RNA–Protein interactions for RNA: ENST00000585421.5

TIMP2-203, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

TSL 3 BASIC

Gene TIMP2, Length 3,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-203ENST00000585421 NISCHQ9Y2I1 1504 aa21.02■□□□□ 0.95
TIMP2-203ENST00000585421 CCDC180Q9P1Z9 1646 aa18.17■□□□□ 0.5
TIMP2-203ENST00000585421 DCAF8L2P0C7V8 631 aa17.78■□□□□ 0.44
TIMP2-203ENST00000585421 ZCCHC6Q5VYS8 1495 aaKnown RBP17.63■□□□□ 0.41
TIMP2-203ENST00000585421 ABCC9O60706 1549 aa17.61■□□□□ 0.41
TIMP2-203ENST00000585421 SHROOM4Q9ULL8 1493 aa17.51■□□□□ 0.39
TIMP2-203ENST00000585421 DCAF1Q9Y4B6 1507 aa17.18■□□□□ 0.34
TIMP2-203ENST00000585421 SCRIBQ14160 1630 aa17.01■□□□□ 0.31
TIMP2-203ENST00000585421 NACADO15069 1562 aa16.99■□□□□ 0.31
TIMP2-203ENST00000585421 MYO15BQ96JP2 1530 aa16.95■□□□□ 0.3
TIMP2-203ENST00000585421 RB1CC1Q8TDY2 1594 aa16.91■□□□□ 0.3
TIMP2-203ENST00000585421 SUPT5HO00267 1087 aaKnown RBP16.79■□□□□ 0.28
TIMP2-203ENST00000585421 PABPN1Q86U42 306 aaKnown RBP eCLIP16.7■□□□□ 0.26
TIMP2-203ENST00000585421 UNC13AQ9UPW8 1703 aa16.62■□□□□ 0.25
TIMP2-203ENST00000585421 CECR2Q9BXF3 1484 aa16.5■□□□□ 0.23
TIMP2-203ENST00000585421 BICRAQ9NZM4 1560 aa16.47■□□□□ 0.23
TIMP2-203ENST00000585421 RSF1Q96T23 1441 aaPredicted RBP16.36■□□□□ 0.21
TIMP2-203ENST00000585421 MROH2BQ7Z745 1585 aa16.33■□□□□ 0.21
TIMP2-203ENST00000585421 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
TIMP2-203ENST00000585421 WIZO95785 1651 aa16.2■□□□□ 0.18
TIMP2-203ENST00000585421 BAZ1AQ9NRL2 1556 aaPredicted RBP16.19■□□□□ 0.18
TIMP2-203ENST00000585421 SMARCA4P51532 1647 aa16.16■□□□□ 0.18
TIMP2-203ENST00000585421 EIF4G1Q04637 1599 aaKnown RBP16■□□□□ 0.15
TIMP2-203ENST00000585421 ATAD2BQ9ULI0 1458 aa15.95■□□□□ 0.14
TIMP2-203ENST00000585421 TOP2AP11388 1531 aaKnown RBP15.91■□□□□ 0.14
TIMP2-203ENST00000585421 CHIC1Q5VXU3 224 aa15.89■□□□□ 0.13
TIMP2-203ENST00000585421 HRCP23327 699 aa15.88■□□□□ 0.13
TIMP2-203ENST00000585421 BAZ1BQ9UIG0 1483 aaKnown RBP15.87■□□□□ 0.13
TIMP2-203ENST00000585421 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
TIMP2-203ENST00000585421 SMARCA2P51531 1590 aa15.84■□□□□ 0.13
TIMP2-203ENST00000585421 PEG3Q9GZU2 1588 aa15.84■□□□□ 0.13
TIMP2-203ENST00000585421 MYT1Q01538 1121 aa15.84■□□□□ 0.13
TIMP2-203ENST00000585421 CC2D2AQ9P2K1 1620 aa15.8■□□□□ 0.12
TIMP2-203ENST00000585421 NCAPD3P42695 1498 aa15.74■□□□□ 0.11
TIMP2-203ENST00000585421 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
TIMP2-203ENST00000585421 HMGXB3Q12766 1538 aa15.67■□□□□ 0.1
TIMP2-203ENST00000585421 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
TIMP2-203ENST00000585421 ABCC8Q09428 1581 aa15.6■□□□□ 0.09
TIMP2-203ENST00000585421 FAM9AQ8IZU1 332 aaPredicted RBP15.57■□□□□ 0.08
TIMP2-203ENST00000585421 PPARGC1BQ86YN6 1023 aaKnown RBP15.57■□□□□ 0.08
TIMP2-203ENST00000585421 EHMT2Q96KQ7 1210 aa15.52■□□□□ 0.08
TIMP2-203ENST00000585421 NESP48681 1621 aa15.45■□□□□ 0.06
TIMP2-203ENST00000585421 LOC105371045A0A1W2PR82 267 aa15.44■□□□□ 0.06
TIMP2-203ENST00000585421 CFTRP13569 1480 aa15.41■□□□□ 0.06
TIMP2-203ENST00000585421 CADPSQ9ULU8 1353 aa15.41■□□□□ 0.06
TIMP2-203ENST00000585421 WRNQ14191 1432 aaPredicted RBP eCLIP15.4■□□□□ 0.06
TIMP2-203ENST00000585421 SCAF1Q9H7N4 1312 aaKnown RBP15.38■□□□□ 0.05
TIMP2-203ENST00000585421 SYNJ1O43426 1573 aa15.36■□□□□ 0.05
TIMP2-203ENST00000585421 PCGF6Q9BYE7 350 aa15.33■□□□□ 0.04
TIMP2-203ENST00000585421 SOGA1O94964 1423 aa15.3■□□□□ 0.04
TIMP2-203ENST00000585421 RUSC2Q8N2Y8 1516 aa15.28■□□□□ 0.04
TIMP2-203ENST00000585421 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.04
TIMP2-203ENST00000585421 CUX1P39880 1505 aa15.25■□□□□ 0.03
TIMP2-203ENST00000585421 PRDM2Q13029 1718 aa15.19■□□□□ 0.02
TIMP2-203ENST00000585421 TOP2BQ02880 1626 aa15.18■□□□□ 0.02
TIMP2-203ENST00000585421 LAMC3Q9Y6N6 1575 aa15.18■□□□□ 0.02
TIMP2-203ENST00000585421 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
TIMP2-203ENST00000585421 PDS5BQ9NTI5 1447 aa15.14■□□□□ 0.01
TIMP2-203ENST00000585421 KIF21AQ7Z4S6 1674 aa15.13■□□□□ 0.01
TIMP2-203ENST00000585421 BIVM-ERCC5R4GMW8 1640 aa15.12■□□□□ 0.01
TIMP2-203ENST00000585421 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
TIMP2-203ENST00000585421 FGD5Q6ZNL6 1462 aa15.11■□□□□ 0.01
TIMP2-203ENST00000585421 URB2Q14146 1524 aaKnown RBP15.1■□□□□ 0.01
TIMP2-203ENST00000585421 TOPBP1Q92547 1522 aa15.08■□□□□ 0.01
TIMP2-203ENST00000585421 RAD54L2Q9Y4B4 1467 aa15.08■□□□□ 0
TIMP2-203ENST00000585421 ERCC6Q03468 1493 aa15.05■□□□□ -0
TIMP2-203ENST00000585421 UBTFP17480 764 aaKnown RBP15.04■□□□□ -0
TIMP2-203ENST00000585421 RANGAP1P46060 587 aaPredicted RBP15.04■□□□□ -0
TIMP2-203ENST00000585421 CUX2O14529 1486 aa15.04■□□□□ -0
TIMP2-203ENST00000585421 DNMBPQ6XZF7 1577 aa15.04■□□□□ -0
TIMP2-203ENST00000585421 POLA1P09884 1462 aaPredicted RBP15.03■□□□□ -0
TIMP2-203ENST00000585421 TTBK1Q5TCY1 1321 aaPredicted RBP15.01□□□□□ -0.01
TIMP2-203ENST00000585421 EEA1Q15075 1411 aa14.99□□□□□ -0.01
TIMP2-203ENST00000585421 KIF27Q86VH2 1401 aa14.98□□□□□ -0.01
TIMP2-203ENST00000585421 TDRD9Q8NDG6 1382 aaKnown RBP14.97□□□□□ -0.01
TIMP2-203ENST00000585421 MRC2Q9UBG0 1479 aa14.96□□□□□ -0.02
TIMP2-203ENST00000585421 RAPGEF2Q9Y4G8 1499 aa14.96□□□□□ -0.02
TIMP2-203ENST00000585421 GOLGA3Q08378 1498 aa14.91□□□□□ -0.02
TIMP2-203ENST00000585421 IGF1RP08069 1367 aa14.89□□□□□ -0.03
TIMP2-203ENST00000585421 ABCA10Q8WWZ4 1543 aa14.87□□□□□ -0.03
TIMP2-203ENST00000585421 AQRO60306 1485 aaKnown RBP eCLIP14.85□□□□□ -0.03
TIMP2-203ENST00000585421 CEP162Q5TB80 1403 aa14.85□□□□□ -0.03
TIMP2-203ENST00000585421 PRXQ9BXM0 1461 aa14.85□□□□□ -0.03
TIMP2-203ENST00000585421 KIF21BO75037 1637 aa14.84□□□□□ -0.03
TIMP2-203ENST00000585421 ZNF608Q9ULD9 1512 aaPredicted RBP14.84□□□□□ -0.03
TIMP2-203ENST00000585421 TNIKQ9UKE5 1360 aa14.83□□□□□ -0.03
TIMP2-203ENST00000585421 WDR62O43379 1518 aa14.83□□□□□ -0.03
TIMP2-203ENST00000585421 THOC2Q8NI27 1593 aaKnown RBP14.83□□□□□ -0.04
TIMP2-203ENST00000585421 CARMIL1Q5VZK9 1371 aa14.83□□□□□ -0.04
TIMP2-203ENST00000585421 ACIN1Q9UKV3 1341 aaKnown RBP14.81□□□□□ -0.04
TIMP2-203ENST00000585421 TARBP1Q13395 1621 aaKnown RBP14.81□□□□□ -0.04
TIMP2-203ENST00000585421 GAPVD1Q14C86 1478 aa14.81□□□□□ -0.04
TIMP2-203ENST00000585421 WDR97A6NE52 1622 aa14.78□□□□□ -0.04
TIMP2-203ENST00000585421 GTF3C3Q9Y5Q9 886 aa14.77□□□□□ -0.04
TIMP2-203ENST00000585421 NEUROD1Q13562 356 aa14.75□□□□□ -0.05
TIMP2-203ENST00000585421 ABCA5Q8WWZ7 1642 aa14.75□□□□□ -0.05
TIMP2-203ENST00000585421 BCL11AQ9H165 835 aa14.74□□□□□ -0.05
TIMP2-203ENST00000585421 CLIP1P30622 1438 aa14.74□□□□□ -0.05
TIMP2-203ENST00000585421 IFT140Q96RY7 1462 aa14.73□□□□□ -0.05
TIMP2-203ENST00000585421 ERICH3Q5RHP9 1530 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms