RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 NISCHQ9Y2I1 1504 aa26.25■■□□□ 1.79
CASC3-210ENST00000584997 ABCC9O60706 1549 aa23.8■■□□□ 1.4
CASC3-210ENST00000584997 CCDC180Q9P1Z9 1646 aa23.66■■□□□ 1.38
CASC3-210ENST00000584997 RB1CC1Q8TDY2 1594 aa22.61■■□□□ 1.21
CASC3-210ENST00000584997 DNAJC5BQ9UF47 199 aa22.4■■□□□ 1.18
CASC3-210ENST00000584997 NACADO15069 1562 aa22.39■■□□□ 1.18
CASC3-210ENST00000584997 DCAF8L2P0C7V8 631 aa22.27■■□□□ 1.16
CASC3-210ENST00000584997 PABPN1Q86U42 306 aaKnown RBP eCLIP22.12■■□□□ 1.13
CASC3-210ENST00000584997 UNC13AQ9UPW8 1703 aa22.11■■□□□ 1.13
CASC3-210ENST00000584997 MYO15BQ96JP2 1530 aa22.01■■□□□ 1.11
CASC3-210ENST00000584997 BICRAQ9NZM4 1560 aa21.91■■□□□ 1.1
CASC3-210ENST00000584997 ZCCHC6Q5VYS8 1495 aaKnown RBP21.73■■□□□ 1.07
CASC3-210ENST00000584997 DCAF1Q9Y4B6 1507 aa21.67■■□□□ 1.06
CASC3-210ENST00000584997 SHROOM4Q9ULL8 1493 aa21.63■■□□□ 1.05
CASC3-210ENST00000584997 SCRIBQ14160 1630 aa21.56■■□□□ 1.04
CASC3-210ENST00000584997 CC2D2AQ9P2K1 1620 aa21.51■■□□□ 1.03
CASC3-210ENST00000584997 CECR2Q9BXF3 1484 aa21.46■■□□□ 1.03
CASC3-210ENST00000584997 EIF4G1Q04637 1599 aaKnown RBP21.41■■□□□ 1.02
CASC3-210ENST00000584997 DNAJC5Q9H3Z4 198 aa20.71■□□□□ 0.91
CASC3-210ENST00000584997 NCAPD3P42695 1498 aa20.65■□□□□ 0.9
CASC3-210ENST00000584997 ERCC6Q03468 1493 aa20.6■□□□□ 0.89
CASC3-210ENST00000584997 CUX2O14529 1486 aa20.59■□□□□ 0.89
CASC3-210ENST00000584997 ATAD2BQ9ULI0 1458 aa20.57■□□□□ 0.88
CASC3-210ENST00000584997 SMARCA4P51532 1647 aa20.54■□□□□ 0.88
CASC3-210ENST00000584997 SMARCA2P51531 1590 aa20.54■□□□□ 0.88
CASC3-210ENST00000584997 HMGXB3Q12766 1538 aa20.52■□□□□ 0.87
CASC3-210ENST00000584997 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
CASC3-210ENST00000584997 BAZ1BQ9UIG0 1483 aaKnown RBP20.4■□□□□ 0.86
CASC3-210ENST00000584997 NESP48681 1621 aa20.39■□□□□ 0.86
CASC3-210ENST00000584997 PEG3Q9GZU2 1588 aa20.31■□□□□ 0.84
CASC3-210ENST00000584997 LAMC3Q9Y6N6 1575 aa20.25■□□□□ 0.83
CASC3-210ENST00000584997 THOC2Q8NI27 1593 aaKnown RBP20.24■□□□□ 0.83
CASC3-210ENST00000584997 MROH2BQ7Z745 1585 aa20.23■□□□□ 0.83
CASC3-210ENST00000584997 KIF21AQ7Z4S6 1674 aa20.16■□□□□ 0.82
CASC3-210ENST00000584997 PDS5BQ9NTI5 1447 aa20.13■□□□□ 0.81
CASC3-210ENST00000584997 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
CASC3-210ENST00000584997 WIZO95785 1651 aa20■□□□□ 0.79
CASC3-210ENST00000584997 MRC2Q9UBG0 1479 aa19.97■□□□□ 0.79
CASC3-210ENST00000584997 WDR62O43379 1518 aa19.92■□□□□ 0.78
CASC3-210ENST00000584997 CEP164Q9UPV0 1460 aa19.87■□□□□ 0.77
CASC3-210ENST00000584997 FANCD2Q9BXW9 1451 aa19.82■□□□□ 0.76
CASC3-210ENST00000584997 TRIM41Q8WV44 630 aa19.8■□□□□ 0.76
CASC3-210ENST00000584997 CFTRP13569 1480 aa19.76■□□□□ 0.75
CASC3-210ENST00000584997 RSF1Q96T23 1441 aaPredicted RBP19.74■□□□□ 0.75
CASC3-210ENST00000584997 TOP2AP11388 1531 aaKnown RBP19.73■□□□□ 0.75
CASC3-210ENST00000584997 URB2Q14146 1524 aaKnown RBP19.65■□□□□ 0.74
CASC3-210ENST00000584997 PRDM2Q13029 1718 aa19.62■□□□□ 0.73
CASC3-210ENST00000584997 OSCARQ8IYS5 282 aa19.61■□□□□ 0.73
CASC3-210ENST00000584997 CCDC88BA6NC98 1476 aa19.49■□□□□ 0.71
CASC3-210ENST00000584997 IFT140Q96RY7 1462 aa19.46■□□□□ 0.71
CASC3-210ENST00000584997 ZNF608Q9ULD9 1512 aaPredicted RBP19.43■□□□□ 0.7
CASC3-210ENST00000584997 TOPBP1Q92547 1522 aa19.42■□□□□ 0.7
CASC3-210ENST00000584997 RIMBP3CA6NJZ7 1639 aa19.4■□□□□ 0.7
CASC3-210ENST00000584997 RIMBP3BA6NNM3 1639 aa19.4■□□□□ 0.7
CASC3-210ENST00000584997 RIMBP3Q9UFD9 1639 aa19.4■□□□□ 0.7
CASC3-210ENST00000584997 ABCC8Q09428 1581 aa19.37■□□□□ 0.69
CASC3-210ENST00000584997 EIF4G3O43432 1585 aaKnown RBP19.35■□□□□ 0.69
CASC3-210ENST00000584997 DNMBPQ6XZF7 1577 aa19.35■□□□□ 0.69
CASC3-210ENST00000584997 ARHGEF11O15085 1522 aa19.31■□□□□ 0.68
CASC3-210ENST00000584997 TARBP1Q13395 1621 aaKnown RBP19.25■□□□□ 0.67
CASC3-210ENST00000584997 CHD1O14646 1710 aa19.25■□□□□ 0.67
CASC3-210ENST00000584997 AQRO60306 1485 aaKnown RBP eCLIP19.24■□□□□ 0.672e-7■■■■□ 21.9
CASC3-210ENST00000584997 POLA1P09884 1462 aaPredicted RBP19.21■□□□□ 0.67
CASC3-210ENST00000584997 FBLN2P98095 1184 aa19.18■□□□□ 0.66
CASC3-210ENST00000584997 CYB5RLQ6IPT4 315 aa19.16■□□□□ 0.66
CASC3-210ENST00000584997 RAD54L2Q9Y4B4 1467 aa19.14■□□□□ 0.65
CASC3-210ENST00000584997 SOGA1O94964 1423 aa19.11■□□□□ 0.65
CASC3-210ENST00000584997 ARAP1Q96P48 1450 aa19.09■□□□□ 0.65
CASC3-210ENST00000584997 TDRD9Q8NDG6 1382 aaKnown RBP19.09■□□□□ 0.65
CASC3-210ENST00000584997 FGD5Q6ZNL6 1462 aa19.08■□□□□ 0.64
CASC3-210ENST00000584997 WDR97A6NE52 1622 aa19.07■□□□□ 0.64
CASC3-210ENST00000584997 SNAPC4Q5SXM2 1469 aa19.06■□□□□ 0.64
CASC3-210ENST00000584997 TRHP20396 242 aaPredicted RBP19.04■□□□□ 0.64
CASC3-210ENST00000584997 CUX1P39880 1505 aa19.02■□□□□ 0.64
CASC3-210ENST00000584997 MAGI1Q96QZ7 1491 aaPredicted RBP19■□□□□ 0.63
CASC3-210ENST00000584997 SYNJ1O43426 1573 aa19■□□□□ 0.63
CASC3-210ENST00000584997 CHMP7Q8WUX9 453 aaPredicted RBP18.99■□□□□ 0.63
CASC3-210ENST00000584997 CLASP1Q7Z460 1538 aa18.99■□□□□ 0.63
CASC3-210ENST00000584997 GRIN2BQ13224 1484 aa18.98■□□□□ 0.63
CASC3-210ENST00000584997 PBRM1Q86U86 1689 aa18.93■□□□□ 0.62
CASC3-210ENST00000584997 SYNJ2O15056 1496 aa18.93■□□□□ 0.62
CASC3-210ENST00000584997 GAPVD1Q14C86 1478 aa18.9■□□□□ 0.62
CASC3-210ENST00000584997 ABCA10Q8WWZ4 1543 aa18.84■□□□□ 0.61
CASC3-210ENST00000584997 ABCA5Q8WWZ7 1642 aa18.84■□□□□ 0.61
CASC3-210ENST00000584997 SUPT5HO00267 1087 aaKnown RBP18.78■□□□□ 0.6
CASC3-210ENST00000584997 WRNQ14191 1432 aaPredicted RBP eCLIP18.74■□□□□ 0.59
CASC3-210ENST00000584997 GRIN2AQ12879 1464 aa18.74■□□□□ 0.59
CASC3-210ENST00000584997 ADAMTS12P58397 1594 aa18.72■□□□□ 0.59
CASC3-210ENST00000584997 TOP2BQ02880 1626 aa18.69■□□□□ 0.58
CASC3-210ENST00000584997 BIVM-ERCC5R4GMW8 1640 aa18.69■□□□□ 0.58
CASC3-210ENST00000584997 CEP170Q5SW79 1584 aa18.68■□□□□ 0.58
CASC3-210ENST00000584997 ERCC6L2Q5T890 1561 aa18.68■□□□□ 0.58
CASC3-210ENST00000584997 NUP160Q12769 1436 aa18.66■□□□□ 0.58
CASC3-210ENST00000584997 FHAD1B1AJZ9 1412 aa18.64■□□□□ 0.57
CASC3-210ENST00000584997 SHROOM2Q13796 1616 aa18.61■□□□□ 0.57
CASC3-210ENST00000584997 ERICH3Q5RHP9 1530 aa18.61■□□□□ 0.57
CASC3-210ENST00000584997 AEBP2Q6ZN18 517 aaPredicted RBP18.61■□□□□ 0.57
CASC3-210ENST00000584997 PRG4Q92954 1404 aaPredicted RBP18.51■□□□□ 0.55
CASC3-210ENST00000584997 KIF13AQ9H1H9 1805 aa18.47■□□□□ 0.55
CASC3-210ENST00000584997 JPH4Q96JJ6 628 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms