RNA–Protein interactions for RNA: ENST00000585731.5

TCF3-205, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-205ENST00000585731 NISCHQ9Y2I1 1504 aa34.99■■■■□ 3.19
TCF3-205ENST00000585731 ABCC9O60706 1549 aa31.44■■■□□ 2.62
TCF3-205ENST00000585731 CCDC180Q9P1Z9 1646 aa31.42■■■□□ 2.62
TCF3-205ENST00000585731 RB1CC1Q8TDY2 1594 aa30.03■■■□□ 2.4
TCF3-205ENST00000585731 NACADO15069 1562 aa29.83■■■□□ 2.37
TCF3-205ENST00000585731 DCAF8L2P0C7V8 631 aa29.56■■■□□ 2.32
TCF3-205ENST00000585731 DNAJC5BQ9UF47 199 aa29.54■■■□□ 2.32
TCF3-205ENST00000585731 MYO15BQ96JP2 1530 aa29.5■■■□□ 2.31
TCF3-205ENST00000585731 PABPN1Q86U42 306 aaKnown RBP eCLIP29.27■■■□□ 2.283e-7■□□□□ 8.9
TCF3-205ENST00000585731 DCAF1Q9Y4B6 1507 aa29.03■■■□□ 2.24
TCF3-205ENST00000585731 UNC13AQ9UPW8 1703 aa28.99■■■□□ 2.23
TCF3-205ENST00000585731 BICRAQ9NZM4 1560 aa28.98■■■□□ 2.23
TCF3-205ENST00000585731 ZCCHC6Q5VYS8 1495 aaKnown RBP28.97■■■□□ 2.23
TCF3-205ENST00000585731 SHROOM4Q9ULL8 1493 aa28.94■■■□□ 2.22
TCF3-205ENST00000585731 SCRIBQ14160 1630 aa28.48■■■□□ 2.15
TCF3-205ENST00000585731 CECR2Q9BXF3 1484 aa28.44■■■□□ 2.14
TCF3-205ENST00000585731 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
TCF3-205ENST00000585731 EIF4G1Q04637 1599 aaKnown RBP28.37■■■□□ 2.13
TCF3-205ENST00000585731 NCAPD3P42695 1498 aa27.57■■■□□ 2
TCF3-205ENST00000585731 DNAJC5Q9H3Z4 198 aa27.42■■□□□ 1.98
TCF3-205ENST00000585731 ATAD2BQ9ULI0 1458 aa27.38■■□□□ 1.97
TCF3-205ENST00000585731 SMARCA2P51531 1590 aa27.36■■□□□ 1.97
TCF3-205ENST00000585731 CUX2O14529 1486 aa27.34■■□□□ 1.97
TCF3-205ENST00000585731 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
TCF3-205ENST00000585731 ERCC6Q03468 1493 aa27.29■■□□□ 1.96
TCF3-205ENST00000585731 SMARCA4P51532 1647 aa27.24■■□□□ 1.95
TCF3-205ENST00000585731 BAZ1AQ9NRL2 1556 aaPredicted RBP27.22■■□□□ 1.95
TCF3-205ENST00000585731 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
TCF3-205ENST00000585731 PEG3Q9GZU2 1588 aa27.09■■□□□ 1.93
TCF3-205ENST00000585731 NESP48681 1621 aa26.92■■□□□ 1.9
TCF3-205ENST00000585731 LAMC3Q9Y6N6 1575 aa26.91■■□□□ 1.9
TCF3-205ENST00000585731 MROH2BQ7Z745 1585 aa26.86■■□□□ 1.89
TCF3-205ENST00000585731 PDS5BQ9NTI5 1447 aa26.86■■□□□ 1.89
TCF3-205ENST00000585731 CADPSQ9ULU8 1353 aa26.72■■□□□ 1.87
TCF3-205ENST00000585731 THOC2Q8NI27 1593 aaKnown RBP26.7■■□□□ 1.86
TCF3-205ENST00000585731 AEBP2Q6ZN18 517 aaPredicted RBP26.55■■□□□ 1.84
TCF3-205ENST00000585731 MRC2Q9UBG0 1479 aa26.52■■□□□ 1.84
TCF3-205ENST00000585731 KIF21AQ7Z4S6 1674 aa26.5■■□□□ 1.83
TCF3-205ENST00000585731 WIZO95785 1651 aa26.44■■□□□ 1.82
TCF3-205ENST00000585731 WDR62O43379 1518 aa26.43■■□□□ 1.82
TCF3-205ENST00000585731 CEP164Q9UPV0 1460 aa26.4■■□□□ 1.82
TCF3-205ENST00000585731 CFTRP13569 1480 aa26.36■■□□□ 1.81
TCF3-205ENST00000585731 RSF1Q96T23 1441 aaPredicted RBP26.36■■□□□ 1.81
TCF3-205ENST00000585731 FANCD2Q9BXW9 1451 aa26.35■■□□□ 1.81
TCF3-205ENST00000585731 TOP2AP11388 1531 aaKnown RBP26.27■■□□□ 1.8
TCF3-205ENST00000585731 OSCARQ8IYS5 282 aa26.11■■□□□ 1.77
TCF3-205ENST00000585731 URB2Q14146 1524 aaKnown RBP26.04■■□□□ 1.76
TCF3-205ENST00000585731 TRIM41Q8WV44 630 aa26.04■■□□□ 1.76
TCF3-205ENST00000585731 CCDC88BA6NC98 1476 aa25.96■■□□□ 1.75
TCF3-205ENST00000585731 ABCC8Q09428 1581 aa25.94■■□□□ 1.74
TCF3-205ENST00000585731 IFT140Q96RY7 1462 aa25.93■■□□□ 1.74
TCF3-205ENST00000585731 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
TCF3-205ENST00000585731 TOPBP1Q92547 1522 aa25.79■■□□□ 1.72
TCF3-205ENST00000585731 ZNF608Q9ULD9 1512 aaPredicted RBP25.72■■□□□ 1.71
TCF3-205ENST00000585731 DNMBPQ6XZF7 1577 aa25.71■■□□□ 1.71
TCF3-205ENST00000585731 EIF4G3O43432 1585 aaKnown RBP25.56■■□□□ 1.68
TCF3-205ENST00000585731 ARHGEF11O15085 1522 aa25.53■■□□□ 1.68
TCF3-205ENST00000585731 POLA1P09884 1462 aaPredicted RBP25.53■■□□□ 1.68
TCF3-205ENST00000585731 RIMBP3CA6NJZ7 1639 aa25.52■■□□□ 1.68
TCF3-205ENST00000585731 RIMBP3BA6NNM3 1639 aa25.52■■□□□ 1.68
TCF3-205ENST00000585731 RIMBP3Q9UFD9 1639 aa25.52■■□□□ 1.68
TCF3-205ENST00000585731 AQRO60306 1485 aaKnown RBP eCLIP25.52■■□□□ 1.683e-8■■■■□ 23.3
TCF3-205ENST00000585731 TARBP1Q13395 1621 aaKnown RBP25.52■■□□□ 1.68
TCF3-205ENST00000585731 SOGA1O94964 1423 aa25.48■■□□□ 1.67
TCF3-205ENST00000585731 WDR97A6NE52 1622 aa25.45■■□□□ 1.67
TCF3-205ENST00000585731 FBLN2P98095 1184 aa25.44■■□□□ 1.66
TCF3-205ENST00000585731 CYB5RLQ6IPT4 315 aa25.39■■□□□ 1.66
TCF3-205ENST00000585731 TDRD9Q8NDG6 1382 aaKnown RBP25.37■■□□□ 1.65
TCF3-205ENST00000585731 RAD54L2Q9Y4B4 1467 aa25.36■■□□□ 1.65
TCF3-205ENST00000585731 CHMP7Q8WUX9 453 aaPredicted RBP25.33■■□□□ 1.65
TCF3-205ENST00000585731 FGD5Q6ZNL6 1462 aa25.33■■□□□ 1.65
TCF3-205ENST00000585731 CHIC1Q5VXU3 224 aa25.32■■□□□ 1.64
TCF3-205ENST00000585731 MAGI1Q96QZ7 1491 aaPredicted RBP25.32■■□□□ 1.64
TCF3-205ENST00000585731 GRIN2BQ13224 1484 aa25.29■■□□□ 1.64
TCF3-205ENST00000585731 CHD1O14646 1710 aa25.28■■□□□ 1.64
TCF3-205ENST00000585731 SNAPC4Q5SXM2 1469 aa25.27■■□□□ 1.64
TCF3-205ENST00000585731 CUX1P39880 1505 aa25.25■■□□□ 1.63
TCF3-205ENST00000585731 ARAP1Q96P48 1450 aa25.24■■□□□ 1.63
TCF3-205ENST00000585731 SYNJ2O15056 1496 aa25.21■■□□□ 1.63
TCF3-205ENST00000585731 SYNJ1O43426 1573 aa25.21■■□□□ 1.63
TCF3-205ENST00000585731 TRHP20396 242 aaPredicted RBP25.17■■□□□ 1.62
TCF3-205ENST00000585731 CLASP1Q7Z460 1538 aa25.16■■□□□ 1.62
TCF3-205ENST00000585731 GAPVD1Q14C86 1478 aa25.15■■□□□ 1.62
TCF3-205ENST00000585731 ABCA10Q8WWZ4 1543 aa25.12■■□□□ 1.61
TCF3-205ENST00000585731 WRNQ14191 1432 aaPredicted RBP eCLIP25.07■■□□□ 1.6
TCF3-205ENST00000585731 SUPT5HO00267 1087 aaKnown RBP25.06■■□□□ 1.6
TCF3-205ENST00000585731 ABCA5Q8WWZ7 1642 aa24.98■■□□□ 1.59
TCF3-205ENST00000585731 PBRM1Q86U86 1689 aa24.94■■□□□ 1.58
TCF3-205ENST00000585731 GRIN2AQ12879 1464 aa24.91■■□□□ 1.58
TCF3-205ENST00000585731 FHAD1B1AJZ9 1412 aa24.88■■□□□ 1.57
TCF3-205ENST00000585731 TOP2BQ02880 1626 aa24.87■■□□□ 1.57
TCF3-205ENST00000585731 NUP160Q12769 1436 aa24.86■■□□□ 1.57
TCF3-205ENST00000585731 ERICH3Q5RHP9 1530 aa24.83■■□□□ 1.57
TCF3-205ENST00000585731 BIVM-ERCC5R4GMW8 1640 aa24.82■■□□□ 1.56
TCF3-205ENST00000585731 ADAMTS12P58397 1594 aa24.8■■□□□ 1.56
TCF3-205ENST00000585731 CEP170Q5SW79 1584 aa24.71■■□□□ 1.55
TCF3-205ENST00000585731 SHROOM2Q13796 1616 aa24.67■■□□□ 1.54
TCF3-205ENST00000585731 JPH4Q96JJ6 628 aa24.65■■□□□ 1.54
TCF3-205ENST00000585731 PRG4Q92954 1404 aaPredicted RBP24.61■■□□□ 1.53
TCF3-205ENST00000585731 ERCC6L2Q5T890 1561 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms