RNA–Protein interactions for RNA: ENST00000585554.5

U2AF1L4-204, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 2

Gene U2AF1L4, Length 1,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-204ENST00000585554 NISCHQ9Y2I1 1504 aa30.01■■■□□ 2.39
U2AF1L4-204ENST00000585554 ABCC9O60706 1549 aa26.4■■□□□ 1.82
U2AF1L4-204ENST00000585554 CCDC180Q9P1Z9 1646 aa26.37■■□□□ 1.81
U2AF1L4-204ENST00000585554 DNAJC5BQ9UF47 199 aa25.28■■□□□ 1.64
U2AF1L4-204ENST00000585554 ZCCHC6Q5VYS8 1495 aaKnown RBP25.15■■□□□ 1.62
U2AF1L4-204ENST00000585554 DCAF1Q9Y4B6 1507 aa24.87■■□□□ 1.57
U2AF1L4-204ENST00000585554 RB1CC1Q8TDY2 1594 aa24.82■■□□□ 1.56
U2AF1L4-204ENST00000585554 DCAF8L2P0C7V8 631 aa24.8■■□□□ 1.56
U2AF1L4-204ENST00000585554 MYO15BQ96JP2 1530 aa24.72■■□□□ 1.55
U2AF1L4-204ENST00000585554 NACADO15069 1562 aa24.64■■□□□ 1.54
U2AF1L4-204ENST00000585554 PABPN1Q86U42 306 aaKnown RBP eCLIP24.48■■□□□ 1.51
U2AF1L4-204ENST00000585554 UNC13AQ9UPW8 1703 aa24.31■■□□□ 1.48
U2AF1L4-204ENST00000585554 BICRAQ9NZM4 1560 aa24.18■■□□□ 1.46
U2AF1L4-204ENST00000585554 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
U2AF1L4-204ENST00000585554 SCRIBQ14160 1630 aa24.11■■□□□ 1.45
U2AF1L4-204ENST00000585554 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
U2AF1L4-204ENST00000585554 CC2D2AQ9P2K1 1620 aa23.81■■□□□ 1.4
U2AF1L4-204ENST00000585554 EIF4G1Q04637 1599 aaKnown RBP23.61■■□□□ 1.37
U2AF1L4-204ENST00000585554 DNAJC5Q9H3Z4 198 aa23.56■■□□□ 1.36
U2AF1L4-204ENST00000585554 BAZ1AQ9NRL2 1556 aaPredicted RBP23.22■■□□□ 1.31
U2AF1L4-204ENST00000585554 SMARCA4P51532 1647 aa23.13■■□□□ 1.29
U2AF1L4-204ENST00000585554 RSF1Q96T23 1441 aaPredicted RBP23.13■■□□□ 1.29
U2AF1L4-204ENST00000585554 MROH2BQ7Z745 1585 aa23.13■■□□□ 1.29
U2AF1L4-204ENST00000585554 SUPT5HO00267 1087 aaKnown RBP23.06■■□□□ 1.28
U2AF1L4-204ENST00000585554 CUX2O14529 1486 aa22.92■■□□□ 1.26
U2AF1L4-204ENST00000585554 WIZO95785 1651 aa22.91■■□□□ 1.26
U2AF1L4-204ENST00000585554 PEG3Q9GZU2 1588 aa22.9■■□□□ 1.26
U2AF1L4-204ENST00000585554 SMARCA2P51531 1590 aa22.85■■□□□ 1.25
U2AF1L4-204ENST00000585554 ATAD2BQ9ULI0 1458 aa22.84■■□□□ 1.25
U2AF1L4-204ENST00000585554 ERCC6Q03468 1493 aa22.79■■□□□ 1.24
U2AF1L4-204ENST00000585554 NCAPD3P42695 1498 aa22.73■■□□□ 1.23
U2AF1L4-204ENST00000585554 TOP2AP11388 1531 aaKnown RBP22.72■■□□□ 1.23
U2AF1L4-204ENST00000585554 BAZ1BQ9UIG0 1483 aaKnown RBP22.7■■□□□ 1.22
U2AF1L4-204ENST00000585554 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
U2AF1L4-204ENST00000585554 NESP48681 1621 aa22.53■■□□□ 1.2
U2AF1L4-204ENST00000585554 CCDC88BA6NC98 1476 aa22.45■■□□□ 1.18
U2AF1L4-204ENST00000585554 THOC2Q8NI27 1593 aaKnown RBP22.41■■□□□ 1.18
U2AF1L4-204ENST00000585554 TRIM41Q8WV44 630 aa22.33■■□□□ 1.17
U2AF1L4-204ENST00000585554 LAMC3Q9Y6N6 1575 aa22.21■■□□□ 1.15
U2AF1L4-204ENST00000585554 KIF21AQ7Z4S6 1674 aa22.21■■□□□ 1.15
U2AF1L4-204ENST00000585554 CFTRP13569 1480 aa22.12■■□□□ 1.13
U2AF1L4-204ENST00000585554 CADPSQ9ULU8 1353 aa22.11■■□□□ 1.13
U2AF1L4-204ENST00000585554 PDS5BQ9NTI5 1447 aa22.08■■□□□ 1.13
U2AF1L4-204ENST00000585554 PRDM2Q13029 1718 aa21.99■■□□□ 1.11
U2AF1L4-204ENST00000585554 MRC2Q9UBG0 1479 aa21.97■■□□□ 1.11
U2AF1L4-204ENST00000585554 WDR62O43379 1518 aa21.95■■□□□ 1.1
U2AF1L4-204ENST00000585554 CHIC1Q5VXU3 224 aa21.94■■□□□ 1.1
U2AF1L4-204ENST00000585554 FANCD2Q9BXW9 1451 aa21.84■■□□□ 1.09
U2AF1L4-204ENST00000585554 ABCC8Q09428 1581 aa21.83■■□□□ 1.09
U2AF1L4-204ENST00000585554 WRNQ14191 1432 aaPredicted RBP eCLIP21.8■■□□□ 1.08
U2AF1L4-204ENST00000585554 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.07
U2AF1L4-204ENST00000585554 OSCARQ8IYS5 282 aa21.76■■□□□ 1.07
U2AF1L4-204ENST00000585554 SYNJ1O43426 1573 aa21.68■■□□□ 1.06
U2AF1L4-204ENST00000585554 TOP2BQ02880 1626 aa21.66■■□□□ 1.06
U2AF1L4-204ENST00000585554 CUX1P39880 1505 aa21.66■■□□□ 1.06
U2AF1L4-204ENST00000585554 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
U2AF1L4-204ENST00000585554 RIMBP3CA6NJZ7 1639 aa21.62■■□□□ 1.05
U2AF1L4-204ENST00000585554 RIMBP3BA6NNM3 1639 aa21.62■■□□□ 1.05
U2AF1L4-204ENST00000585554 RIMBP3Q9UFD9 1639 aa21.62■■□□□ 1.05
U2AF1L4-204ENST00000585554 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
U2AF1L4-204ENST00000585554 URB2Q14146 1524 aaKnown RBP21.59■■□□□ 1.05
U2AF1L4-204ENST00000585554 TOPBP1Q92547 1522 aa21.57■■□□□ 1.04
U2AF1L4-204ENST00000585554 ARHGEF11O15085 1522 aa21.49■■□□□ 1.03
U2AF1L4-204ENST00000585554 FGD5Q6ZNL6 1462 aa21.48■■□□□ 1.03
U2AF1L4-204ENST00000585554 POLA1P09884 1462 aaPredicted RBP21.43■■□□□ 1.02
U2AF1L4-204ENST00000585554 ZNF608Q9ULD9 1512 aaPredicted RBP21.43■■□□□ 1.02
U2AF1L4-204ENST00000585554 SOGA1O94964 1423 aa21.37■■□□□ 1.01
U2AF1L4-204ENST00000585554 EEA1Q15075 1411 aa21.37■■□□□ 1.01
U2AF1L4-204ENST00000585554 IFT140Q96RY7 1462 aa21.33■■□□□ 1.01
U2AF1L4-204ENST00000585554 CYB5RLQ6IPT4 315 aa21.33■■□□□ 1.01
U2AF1L4-204ENST00000585554 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
U2AF1L4-204ENST00000585554 ABCA10Q8WWZ4 1543 aa21.31■■□□□ 1
U2AF1L4-204ENST00000585554 KIF27Q86VH2 1401 aa21.29■■□□□ 1
U2AF1L4-204ENST00000585554 FAM9AQ8IZU1 332 aaPredicted RBP21.29■■□□□ 1
U2AF1L4-204ENST00000585554 RUSC2Q8N2Y8 1516 aa21.28■■□□□ 1
U2AF1L4-204ENST00000585554 EIF4G3O43432 1585 aaKnown RBP21.27■■□□□ 1
U2AF1L4-204ENST00000585554 TARBP1Q13395 1621 aaKnown RBP21.27■■□□□ 1
U2AF1L4-204ENST00000585554 WDR97A6NE52 1622 aa21.26■□□□□ 0.99
U2AF1L4-204ENST00000585554 TRHP20396 242 aaPredicted RBP21.26■□□□□ 0.99
U2AF1L4-204ENST00000585554 ARAP1Q96P48 1450 aa21.24■□□□□ 0.99
U2AF1L4-204ENST00000585554 CHD1O14646 1710 aa21.22■□□□□ 0.99
U2AF1L4-204ENST00000585554 CSRNP3Q8WYN3 585 aa21.22■□□□□ 0.99
U2AF1L4-204ENST00000585554 ABCA5Q8WWZ7 1642 aa21.16■□□□□ 0.98
U2AF1L4-204ENST00000585554 TDRD9Q8NDG6 1382 aaKnown RBP21.14■□□□□ 0.98
U2AF1L4-204ENST00000585554 AQRO60306 1485 aaKnown RBP eCLIP21.13■□□□□ 0.97
U2AF1L4-204ENST00000585554 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
U2AF1L4-204ENST00000585554 IGF1RP08069 1367 aa21.1■□□□□ 0.97
U2AF1L4-204ENST00000585554 FBLN2P98095 1184 aa21.08■□□□□ 0.97
U2AF1L4-204ENST00000585554 ERICH3Q5RHP9 1530 aa21.08■□□□□ 0.96
U2AF1L4-204ENST00000585554 KIF21BO75037 1637 aa21.07■□□□□ 0.96
U2AF1L4-204ENST00000585554 PRXQ9BXM0 1461 aa21.05■□□□□ 0.96
U2AF1L4-204ENST00000585554 AEBP2Q6ZN18 517 aaPredicted RBP21.04■□□□□ 0.96
U2AF1L4-204ENST00000585554 GRIN2BQ13224 1484 aa21.04■□□□□ 0.96
U2AF1L4-204ENST00000585554 PBRM1Q86U86 1689 aa21.03■□□□□ 0.96
U2AF1L4-204ENST00000585554 LOC105371045A0A1W2PR82 267 aa21.03■□□□□ 0.96
U2AF1L4-204ENST00000585554 CUL7Q14999 1698 aa21.02■□□□□ 0.95
U2AF1L4-204ENST00000585554 GOLGA3Q08378 1498 aa21.01■□□□□ 0.95
U2AF1L4-204ENST00000585554 CARMIL1Q5VZK9 1371 aa21.01■□□□□ 0.95
U2AF1L4-204ENST00000585554 RAPGEF2Q9Y4G8 1499 aa20.96■□□□□ 0.95
U2AF1L4-204ENST00000585554 CLASP1Q7Z460 1538 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms