RNA–Protein interactions for RNA: ENST00000585217.5

MPDU1-227, Transcript of mannose-P-dolichol utilization defect 1, humanhuman

TSL 3

Gene MPDU1, Length 438 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MPDU1-227ENST00000585217 NISCHQ9Y2I1 1504 aa29.72■■■□□ 2.35
MPDU1-227ENST00000585217 ABCC9O60706 1549 aa26.6■■□□□ 1.85
MPDU1-227ENST00000585217 CCDC180Q9P1Z9 1646 aa26.57■■□□□ 1.84
MPDU1-227ENST00000585217 RB1CC1Q8TDY2 1594 aa25.3■■□□□ 1.64
MPDU1-227ENST00000585217 DCAF8L2P0C7V8 631 aa25.17■■□□□ 1.62
MPDU1-227ENST00000585217 NACADO15069 1562 aa25.15■■□□□ 1.62
MPDU1-227ENST00000585217 DNAJC5BQ9UF47 199 aa24.94■■□□□ 1.58
MPDU1-227ENST00000585217 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.572e-7■■■□□ 15
MPDU1-227ENST00000585217 MYO15BQ96JP2 1530 aa24.81■■□□□ 1.56
MPDU1-227ENST00000585217 UNC13AQ9UPW8 1703 aa24.71■■□□□ 1.55
MPDU1-227ENST00000585217 ZCCHC6Q5VYS8 1495 aaKnown RBP24.63■■□□□ 1.53
MPDU1-227ENST00000585217 BICRAQ9NZM4 1560 aa24.57■■□□□ 1.52
MPDU1-227ENST00000585217 DCAF1Q9Y4B6 1507 aa24.52■■□□□ 1.52
MPDU1-227ENST00000585217 SCRIBQ14160 1630 aa24.28■■□□□ 1.48
MPDU1-227ENST00000585217 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
MPDU1-227ENST00000585217 CC2D2AQ9P2K1 1620 aa24■■□□□ 1.43
MPDU1-227ENST00000585217 EIF4G1Q04637 1599 aaKnown RBP23.96■■□□□ 1.43
MPDU1-227ENST00000585217 CECR2Q9BXF3 1484 aa23.94■■□□□ 1.42
MPDU1-227ENST00000585217 NCAPD3P42695 1498 aa23.24■■□□□ 1.31
MPDU1-227ENST00000585217 ATAD2BQ9ULI0 1458 aa23.18■■□□□ 1.3
MPDU1-227ENST00000585217 SMARCA4P51532 1647 aa23.15■■□□□ 1.3
MPDU1-227ENST00000585217 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
MPDU1-227ENST00000585217 BAZ1AQ9NRL2 1556 aaPredicted RBP23.05■■□□□ 1.28
MPDU1-227ENST00000585217 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
MPDU1-227ENST00000585217 BAZ1BQ9UIG0 1483 aaKnown RBP22.96■■□□□ 1.27
MPDU1-227ENST00000585217 ERCC6Q03468 1493 aa22.95■■□□□ 1.26
MPDU1-227ENST00000585217 MROH2BQ7Z745 1585 aa22.92■■□□□ 1.26
MPDU1-227ENST00000585217 PEG3Q9GZU2 1588 aa22.91■■□□□ 1.26
MPDU1-227ENST00000585217 NESP48681 1621 aa22.87■■□□□ 1.25
MPDU1-227ENST00000585217 CUX2O14529 1486 aa22.85■■□□□ 1.25
MPDU1-227ENST00000585217 DNAJC5Q9H3Z4 198 aa22.83■■□□□ 1.25
MPDU1-227ENST00000585217 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
MPDU1-227ENST00000585217 WIZO95785 1651 aa22.64■■□□□ 1.21
MPDU1-227ENST00000585217 PDS5BQ9NTI5 1447 aa22.57■■□□□ 1.2
MPDU1-227ENST00000585217 THOC2Q8NI27 1593 aaKnown RBP22.57■■□□□ 1.2
MPDU1-227ENST00000585217 CADPSQ9ULU8 1353 aa22.56■■□□□ 1.2
MPDU1-227ENST00000585217 KIF21AQ7Z4S6 1674 aa22.53■■□□□ 1.2
MPDU1-227ENST00000585217 RSF1Q96T23 1441 aaPredicted RBP22.48■■□□□ 1.19
MPDU1-227ENST00000585217 MRC2Q9UBG0 1479 aa22.37■■□□□ 1.17
MPDU1-227ENST00000585217 TOP2AP11388 1531 aaKnown RBP22.33■■□□□ 1.17
MPDU1-227ENST00000585217 CFTRP13569 1480 aa22.29■■□□□ 1.16
MPDU1-227ENST00000585217 CEP164Q9UPV0 1460 aa22.29■■□□□ 1.16
MPDU1-227ENST00000585217 WDR62O43379 1518 aa22.29■■□□□ 1.16
MPDU1-227ENST00000585217 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
MPDU1-227ENST00000585217 SUPT5HO00267 1087 aaKnown RBP22.28■■□□□ 1.16
MPDU1-227ENST00000585217 CCDC88BA6NC98 1476 aa22.12■■□□□ 1.13
MPDU1-227ENST00000585217 URB2Q14146 1524 aaKnown RBP22.09■■□□□ 1.13
MPDU1-227ENST00000585217 PRDM2Q13029 1718 aa22.01■■□□□ 1.11
MPDU1-227ENST00000585217 OSCARQ8IYS5 282 aa21.9■■□□□ 1.1
MPDU1-227ENST00000585217 TRIM41Q8WV44 630 aa21.89■■□□□ 1.09
MPDU1-227ENST00000585217 TOPBP1Q92547 1522 aa21.86■■□□□ 1.09
MPDU1-227ENST00000585217 IFT140Q96RY7 1462 aa21.84■■□□□ 1.09
MPDU1-227ENST00000585217 ZNF608Q9ULD9 1512 aaPredicted RBP21.82■■□□□ 1.08
MPDU1-227ENST00000585217 ABCC8Q09428 1581 aa21.82■■□□□ 1.08
MPDU1-227ENST00000585217 DNMBPQ6XZF7 1577 aa21.77■■□□□ 1.08
MPDU1-227ENST00000585217 EIF4G3O43432 1585 aaKnown RBP21.65■■□□□ 1.06
MPDU1-227ENST00000585217 AQRO60306 1485 aaKnown RBP eCLIP21.65■■□□□ 1.062e-6■■■■■ 43
MPDU1-227ENST00000585217 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.06
MPDU1-227ENST00000585217 TARBP1Q13395 1621 aaKnown RBP21.64■■□□□ 1.05
MPDU1-227ENST00000585217 RAD54L2Q9Y4B4 1467 aa21.59■■□□□ 1.05
MPDU1-227ENST00000585217 SOGA1O94964 1423 aa21.58■■□□□ 1.05
MPDU1-227ENST00000585217 TDRD9Q8NDG6 1382 aaKnown RBP21.54■■□□□ 1.04
MPDU1-227ENST00000585217 RIMBP3CA6NJZ7 1639 aa21.54■■□□□ 1.04
MPDU1-227ENST00000585217 RIMBP3BA6NNM3 1639 aa21.54■■□□□ 1.04
MPDU1-227ENST00000585217 RIMBP3Q9UFD9 1639 aa21.54■■□□□ 1.04
MPDU1-227ENST00000585217 FGD5Q6ZNL6 1462 aa21.53■■□□□ 1.04
MPDU1-227ENST00000585217 FBLN2P98095 1184 aa21.53■■□□□ 1.04
MPDU1-227ENST00000585217 CUX1P39880 1505 aa21.52■■□□□ 1.04
MPDU1-227ENST00000585217 CHD1O14646 1710 aa21.49■■□□□ 1.03
MPDU1-227ENST00000585217 ARHGEF11O15085 1522 aa21.49■■□□□ 1.03
MPDU1-227ENST00000585217 SNAPC4Q5SXM2 1469 aa21.41■■□□□ 1.02
MPDU1-227ENST00000585217 CYB5RLQ6IPT4 315 aa21.4■■□□□ 1.02
MPDU1-227ENST00000585217 WDR97A6NE52 1622 aa21.4■■□□□ 1.02
MPDU1-227ENST00000585217 CHMP7Q8WUX9 453 aaPredicted RBP21.38■■□□□ 1.01
MPDU1-227ENST00000585217 GRIN2BQ13224 1484 aa21.36■■□□□ 1.01
MPDU1-227ENST00000585217 CHIC1Q5VXU3 224 aa21.35■■□□□ 1.01
MPDU1-227ENST00000585217 MAGI1Q96QZ7 1491 aaPredicted RBP21.33■■□□□ 1.01
MPDU1-227ENST00000585217 GAPVD1Q14C86 1478 aa21.31■■□□□ 1
MPDU1-227ENST00000585217 ARAP1Q96P48 1450 aa21.29■■□□□ 1
MPDU1-227ENST00000585217 ABCA10Q8WWZ4 1543 aa21.28■■□□□ 1
MPDU1-227ENST00000585217 SYNJ2O15056 1496 aa21.27■■□□□ 1
MPDU1-227ENST00000585217 CLASP1Q7Z460 1538 aa21.25■□□□□ 0.99
MPDU1-227ENST00000585217 SYNJ1O43426 1573 aa21.25■□□□□ 0.99
MPDU1-227ENST00000585217 PBRM1Q86U86 1689 aa21.24■□□□□ 0.99
MPDU1-227ENST00000585217 WRNQ14191 1432 aaPredicted RBP eCLIP21.22■□□□□ 0.99
MPDU1-227ENST00000585217 ABCA5Q8WWZ7 1642 aa21.21■□□□□ 0.99
MPDU1-227ENST00000585217 TOP2BQ02880 1626 aa21.17■□□□□ 0.98
MPDU1-227ENST00000585217 BIVM-ERCC5R4GMW8 1640 aa21.15■□□□□ 0.98
MPDU1-227ENST00000585217 TRHP20396 242 aaPredicted RBP21.14■□□□□ 0.97
MPDU1-227ENST00000585217 GRIN2AQ12879 1464 aa21.07■□□□□ 0.96
MPDU1-227ENST00000585217 ADAMTS12P58397 1594 aa21.05■□□□□ 0.96
MPDU1-227ENST00000585217 FHAD1B1AJZ9 1412 aa21.04■□□□□ 0.96
MPDU1-227ENST00000585217 NUP160Q12769 1436 aa21.01■□□□□ 0.95
MPDU1-227ENST00000585217 ERICH3Q5RHP9 1530 aa21■□□□□ 0.95
MPDU1-227ENST00000585217 CEP170Q5SW79 1584 aa20.99■□□□□ 0.95
MPDU1-227ENST00000585217 ERCC6L2Q5T890 1561 aa20.96■□□□□ 0.95
MPDU1-227ENST00000585217 SHROOM2Q13796 1616 aa20.87■□□□□ 0.93
MPDU1-227ENST00000585217 JPH4Q96JJ6 628 aa20.86■□□□□ 0.93
MPDU1-227ENST00000585217 PRG4Q92954 1404 aaPredicted RBP20.82■□□□□ 0.92
MPDU1-227ENST00000585217 IGF1RP08069 1367 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms