aa27.01■■□□□ 1.91
GCDH-204ENST00000585760 TRIM41Q8WV44 630 aa26.96■■□□□ 1.91
GCDH-204ENST00000585760 WIZO95785 1651 aa26.94■■□□□ 1.9
GCDH-204ENST00000585760 CADPSQ9ULU8 1353 aa26.92■■□□□ 1.9
GCDH-204ENST00000585760 RSF1Q96T23 1441 aaPredicted RBP26.91■■□□□ 1.9
GCDH-204ENST00000585760 MRC2Q9UBG0 1479 aa26.86■■□□□ 1.89
GCDH-204ENST00000585760 WDR62O43379 1518 aa26.78■■□□□ 1.88
GCDH-204ENST00000585760 TOP2AP11388 1531 aaKnown RBP26.65■■□□□ 1.86
GCDH-204ENST00000585760 CEP164Q9UPV0 1460 aa26.65■■□□□ 1.86
GCDH-204ENST00000585760 FANCD2Q9BXW9 1451 aa26.59■■□□□ 1.85
GCDH-204ENST00000585760 OSCARQ8IYS5 282 aa26.58■■□□□ 1.85
GCDH-204ENST00000585760 CFTRP13569 1480 aa26.49■■□□□ 1.83
GCDH-204ENST00000585760 CCDC88BA6NC98 1476 aa26.38■■□□□ 1.81
GCDH-204ENST00000585760 URB2Q14146 1524 aaKnown RBP26.38■■□□□ 1.81
GCDH-204ENST00000585760 RIMBP3CA6NJZ7 1639 aa26.17■■□□□ 1.78
GCDH-204ENST00000585760 RIMBP3BA6NNM3 1639 aa26.17■■□□□ 1.78
GCDH-204ENST00000585760 RIMBP3Q9UFD9 1639 aa26.17■■□□□ 1.78
GCDH-204ENST00000585760 IFT140Q96RY7 1462 aa26.15■■□□□ 1.78
GCDH-204ENST00000585760 ZNF608Q9ULD9 1512 aaPredicted RBP26.13■■□□□ 1.77
GCDH-204ENST00000585760 SUPT5HO00267 1087 aaKnown RBP26.12■■□□□ 1.77
GCDH-204ENST00000585760 PRDM2Q13029 1718 aa26.11■■□□□ 1.77
GCDH-204ENST00000585760 ARHGEF11O15085 1522 aa26.09■■□□□ 1.77
GCDH-204ENST00000585760 TOPBP1Q92547 1522 aa26.02■■□□□ 1.76
GCDH-204ENST00000585760 CYB5RLQ6IPT4 315 aa25.97■■□□□ 1.75
GCDH-204ENST00000585760 ABCC8Q09428 1581 aa25.96■■□□□ 1.75
GCDH-204ENST00000585760 EIF4G3O43432 1585 aaKnown RBP25.92■■□□□ 1.74
GCDH-204ENST00000585760 DNMBPQ6XZF7 1577 aa25.87■■□□□ 1.73
GCDH-204ENST00000585760 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.73
GCDH-204ENST00000585760 TRHP20396 242 aaPredicted RBP25.84■■□□□ 1.73
GCDH-204ENST00000585760 FBLN2P98095 1184 aa25.82■■□□□ 1.72
GCDH-204ENST00000585760 ARAP1Q96P48 1450 aa25.79■■□□□ 1.72
GCDH-204ENST00000585760 TARBP1Q13395 1621 aaKnown RBP25.79■■□□□ 1.72
GCDH-204ENST00000585760 CHD1O14646 1710 aa25.79■■□□□ 1.72
GCDH-204ENST00000585760 POLA1P09884 1462 aaPredicted RBP25.73■■□□□ 1.71
GCDH-204ENST00000585760 RAD54L2Q9Y4B4 1467 aa25.65■■□□□ 1.7
GCDH-204ENST00000585760 TDRD9Q8NDG6 1382 aaKnown RBP25.64■■□□□ 1.69
GCDH-204ENST00000585760 SOGA1O94964 1423 aa25.63■■□□□ 1.69
GCDH-204ENST00000585760 CUX1P39880 1505 aa25.59■■□□□ 1.69
GCDH-204ENST00000585760 CHMP7Q8WUX9 453 aaPredicted RBP25.57■■□□□ 1.68
GCDH-204ENST00000585760 SNAPC4Q5SXM2 1469 aa25.57■■□□□ 1.68
GCDH-204ENST00000585760 FGD5Q6ZNL6 1462 aa25.54■■□□□ 1.68
GCDH-204ENST00000585760 CLASP1Q7Z460 1538 aa25.53■■□□□ 1.68
GCDH-204ENST00000585760 WDR97A6NE52 1622 aa25.52■■□□□ 1.68
GCDH-204ENST00000585760 SYNJ1O43426 1573 aa25.49■■□□□ 1.67
GCDH-204ENST00000585760 MAGI1Q96QZ7 1491 aaPredicted RBP25.49■■□□□ 1.67
GCDH-204ENST00000585760 GRIN2BQ13224 1484 aa25.46■■□□□ 1.67
GCDH-204ENST00000585760 AEBP2Q6ZN18 517 aaPredicted RBP25.43■■□□□ 1.66
GCDH-204ENST00000585760 SYNJ2O15056 1496 aa25.42■■□□□ 1.66
GCDH-204ENST00000585760 WRNQ14191 1432 aaPredicted RBP eCLIP25.37■■□□□ 1.65
GCDH-204ENST00000585760 GAPVD1Q14C86 1478 aa25.33■■□□□ 1.65
GCDH-204ENST00000585760 TOP2BQ02880 1626 aa25.3■■□□□ 1.64
GCDH-204ENST00000585760 ABCA10Q8WWZ4 1543 aa25.29■■□□□ 1.64
GCDH-204ENST00000585760 BIVM-ERCC5R4GMW8 1640 aa25.28■■□□□ 1.64
GCDH-204ENST00000585760 PBRM1Q86U86 1689 aa25.23■■□□□ 1.63
GCDH-204ENST00000585760 ABCA5Q8WWZ7 1642 aa25.16■■□□□ 1.62
GCDH-204ENST00000585760 GRIN2AQ12879 1464 aa25.11■■□□□ 1.61
GCDH-204ENST00000585760 ERCC6L2Q5T890 1561 aa25.09■■□□□ 1.61
GCDH-204ENST00000585760 NUP160Q12769 1436 aa25.05■■□□□ 1.6
GCDH-204ENST00000585760 CEP170Q5SW79 1584 aa25.04■■□□□ 1.6
GCDH-204ENST00000585760 ADAMTS12P58397 1594 aa25.01■■□□□ 1.59
GCDH-204ENST00000585760 ERICH3Q5RHP9 1530 aa24.98■■□□□ 1.59
GCDH-204ENST00000585760 FHAD1B1AJZ9 1412 aa24.97■■□□□ 1.59
GCDH-204ENST00000585760 SHROOM2Q13796 1616 aa24.94■■□□□ 1.58
GCDH-204ENST00000585760 KIF27Q86VH2 1401 aa24.88■■□□□ 1.57
GCDH-204ENST00000585760 PRG4Q92954 1404 aaPredicted RBP24.86■■□□□ 1.57
GCDH-204ENST00000585760 JPH4Q96JJ6 628 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms