RNA–Protein interactions for RNA: ENST00000585368.1

APPBP2-202, Transcript of amyloid beta precursor protein binding protein 2, humanhuman

TSL 3

Gene APPBP2, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APPBP2-202ENST00000585368 NISCHQ9Y2I1 1504 aa44.31■■■■■ 4.68
APPBP2-202ENST00000585368 CCDC180Q9P1Z9 1646 aa39.38■■■■□ 3.89
APPBP2-202ENST00000585368 ABCC9O60706 1549 aa38.19■■■■□ 3.7
APPBP2-202ENST00000585368 ZCCHC6Q5VYS8 1495 aaKnown RBP36.97■■■■□ 3.51
APPBP2-202ENST00000585368 NACADO15069 1562 aa36.94■■■■□ 3.5
APPBP2-202ENST00000585368 RB1CC1Q8TDY2 1594 aa36.92■■■■□ 3.5
APPBP2-202ENST00000585368 MYO15BQ96JP2 1530 aa36.83■■■■□ 3.49
APPBP2-202ENST00000585368 DCAF8L2P0C7V8 631 aa36.82■■■■□ 3.48
APPBP2-202ENST00000585368 DCAF1Q9Y4B6 1507 aa36.74■■■■□ 3.47
APPBP2-202ENST00000585368 UNC13AQ9UPW8 1703 aa36.08■■■■□ 3.37
APPBP2-202ENST00000585368 SCRIBQ14160 1630 aa35.85■■■■□ 3.33
APPBP2-202ENST00000585368 BICRAQ9NZM4 1560 aa35.76■■■■□ 3.31
APPBP2-202ENST00000585368 PABPN1Q86U42 306 aaKnown RBP eCLIP35.68■■■■□ 3.3
APPBP2-202ENST00000585368 SHROOM4Q9ULL8 1493 aa35.5■■■■□ 3.27
APPBP2-202ENST00000585368 EIF4G1Q04637 1599 aaKnown RBP34.81■■■■□ 3.16
APPBP2-202ENST00000585368 DNAJC5BQ9UF47 199 aa34.79■■■■□ 3.16
APPBP2-202ENST00000585368 CC2D2AQ9P2K1 1620 aa34.6■■■■□ 3.13
APPBP2-202ENST00000585368 CECR2Q9BXF3 1484 aa34.45■■■■□ 3.1
APPBP2-202ENST00000585368 BAZ1AQ9NRL2 1556 aaPredicted RBP34.36■■■■□ 3.09
APPBP2-202ENST00000585368 SMARCA4P51532 1647 aa34.36■■■■□ 3.09
APPBP2-202ENST00000585368 MROH2BQ7Z745 1585 aa34.13■■■■□ 3.05
APPBP2-202ENST00000585368 SMARCA2P51531 1590 aa34.11■■■■□ 3.05
APPBP2-202ENST00000585368 ATAD2BQ9ULI0 1458 aa34.08■■■■□ 3.05
APPBP2-202ENST00000585368 NCAPD3P42695 1498 aa34.06■■■■□ 3.04
APPBP2-202ENST00000585368 PEG3Q9GZU2 1588 aa34.05■■■■□ 3.04
APPBP2-202ENST00000585368 HMGXB3Q12766 1538 aa33.94■■■■□ 3.02
APPBP2-202ENST00000585368 BAZ1BQ9UIG0 1483 aaKnown RBP33.83■■■■□ 3.01
APPBP2-202ENST00000585368 RSF1Q96T23 1441 aaPredicted RBP33.81■■■■□ 3
APPBP2-202ENST00000585368 WIZO95785 1651 aa33.78■■■■□ 3
APPBP2-202ENST00000585368 TOP2AP11388 1531 aaKnown RBP33.47■■■□□ 2.95
APPBP2-202ENST00000585368 LAMC3Q9Y6N6 1575 aa33.15■■■□□ 2.9
APPBP2-202ENST00000585368 NESP48681 1621 aa33.1■■■□□ 2.89
APPBP2-202ENST00000585368 CADPSQ9ULU8 1353 aa33.06■■■□□ 2.88
APPBP2-202ENST00000585368 SUPT5HO00267 1087 aaKnown RBP33.05■■■□□ 2.88
APPBP2-202ENST00000585368 CCDC88BA6NC98 1476 aa33.03■■■□□ 2.88
APPBP2-202ENST00000585368 ERCC6Q03468 1493 aa32.93■■■□□ 2.86
APPBP2-202ENST00000585368 CFTRP13569 1480 aa32.92■■■□□ 2.86
APPBP2-202ENST00000585368 PDS5BQ9NTI5 1447 aa32.89■■■□□ 2.86
APPBP2-202ENST00000585368 KIF21AQ7Z4S6 1674 aa32.78■■■□□ 2.84
APPBP2-202ENST00000585368 PRDM2Q13029 1718 aa32.77■■■□□ 2.84
APPBP2-202ENST00000585368 FANCD2Q9BXW9 1451 aa32.67■■■□□ 2.82
APPBP2-202ENST00000585368 CEP164Q9UPV0 1460 aa32.63■■■□□ 2.81
APPBP2-202ENST00000585368 THOC2Q8NI27 1593 aaKnown RBP32.62■■■□□ 2.81
APPBP2-202ENST00000585368 CUX2O14529 1486 aa32.55■■■□□ 2.8
APPBP2-202ENST00000585368 MRC2Q9UBG0 1479 aa32.54■■■□□ 2.8
APPBP2-202ENST00000585368 WDR62O43379 1518 aa32.44■■■□□ 2.78
APPBP2-202ENST00000585368 URB2Q14146 1524 aaKnown RBP32.32■■■□□ 2.76
APPBP2-202ENST00000585368 ABCC8Q09428 1581 aa32.25■■■□□ 2.75
APPBP2-202ENST00000585368 DNMBPQ6XZF7 1577 aa32.19■■■□□ 2.74
APPBP2-202ENST00000585368 TOPBP1Q92547 1522 aa32.19■■■□□ 2.74
APPBP2-202ENST00000585368 CUX1P39880 1505 aa32■■■□□ 2.71
APPBP2-202ENST00000585368 IFT140Q96RY7 1462 aa31.95■■■□□ 2.7
APPBP2-202ENST00000585368 POLA1P09884 1462 aaPredicted RBP31.92■■■□□ 2.7
APPBP2-202ENST00000585368 WRNQ14191 1432 aaPredicted RBP eCLIP31.9■■■□□ 2.7
APPBP2-202ENST00000585368 FGD5Q6ZNL6 1462 aa31.87■■■□□ 2.69
APPBP2-202ENST00000585368 BIVM-ERCC5R4GMW8 1640 aa31.85■■■□□ 2.69
APPBP2-202ENST00000585368 TOP2BQ02880 1626 aa31.83■■■□□ 2.69
APPBP2-202ENST00000585368 TARBP1Q13395 1621 aaKnown RBP31.83■■■□□ 2.69
APPBP2-202ENST00000585368 SYNJ1O43426 1573 aa31.8■■■□□ 2.68
APPBP2-202ENST00000585368 SOGA1O94964 1423 aa31.78■■■□□ 2.68
APPBP2-202ENST00000585368 RAD54L2Q9Y4B4 1467 aa31.74■■■□□ 2.67
APPBP2-202ENST00000585368 ZNF608Q9ULD9 1512 aaPredicted RBP31.72■■■□□ 2.67
APPBP2-202ENST00000585368 EIF4G3O43432 1585 aaKnown RBP31.67■■■□□ 2.66
APPBP2-202ENST00000585368 WDR97A6NE52 1622 aa31.67■■■□□ 2.66
APPBP2-202ENST00000585368 ABCA10Q8WWZ4 1543 aa31.6■■■□□ 2.65
APPBP2-202ENST00000585368 AQRO60306 1485 aaKnown RBP eCLIP31.57■■■□□ 2.647e-6■■□□□ 13.1
APPBP2-202ENST00000585368 TDRD9Q8NDG6 1382 aaKnown RBP31.54■■■□□ 2.64
APPBP2-202ENST00000585368 ABCA5Q8WWZ7 1642 aa31.47■■■□□ 2.63
APPBP2-202ENST00000585368 GAPVD1Q14C86 1478 aa31.43■■■□□ 2.62
APPBP2-202ENST00000585368 GRIN2BQ13224 1484 aa31.41■■■□□ 2.62
APPBP2-202ENST00000585368 PBRM1Q86U86 1689 aa31.39■■■□□ 2.62
APPBP2-202ENST00000585368 MAGI1Q96QZ7 1491 aaPredicted RBP31.33■■■□□ 2.61
APPBP2-202ENST00000585368 SNAPC4Q5SXM2 1469 aa31.32■■■□□ 2.6
APPBP2-202ENST00000585368 TRIM41Q8WV44 630 aa31.26■■■□□ 2.59
APPBP2-202ENST00000585368 ERICH3Q5RHP9 1530 aa31.24■■■□□ 2.59
APPBP2-202ENST00000585368 CHD1O14646 1710 aa31.23■■■□□ 2.59
APPBP2-202ENST00000585368 KIF27Q86VH2 1401 aa31.23■■■□□ 2.59
APPBP2-202ENST00000585368 DNAJC5Q9H3Z4 198 aa31.22■■■□□ 2.59
APPBP2-202ENST00000585368 OSCARQ8IYS5 282 aa31.19■■■□□ 2.58
APPBP2-202ENST00000585368 SYNJ2O15056 1496 aa31.19■■■□□ 2.58
APPBP2-202ENST00000585368 ADAMTS12P58397 1594 aa31.14■■■□□ 2.58
APPBP2-202ENST00000585368 FBLN2P98095 1184 aa31.13■■■□□ 2.57
APPBP2-202ENST00000585368 CHMP7Q8WUX9 453 aaPredicted RBP31.11■■■□□ 2.57
APPBP2-202ENST00000585368 FHAD1B1AJZ9 1412 aa31.09■■■□□ 2.57
APPBP2-202ENST00000585368 IGF1RP08069 1367 aa31.04■■■□□ 2.56
APPBP2-202ENST00000585368 CUL7Q14999 1698 aa31.03■■■□□ 2.56
APPBP2-202ENST00000585368 GRIN2AQ12879 1464 aa31.01■■■□□ 2.55
APPBP2-202ENST00000585368 CHIC1Q5VXU3 224 aa31■■■□□ 2.55
APPBP2-202ENST00000585368 RUSC2Q8N2Y8 1516 aa30.93■■■□□ 2.54
APPBP2-202ENST00000585368 CLASP1Q7Z460 1538 aa30.89■■■□□ 2.54
APPBP2-202ENST00000585368 CARMIL1Q5VZK9 1371 aa30.87■■■□□ 2.53
APPBP2-202ENST00000585368 NUP160Q12769 1436 aa30.86■■■□□ 2.53
APPBP2-202ENST00000585368 CEP170Q5SW79 1584 aa30.83■■■□□ 2.53
APPBP2-202ENST00000585368 EEA1Q15075 1411 aa30.81■■■□□ 2.52
APPBP2-202ENST00000585368 RAPGEF2Q9Y4G8 1499 aa30.73■■■□□ 2.51
APPBP2-202ENST00000585368 ARHGEF11O15085 1522 aa30.7■■■□□ 2.51
APPBP2-202ENST00000585368 RIMBP3CA6NJZ7 1639 aa30.69■■■□□ 2.5
APPBP2-202ENST00000585368 RIMBP3BA6NNM3 1639 aa30.69■■■□□ 2.5
APPBP2-202ENST00000585368 RIMBP3Q9UFD9 1639 aa30.69■■■□□ 2.5
APPBP2-202ENST00000585368 PRXQ9BXM0 1461 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms